RNA–Protein interactions for RNA: ENST00000355192.7

MSRB3-202, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 1 (best) BASIC

Gene MSRB3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-202ENST00000355192 SPG7Q9UQ90 795 aa16.56■□□□□ 0.24
MSRB3-202ENST00000355192 HOOK1Q9UJC3 728 aaKnown RBP16.55■□□□□ 0.24
MSRB3-202ENST00000355192 ZKSCAN5Q9Y2L8 839 aa16.55■□□□□ 0.24
MSRB3-202ENST00000355192 STX6O43752 255 aa16.55■□□□□ 0.24
MSRB3-202ENST00000355192 PUS7Q96PZ0 661 aaKnown RBP16.55■□□□□ 0.24
MSRB3-202ENST00000355192 TRIM35Q9UPQ4 493 aa16.54■□□□□ 0.24
MSRB3-202ENST00000355192 DDX11Q96FC9 970 aa16.54■□□□□ 0.24
MSRB3-202ENST00000355192 TAF7Q15545 349 aaPredicted RBP16.53■□□□□ 0.24
MSRB3-202ENST00000355192 TSR1Q2NL82 804 aaKnown RBP16.53■□□□□ 0.24
MSRB3-202ENST00000355192 PDILTQ8N807 584 aa16.53■□□□□ 0.24
MSRB3-202ENST00000355192 SH2B1Q9NRF2 756 aaPredicted RBP16.53■□□□□ 0.24
MSRB3-202ENST00000355192 CBX1P83916 185 aa16.53■□□□□ 0.24
MSRB3-202ENST00000355192 CFAP45Q9UL16 551 aa16.53■□□□□ 0.24
MSRB3-202ENST00000355192 DENND4BO75064 1496 aaPredicted RBP16.53■□□□□ 0.24
MSRB3-202ENST00000355192 A0A1W2PP64 1363 aa16.53■□□□□ 0.24
MSRB3-202ENST00000355192 DYNC1I1O14576 645 aa16.53■□□□□ 0.24
MSRB3-202ENST00000355192 KDM4AO75164 1064 aa16.53■□□□□ 0.24
MSRB3-202ENST00000355192 KRT24Q2M2I5 525 aa16.53■□□□□ 0.24
MSRB3-202ENST00000355192 ESYT1Q9BSJ8 1104 aa16.53■□□□□ 0.24
MSRB3-202ENST00000355192 OFD1O75665 1012 aa16.53■□□□□ 0.24
MSRB3-202ENST00000355192 PDIA4P13667 645 aaKnown RBP16.53■□□□□ 0.24
MSRB3-202ENST00000355192 OLFM4Q6UX06 510 aa16.53■□□□□ 0.24
MSRB3-202ENST00000355192 CKAP2LQ8IYA6 745 aa16.53■□□□□ 0.24
MSRB3-202ENST00000355192 ZNF830Q96NB3 372 aaPredicted RBP16.53■□□□□ 0.24
MSRB3-202ENST00000355192 USP26Q9BXU7 913 aa16.53■□□□□ 0.24
MSRB3-202ENST00000355192 ADGBQ8N7X0 1667 aa16.52■□□□□ 0.24
MSRB3-202ENST00000355192 SCAND2PQ9GZW5 306 aaPredicted RBP16.52■□□□□ 0.24
MSRB3-202ENST00000355192 MBD5Q9P267 1494 aa16.52■□□□□ 0.23
MSRB3-202ENST00000355192 SAFBQ15424 915 aaKnown RBP eCLIP16.52■□□□□ 0.23
MSRB3-202ENST00000355192 CEP85Q6P2H3 762 aa16.52■□□□□ 0.23
MSRB3-202ENST00000355192 A0A0U1RQG5 324 aaPredicted RBP16.51■□□□□ 0.23
MSRB3-202ENST00000355192 UBE2HP62256 183 aa16.51■□□□□ 0.23
MSRB3-202ENST00000355192 BTBD11A6QL63 1104 aa16.51■□□□□ 0.23
MSRB3-202ENST00000355192 CEP57L1Q8IYX8 460 aa16.51■□□□□ 0.23
MSRB3-202ENST00000355192 KRT32Q14532 448 aa16.5■□□□□ 0.23
MSRB3-202ENST00000355192 GIMAP6Q6P9H5 292 aa16.5■□□□□ 0.23
MSRB3-202ENST00000355192 BOLA2Q9H3K6 86 aa16.5■□□□□ 0.23
MSRB3-202ENST00000355192 ZRANB1Q9UGI0 708 aa16.5■□□□□ 0.23
MSRB3-202ENST00000355192 GJB2P29033 226 aa16.5■□□□□ 0.23
MSRB3-202ENST00000355192 UVSSAQ2YD98 709 aa16.5■□□□□ 0.23
MSRB3-202ENST00000355192 MYL6BP14649 208 aa16.5■□□□□ 0.23
MSRB3-202ENST00000355192 AEBP2Q6ZN18 517 aaPredicted RBP16.5■□□□□ 0.23
MSRB3-202ENST00000355192 PPP1R42Q7Z4L9 355 aa16.5■□□□□ 0.23
MSRB3-202ENST00000355192 USP48Q86UV5 1035 aa16.5■□□□□ 0.23
MSRB3-202ENST00000355192 OTUD7AQ8TE49 926 aaPredicted RBP16.5■□□□□ 0.23
MSRB3-202ENST00000355192 TFIP11Q9UBB9 837 aaKnown RBP16.5■□□□□ 0.23
MSRB3-202ENST00000355192 HS1BP3Q53T59 392 aa16.5■□□□□ 0.23
MSRB3-202ENST00000355192 PTPRTO14522 1441 aa16.49■□□□□ 0.23
MSRB3-202ENST00000355192 DHX16O60231 1041 aaKnown RBP16.49■□□□□ 0.23
MSRB3-202ENST00000355192 HSP90AB2PQ58FF8 381 aa16.49■□□□□ 0.23
MSRB3-202ENST00000355192 RBSNQ9H1K0 784 aa16.49■□□□□ 0.23
MSRB3-202ENST00000355192 ANAPC15P60006 121 aa16.49■□□□□ 0.23
MSRB3-202ENST00000355192 DNAAF4Q8WXU2 420 aa16.49■□□□□ 0.23
MSRB3-202ENST00000355192 BCORL1Q5H9F3 1711 aa16.49■□□□□ 0.23
MSRB3-202ENST00000355192 PBRM1Q86U86 1689 aa16.48■□□□□ 0.23
MSRB3-202ENST00000355192 CCDC66A2RUB6 948 aa16.48■□□□□ 0.23
MSRB3-202ENST00000355192 ESCO1Q5FWF5 840 aa16.48■□□□□ 0.23
MSRB3-202ENST00000355192 CNPY2Q9Y2B0 182 aa16.48■□□□□ 0.23
MSRB3-202ENST00000355192 MAST1Q9Y2H9 1570 aa16.48■□□□□ 0.23
MSRB3-202ENST00000355192 ZSCAN22P10073 491 aaPredicted RBP16.48■□□□□ 0.23
MSRB3-202ENST00000355192 ATP2B1P20020 1258 aa16.48■□□□□ 0.23
MSRB3-202ENST00000355192 ANKRD20A12PQ8NF67 263 aa16.48■□□□□ 0.23
MSRB3-202ENST00000355192 C16orf45Q96MC5 204 aaPredicted RBP16.48■□□□□ 0.23
MSRB3-202ENST00000355192 CCDC8Q9H0W5 538 aaPredicted RBP16.48■□□□□ 0.23
MSRB3-202ENST00000355192 TTC12Q9H892 705 aaPredicted RBP16.48■□□□□ 0.23
MSRB3-202ENST00000355192 USHBP1Q8N6Y0 703 aa16.48■□□□□ 0.23
MSRB3-202ENST00000355192 PODXL2Q9NZ53 605 aa16.48■□□□□ 0.23
MSRB3-202ENST00000355192 SERPINC1P01008 464 aa16.47■□□□□ 0.23
MSRB3-202ENST00000355192 ECHDC1Q9NTX5 307 aa16.47■□□□□ 0.23
MSRB3-202ENST00000355192 IPO7O95373 1038 aaKnown RBP16.47■□□□□ 0.23
MSRB3-202ENST00000355192 NOLC1Q14978 699 aaKnown RBP eCLIP16.47■□□□□ 0.23
MSRB3-202ENST00000355192 RHPN1Q8TCX5 695 aa16.47■□□□□ 0.23
MSRB3-202ENST00000355192 PRIMPOLQ96LW4 560 aa16.47■□□□□ 0.23
MSRB3-202ENST00000355192 ANTXR1Q9H6X2 564 aa16.47■□□□□ 0.23
MSRB3-202ENST00000355192 ABCC10Q5T3U5 1492 aa16.46■□□□□ 0.23
MSRB3-202ENST00000355192 ERICH2A1L162 156 aa16.45■□□□□ 0.22
MSRB3-202ENST00000355192 TNNT1P13805 278 aa16.45■□□□□ 0.22
MSRB3-202ENST00000355192 WDR7Q9Y4E6 1490 aa16.45■□□□□ 0.22
MSRB3-202ENST00000355192 TTC21BQ7Z4L5 1316 aa16.45■□□□□ 0.22
MSRB3-202ENST00000355192 ZMYM3Q14202 1370 aa16.45■□□□□ 0.22
MSRB3-202ENST00000355192 CCP110O43303 1012 aa16.45■□□□□ 0.22
MSRB3-202ENST00000355192 PTPN14Q15678 1187 aa16.45■□□□□ 0.22
MSRB3-202ENST00000355192 NOC3LQ8WTT2 800 aaKnown RBP16.45■□□□□ 0.22
MSRB3-202ENST00000355192 CLIP2Q9UDT6 1046 aa16.45■□□□□ 0.22
MSRB3-202ENST00000355192 ABCC2Q92887 1545 aa16.45■□□□□ 0.22
MSRB3-202ENST00000355192 FAM177A1Q8N128 213 aaPredicted RBP16.44■□□□□ 0.22
MSRB3-202ENST00000355192 DDX19AQ9NUU7 478 aaKnown RBP16.44■□□□□ 0.22
MSRB3-202ENST00000355192 EIF4A2Q14240 407 aaKnown RBP16.44■□□□□ 0.22
MSRB3-202ENST00000355192 NECAB1Q8N987 351 aa16.44■□□□□ 0.22
MSRB3-202ENST00000355192 JMYQ8N9B5 988 aa16.44■□□□□ 0.22
MSRB3-202ENST00000355192 PI4KAP2A4QPH2 592 aa16.44■□□□□ 0.22
MSRB3-202ENST00000355192 GTF2E1P29083 439 aaPredicted RBP16.44■□□□□ 0.22
MSRB3-202ENST00000355192 ZNF165P49910 485 aa16.44■□□□□ 0.22
MSRB3-202ENST00000355192 ATP8B2P98198 1209 aa16.44■□□□□ 0.22
MSRB3-202ENST00000355192 PPP4R3BQ5MIZ7 849 aa16.44■□□□□ 0.22
MSRB3-202ENST00000355192 PI4KAP1Q8N8J0 262 aa16.44■□□□□ 0.22
MSRB3-202ENST00000355192 ZNF445P59923 1031 aa16.43■□□□□ 0.22
MSRB3-202ENST00000355192 NCBP3Q53F19 620 aaKnown RBP16.43■□□□□ 0.22
MSRB3-202ENST00000355192 GAS2L3Q86XJ1 694 aa16.43■□□□□ 0.22
MSRB3-202ENST00000355192 EIF4G3O43432 1585 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms