RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 SLC12A5Q9H2X9 1139 aa13.44□□□□□ -0.26
SND1-201ENST00000354725 SRPK2P78362 688 aaKnown RBP13.44□□□□□ -0.26
SND1-201ENST00000354725 PCDHB15Q9Y5E8 787 aa13.44□□□□□ -0.26
SND1-201ENST00000354725 CT47B1P0C2W7 299 aaPredicted RBP13.44□□□□□ -0.26
SND1-201ENST00000354725 MCCP23508 829 aa13.44□□□□□ -0.26
SND1-201ENST00000354725 PANK1Q8TE04 598 aa13.44□□□□□ -0.26
SND1-201ENST00000354725 PLEKHF1Q96S99 279 aa13.44□□□□□ -0.26
SND1-201ENST00000354725 PMFBP1Q8TBY8 1022 aa13.43□□□□□ -0.26
SND1-201ENST00000354725 PEAK1Q9H792 1746 aa13.43□□□□□ -0.26
SND1-201ENST00000354725 TCP11L2Q8N4U5 519 aa13.43□□□□□ -0.26
SND1-201ENST00000354725 TBC1D32Q96NH3 1257 aa13.43□□□□□ -0.26
SND1-201ENST00000354725 ABCC6O95255 1503 aa13.43□□□□□ -0.26
SND1-201ENST00000354725 FOXO3O43524 673 aa13.43□□□□□ -0.26
SND1-201ENST00000354725 DNAJC2Q99543 621 aaKnown RBP13.43□□□□□ -0.26
SND1-201ENST00000354725 RGPD5Q99666 1765 aa13.42□□□□□ -0.26
SND1-201ENST00000354725 COL14A1Q05707 1796 aaKnown RBP13.41□□□□□ -0.26
SND1-201ENST00000354725 KRT28Q7Z3Y7 464 aa13.41□□□□□ -0.26
SND1-201ENST00000354725 JCADQ9P266 1359 aa13.41□□□□□ -0.26
SND1-201ENST00000354725 OFD1O75665 1012 aa13.41□□□□□ -0.26
SND1-201ENST00000354725 COG6Q9Y2V7 657 aa13.41□□□□□ -0.26
SND1-201ENST00000354725 MYH16Q9H6N6 1097 aa13.41□□□□□ -0.26
SND1-201ENST00000354725 CCDC94Q9BW85 323 aaPredicted RBP13.4□□□□□ -0.26
SND1-201ENST00000354725 CAMTA1Q9Y6Y1 1673 aa13.4□□□□□ -0.26
SND1-201ENST00000354725 WNK3Q9BYP7 1800 aa13.4□□□□□ -0.26
SND1-201ENST00000354725 TTC21BQ7Z4L5 1316 aa13.39□□□□□ -0.27
SND1-201ENST00000354725 DLG5Q8TDM6 1919 aa13.39□□□□□ -0.27
SND1-201ENST00000354725 MORC1Q86VD1 984 aa13.39□□□□□ -0.27
SND1-201ENST00000354725 TNNQ9UQP3 1299 aa13.39□□□□□ -0.27
SND1-201ENST00000354725 ARHGEF10O15013 1369 aa13.39□□□□□ -0.27
SND1-201ENST00000354725 IL16Q14005 1332 aa13.38□□□□□ -0.27
SND1-201ENST00000354725 TTC21AQ8NDW8 1320 aa13.38□□□□□ -0.27
SND1-201ENST00000354725 MTHFSP49914 203 aa13.38□□□□□ -0.27
SND1-201ENST00000354725 MRE11P49959 708 aa13.38□□□□□ -0.27
SND1-201ENST00000354725 MVPQ14764 893 aaKnown RBP13.38□□□□□ -0.27
SND1-201ENST00000354725 LRRC59Q96AG4 307 aaKnown RBP13.38□□□□□ -0.27
SND1-201ENST00000354725 CHMP4CQ96CF2 233 aa13.38□□□□□ -0.27
SND1-201ENST00000354725 TRIM44Q96DX7 344 aaPredicted RBP13.38□□□□□ -0.27
SND1-201ENST00000354725 MAP2P11137 1827 aaKnown RBP13.38□□□□□ -0.27
SND1-201ENST00000354725 HDAC1Q13547 482 aaPredicted RBP13.37□□□□□ -0.27
SND1-201ENST00000354725 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.37□□□□□ -0.27
SND1-201ENST00000354725 PSEN1P49768 467 aa13.37□□□□□ -0.27
SND1-201ENST00000354725 XPCQ01831 940 aaPredicted RBP13.37□□□□□ -0.27
SND1-201ENST00000354725 ZNF622Q969S3 477 aaKnown RBP eCLIP13.37□□□□□ -0.27
SND1-201ENST00000354725 SPATA31A6Q5VVP1 1343 aa13.36□□□□□ -0.27
SND1-201ENST00000354725 TRIM35Q9UPQ4 493 aa13.36□□□□□ -0.27
SND1-201ENST00000354725 PSME1Q06323 249 aa13.36□□□□□ -0.27
SND1-201ENST00000354725 SLC20A2Q08357 652 aa13.36□□□□□ -0.27
SND1-201ENST00000354725 PDZRN3Q9UPQ7 1066 aa13.36□□□□□ -0.27
SND1-201ENST00000354725 CPDO75976 1380 aa13.35□□□□□ -0.27
SND1-201ENST00000354725 SLIT2O94813 1529 aa13.35□□□□□ -0.27
SND1-201ENST00000354725 BRPF1P55201 1214 aaPredicted RBP13.35□□□□□ -0.27
SND1-201ENST00000354725 RGPD1P0DJD0 1748 aa13.35□□□□□ -0.27
SND1-201ENST00000354725 ZBTB12Q9Y330 459 aaPredicted RBP13.35□□□□□ -0.27
SND1-201ENST00000354725 DDIT3P35638 169 aa13.34□□□□□ -0.27
SND1-201ENST00000354725 CGNQ9P2M7 1197 aaKnown RBP13.34□□□□□ -0.27
SND1-201ENST00000354725 FAM208AQ9UK61 1670 aaKnown RBP13.34□□□□□ -0.27
SND1-201ENST00000354725 NGDNQ8NEJ9 315 aaKnown RBP13.34□□□□□ -0.27
SND1-201ENST00000354725 FYB1O15117 783 aa13.33□□□□□ -0.27
SND1-201ENST00000354725 IRX5P78411 483 aaPredicted RBP13.33□□□□□ -0.27
SND1-201ENST00000354725 TBC1D2Q9BYX2 928 aa13.33□□□□□ -0.28
SND1-201ENST00000354725 TERF2IPQ9NYB0 399 aa13.33□□□□□ -0.28
SND1-201ENST00000354725 RGPD2P0DJD1 1756 aa13.33□□□□□ -0.28
SND1-201ENST00000354725 DYNC1I1O14576 645 aa13.33□□□□□ -0.28
SND1-201ENST00000354725 SMC5Q8IY18 1101 aa13.33□□□□□ -0.28
SND1-201ENST00000354725 RRP7AQ9Y3A4 280 aaKnown RBP13.32□□□□□ -0.28
SND1-201ENST00000354725 TMTC2Q8N394 836 aa13.32□□□□□ -0.28
SND1-201ENST00000354725 RWDD1Q9H446 243 aaPredicted RBP13.32□□□□□ -0.28
SND1-201ENST00000354725 ZRANB1Q9UGI0 708 aa13.32□□□□□ -0.28
SND1-201ENST00000354725 UQCRHLA0A096LP55 91 aa13.32□□□□□ -0.28
SND1-201ENST00000354725 UQCRHP07919 91 aa13.32□□□□□ -0.28
SND1-201ENST00000354725 R3HCC1Q9Y3T6 440 aaKnown RBP13.32□□□□□ -0.28
SND1-201ENST00000354725 CFAP53Q96M91 514 aa13.31□□□□□ -0.28
SND1-201ENST00000354725 BCL9LQ86UU0 1499 aa13.31□□□□□ -0.28
SND1-201ENST00000354725 TUBGCP6Q96RT7 1819 aa13.31□□□□□ -0.28
SND1-201ENST00000354725 BECN1Q14457 450 aa13.31□□□□□ -0.28
SND1-201ENST00000354725 NME9Q86XW9 330 aa13.31□□□□□ -0.28
SND1-201ENST00000354725 ZKSCAN2Q63HK3 967 aa13.3□□□□□ -0.28
SND1-201ENST00000354725 HDGFL2Q7Z4V5 671 aaPredicted RBP13.3□□□□□ -0.28
SND1-201ENST00000354725 TRIM27P14373 513 aa13.3□□□□□ -0.28
SND1-201ENST00000354725 CC2D2BQ6DHV5 1058 aa13.3□□□□□ -0.28
SND1-201ENST00000354725 ARMCX6Q7L4S7 300 aa13.3□□□□□ -0.28
SND1-201ENST00000354725 GRPEL1Q9HAV7 217 aa13.3□□□□□ -0.28
SND1-201ENST00000354725 AATKQ6ZMQ8 1374 aa13.3□□□□□ -0.28
SND1-201ENST00000354725 TMPOP42166 694 aaKnown RBP13.29□□□□□ -0.28
SND1-201ENST00000354725 AXDND1Q5T1B0 1012 aaPredicted RBP13.29□□□□□ -0.28
SND1-201ENST00000354725 DZIP1LQ8IYY4 767 aaKnown RBP13.29□□□□□ -0.28
SND1-201ENST00000354725 ZBTB40Q9NUA8 1239 aa13.29□□□□□ -0.28
SND1-201ENST00000354725 GLI3P10071 1580 aa13.29□□□□□ -0.28
SND1-201ENST00000354725 THSD7AQ9UPZ6 1657 aa13.29□□□□□ -0.28
SND1-201ENST00000354725 SHANK3Q9BYB0 1731 aa13.28□□□□□ -0.28
SND1-201ENST00000354725 PHF14O94880 888 aa13.28□□□□□ -0.28
SND1-201ENST00000354725 NCAPD2Q15021 1401 aa13.28□□□□□ -0.28
SND1-201ENST00000354725 SETQ01105 290 aaPredicted RBP13.28□□□□□ -0.28
SND1-201ENST00000354725 RGS17Q9UGC6 210 aaPredicted RBP13.28□□□□□ -0.28
SND1-201ENST00000354725 SGSM3Q96HU1 749 aa13.27□□□□□ -0.28
SND1-201ENST00000354725 SEMA3FQ13275 785 aa13.27□□□□□ -0.28
SND1-201ENST00000354725 GZF1Q9H116 711 aaPredicted RBP13.27□□□□□ -0.28
SND1-201ENST00000354725 ALDH1L2Q3SY69 923 aa13.26□□□□□ -0.29
SND1-201ENST00000354725 ATF7IPQ6VMQ6 1270 aa13.26□□□□□ -0.29
SND1-201ENST00000354725 ZSCAN30Q86W11 494 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms