RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 MARF1Q9Y4F3 1742 aaKnown RBP11.8□□□□□ -0.52
RPE-201ENST00000354506 XPCQ01831 940 aaPredicted RBP11.8□□□□□ -0.52
RPE-201ENST00000354506 MTHFSDQ2M296 383 aaKnown RBP11.8□□□□□ -0.52
RPE-201ENST00000354506 KIF13AQ9H1H9 1805 aa11.8□□□□□ -0.52
RPE-201ENST00000354506 KIAA1211Q6ZU35 1233 aa11.8□□□□□ -0.52
RPE-201ENST00000354506 ZMYND15Q9H091 742 aa11.8□□□□□ -0.52
RPE-201ENST00000354506 GDPD2Q9HCC8 539 aa11.8□□□□□ -0.52
RPE-201ENST00000354506 CWC22Q9HCG8 908 aaKnown RBP11.8□□□□□ -0.52
RPE-201ENST00000354506 USP54Q70EL1 1684 aa11.8□□□□□ -0.52
RPE-201ENST00000354506 F6X3S4 739 aa11.79□□□□□ -0.52
RPE-201ENST00000354506 G2E3Q7L622 706 aa11.79□□□□□ -0.52
RPE-201ENST00000354506 CEP170BQ9Y4F5 1589 aaPredicted RBP11.79□□□□□ -0.52
RPE-201ENST00000354506 FAM208AQ9UK61 1670 aaKnown RBP11.79□□□□□ -0.52
RPE-201ENST00000354506 LTKP29376 864 aa11.79□□□□□ -0.52
RPE-201ENST00000354506 PPP1R9BQ96SB3 815 aa11.79□□□□□ -0.52
RPE-201ENST00000354506 NSFL1CQ9UNZ2 370 aaKnown RBP11.79□□□□□ -0.52
RPE-201ENST00000354506 ZDHHC9Q9Y397 364 aa11.79□□□□□ -0.52
RPE-201ENST00000354506 NWD1Q149M9 1564 aa11.79□□□□□ -0.52
RPE-201ENST00000354506 PIK3C2AO00443 1686 aa11.79□□□□□ -0.52
RPE-201ENST00000354506 FOXO3O43524 673 aa11.79□□□□□ -0.52
RPE-201ENST00000354506 LMBRD1Q9NUN5 540 aa11.79□□□□□ -0.52
RPE-201ENST00000354506 FAM13BQ9NYF5 915 aa11.79□□□□□ -0.52
RPE-201ENST00000354506 R3HCC1Q9Y3T6 440 aaKnown RBP11.79□□□□□ -0.52
RPE-201ENST00000354506 TTC21AQ8NDW8 1320 aa11.79□□□□□ -0.52
RPE-201ENST00000354506 SBNO1A3KN83 1393 aa11.79□□□□□ -0.52
RPE-201ENST00000354506 CCT4P50991 539 aaKnown RBP11.78□□□□□ -0.52
RPE-201ENST00000354506 ZNF445P59923 1031 aa11.78□□□□□ -0.52
RPE-201ENST00000354506 NUCB2P80303 420 aa11.78□□□□□ -0.52
RPE-201ENST00000354506 JARID2Q92833 1246 aaPredicted RBP11.78□□□□□ -0.52
RPE-201ENST00000354506 IGSF1Q8N6C5 1336 aa11.78□□□□□ -0.52
RPE-201ENST00000354506 PDE1AP54750 535 aa11.78□□□□□ -0.52
RPE-201ENST00000354506 CACNA1FO60840 1977 aa11.77□□□□□ -0.52
RPE-201ENST00000354506 HTATSF1O43719 755 aaKnown RBP11.77□□□□□ -0.52
RPE-201ENST00000354506 RGPD8O14715 1765 aaPredicted RBP11.77□□□□□ -0.52
RPE-201ENST00000354506 FLT4P35916 1363 aa11.77□□□□□ -0.53
RPE-201ENST00000354506 GOLGA6L22H0YM25 854 aa11.77□□□□□ -0.53
RPE-201ENST00000354506 PRIM1P49642 420 aaKnown RBP11.77□□□□□ -0.53
RPE-201ENST00000354506 ERC2O15083 957 aa11.76□□□□□ -0.53
RPE-201ENST00000354506 ANP32BQ92688 251 aaKnown RBP11.76□□□□□ -0.53
RPE-201ENST00000354506 BCL11BQ9C0K0 894 aaPredicted RBP11.76□□□□□ -0.53
RPE-201ENST00000354506 RBSNQ9H1K0 784 aa11.76□□□□□ -0.53
RPE-201ENST00000354506 SYCE3A1L190 88 aa11.76□□□□□ -0.53
RPE-201ENST00000354506 REC8O95072 547 aa11.76□□□□□ -0.53
RPE-201ENST00000354506 EYA1Q99502 592 aa11.76□□□□□ -0.53
RPE-201ENST00000354506 EXOC6BQ9Y2D4 811 aa11.76□□□□□ -0.53
RPE-201ENST00000354506 SLIT1O75093 1534 aa11.76□□□□□ -0.53
RPE-201ENST00000354506 MAP4K4O95819 1239 aaPredicted RBP11.75□□□□□ -0.53
RPE-201ENST00000354506 PLCB2Q00722 1185 aa11.75□□□□□ -0.53
RPE-201ENST00000354506 ARHGAP23Q9P227 1491 aa11.75□□□□□ -0.53
RPE-201ENST00000354506 HMMRO75330 724 aa11.75□□□□□ -0.53
RPE-201ENST00000354506 MSNP26038 577 aaKnown RBP11.75□□□□□ -0.53
RPE-201ENST00000354506 CASC1Q6TDU7 716 aa11.75□□□□□ -0.53
RPE-201ENST00000354506 FAM177BA6PVY3 158 aa11.75□□□□□ -0.53
RPE-201ENST00000354506 PKNOX2Q96KN3 472 aa11.75□□□□□ -0.53
RPE-201ENST00000354506 UPF3BQ9BZI7 483 aaKnown RBP11.75□□□□□ -0.53
RPE-201ENST00000354506 STAP2Q9UGK3 403 aa11.75□□□□□ -0.53
RPE-201ENST00000354506 TSPYL4Q9UJ04 414 aa11.75□□□□□ -0.53
RPE-201ENST00000354506 SOS1Q07889 1333 aaPredicted RBP11.74□□□□□ -0.53
RPE-201ENST00000354506 PXDNLA1KZ92 1463 aa11.74□□□□□ -0.53
RPE-201ENST00000354506 ATP8B2P98198 1209 aa11.74□□□□□ -0.53
RPE-201ENST00000354506 TSC1Q92574 1164 aa11.74□□□□□ -0.53
RPE-201ENST00000354506 DIP2AQ14689 1571 aa11.74□□□□□ -0.53
RPE-201ENST00000354506 ST18O60284 1047 aa11.74□□□□□ -0.53
RPE-201ENST00000354506 GNAI2P04899 355 aa11.74□□□□□ -0.53
RPE-201ENST00000354506 RILPL2Q969X0 211 aa11.74□□□□□ -0.53
RPE-201ENST00000354506 CCDC173Q0VFZ6 552 aa11.73□□□□□ -0.53
RPE-201ENST00000354506 CUL4AQ13619 759 aa11.73□□□□□ -0.53
RPE-201ENST00000354506 ZSCAN23Q3MJ62 389 aa11.73□□□□□ -0.53
RPE-201ENST00000354506 ZNF830Q96NB3 372 aaPredicted RBP11.73□□□□□ -0.53
RPE-201ENST00000354506 BABAM1Q9NWV8 329 aa11.73□□□□□ -0.53
RPE-201ENST00000354506 NEK4P51957 841 aa11.73□□□□□ -0.53
RPE-201ENST00000354506 GPT2Q8TD30 523 aa11.73□□□□□ -0.53
RPE-201ENST00000354506 DDX54Q8TDD1 881 aaKnown RBP11.73□□□□□ -0.53
RPE-201ENST00000354506 PNMA6EA0A0J9YXQ4 647 aa11.73□□□□□ -0.53
RPE-201ENST00000354506 ESYT1Q9BSJ8 1104 aa11.73□□□□□ -0.53
RPE-201ENST00000354506 TRIM6-TRIM34B2RNG4 842 aa11.72□□□□□ -0.53
RPE-201ENST00000354506 FLIIQ13045 1269 aa11.72□□□□□ -0.53
RPE-201ENST00000354506 RTF1Q92541 710 aaKnown RBP11.72□□□□□ -0.53
RPE-201ENST00000354506 C17orf53Q8N3J3 647 aaPredicted RBP11.71□□□□□ -0.53
RPE-201ENST00000354506 TBX22Q9Y458 520 aa11.71□□□□□ -0.53
RPE-201ENST00000354506 EPB41L2O43491 1005 aaKnown RBP11.71□□□□□ -0.53
RPE-201ENST00000354506 CHMLP26374 656 aa11.71□□□□□ -0.53
RPE-201ENST00000354506 ANAPC15P60006 121 aa11.71□□□□□ -0.53
RPE-201ENST00000354506 IL17REQ8NFR9 667 aa11.71□□□□□ -0.53
RPE-201ENST00000354506 LRRCC1Q9C099 1032 aa11.71□□□□□ -0.53
RPE-201ENST00000354506 GLIPR1L2Q4G1C9 344 aa11.71□□□□□ -0.54
RPE-201ENST00000354506 PDLIM2Q96JY6 352 aa11.71□□□□□ -0.54
RPE-201ENST00000354506 ESF1Q9H501 851 aaKnown RBP11.71□□□□□ -0.54
RPE-201ENST00000354506 AMOTL2Q9Y2J4 779 aa11.71□□□□□ -0.54
RPE-201ENST00000354506 AOX1Q06278 1338 aa11.7□□□□□ -0.54
RPE-201ENST00000354506 MED1Q15648 1581 aaPredicted RBP11.7□□□□□ -0.54
RPE-201ENST00000354506 PTMAP06454 111 aaKnown RBP11.7□□□□□ -0.54
RPE-201ENST00000354506 GNAI3P08754 354 aa11.7□□□□□ -0.54
RPE-201ENST00000354506 MCM2P49736 904 aa11.7□□□□□ -0.54
RPE-201ENST00000354506 CCDC30Q5VVM6 783 aa11.7□□□□□ -0.54
RPE-201ENST00000354506 TMX3Q96JJ7 454 aa11.7□□□□□ -0.54
RPE-201ENST00000354506 USP44Q9H0E7 712 aa11.7□□□□□ -0.54
RPE-201ENST00000354506 PRDM10Q9NQV6 1147 aa11.7□□□□□ -0.54
RPE-201ENST00000354506 TMEM63CQ9P1W3 806 aa11.7□□□□□ -0.54
RPE-201ENST00000354506 MX1P20591 662 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms