RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 LGR6Q9HBX8 967 aa25.12■■□□□ 1.61
VPS72-201ENST00000354473 MRC1P22897 1456 aa25.11■■□□□ 1.61
VPS72-201ENST00000354473 MAP3K5Q99683 1374 aa25.11■■□□□ 1.61
VPS72-201ENST00000354473 LOC102724428A0A0B4J2F2 783 aa25.11■■□□□ 1.61
VPS72-201ENST00000354473 SIK1P57059 783 aa25.11■■□□□ 1.61
VPS72-201ENST00000354473 NFATC2IPQ8NCF5 419 aa25.11■■□□□ 1.61
VPS72-201ENST00000354473 TFCP2L1Q9NZI6 479 aa25.1■■□□□ 1.61
VPS72-201ENST00000354473 C4BP0C0L5 1744 aa25.09■■□□□ 1.61
VPS72-201ENST00000354473 SLC52A2Q9HAB3 445 aa25.09■■□□□ 1.61
VPS72-201ENST00000354473 GNAT3A8MTJ3 354 aa25.08■■□□□ 1.6
VPS72-201ENST00000354473 PRKRIP1Q9H875 184 aaPredicted RBP25.08■■□□□ 1.6
VPS72-201ENST00000354473 SPON1Q9HCB6 807 aa25.08■■□□□ 1.6
VPS72-201ENST00000354473 ZBTB7AO95365 584 aa25.07■■□□□ 1.6
VPS72-201ENST00000354473 HMGB2P26583 209 aaKnown RBP25.07■■□□□ 1.6
VPS72-201ENST00000354473 PNPLA7Q6ZV29 1317 aa25.07■■□□□ 1.6
VPS72-201ENST00000354473 ZNF831Q5JPB2 1677 aa25.06■■□□□ 1.6
VPS72-201ENST00000354473 ATP6V1AP38606 617 aa25.06■■□□□ 1.6
VPS72-201ENST00000354473 RBM42Q9BTD8 480 aaKnown RBP25.06■■□□□ 1.6
VPS72-201ENST00000354473 ITPK1Q13572 414 aa25.05■■□□□ 1.6
VPS72-201ENST00000354473 LINC00116Q8NCU8 138 aa25.04■■□□□ 1.6
VPS72-201ENST00000354473 PTCD1O75127 700 aaKnown RBP25.02■■□□□ 1.6
VPS72-201ENST00000354473 AK7Q96M32 723 aa25.02■■□□□ 1.6
VPS72-201ENST00000354473 SLC4A9Q96Q91 983 aa25.02■■□□□ 1.6
VPS72-201ENST00000354473 ATF5Q9Y2D1 282 aaPredicted RBP25.02■■□□□ 1.6
VPS72-201ENST00000354473 IL17REQ8NFR9 667 aa25.01■■□□□ 1.59
VPS72-201ENST00000354473 MTFR1LQ9H019 292 aa25.01■■□□□ 1.59
VPS72-201ENST00000354473 UBR3Q6ZT12 1888 aa25.01■■□□□ 1.59
VPS72-201ENST00000354473 SIPA1L3O60292 1781 aaPredicted RBP25.01■■□□□ 1.59
VPS72-201ENST00000354473 COL5A3P25940 1745 aaPredicted RBP25.01■■□□□ 1.59
VPS72-201ENST00000354473 NEFMP07197 916 aa25■■□□□ 1.59
VPS72-201ENST00000354473 TEFQ10587 303 aa24.99■■□□□ 1.59
VPS72-201ENST00000354473 CEMIPQ8WUJ3 1361 aa24.98■■□□□ 1.59
VPS72-201ENST00000354473 MSH5O43196 834 aa24.98■■□□□ 1.59
VPS72-201ENST00000354473 SLC39A6Q13433 755 aa24.98■■□□□ 1.59
VPS72-201ENST00000354473 PLEKHF1Q96S99 279 aa24.98■■□□□ 1.59
VPS72-201ENST00000354473 TJP1Q07157 1748 aa24.98■■□□□ 1.59
VPS72-201ENST00000354473 DLG5Q8TDM6 1919 aa24.98■■□□□ 1.59
VPS72-201ENST00000354473 CICQ96RK0 1608 aaPredicted RBP24.98■■□□□ 1.59
VPS72-201ENST00000354473 COL23A1Q86Y22 540 aaPredicted RBP24.97■■□□□ 1.59
VPS72-201ENST00000354473 PNNQ9H307 717 aaKnown RBP24.97■■□□□ 1.59
VPS72-201ENST00000354473 PPP1R1BQ9UD71 204 aaPredicted RBP24.97■■□□□ 1.59
VPS72-201ENST00000354473 UBR2Q8IWV8 1755 aa24.97■■□□□ 1.59
VPS72-201ENST00000354473 KCPQ6ZWJ8 1503 aa24.96■■□□□ 1.59
VPS72-201ENST00000354473 PTGER2P43116 358 aa24.96■■□□□ 1.59
VPS72-201ENST00000354473 AMIGO3Q86WK7 504 aa24.96■■□□□ 1.59
VPS72-201ENST00000354473 SLC16A10Q8TF71 515 aa24.96■■□□□ 1.59
VPS72-201ENST00000354473 RTF1Q92541 710 aaKnown RBP24.96■■□□□ 1.59
VPS72-201ENST00000354473 MAPK8IP3Q9UPT6 1336 aa24.95■■□□□ 1.59
VPS72-201ENST00000354473 GNPATO15228 680 aa24.95■■□□□ 1.58
VPS72-201ENST00000354473 PHF14O94880 888 aa24.95■■□□□ 1.58
VPS72-201ENST00000354473 MCM10Q7L590 875 aa24.94■■□□□ 1.58
VPS72-201ENST00000354473 FLAD1Q8NFF5 587 aa24.94■■□□□ 1.58
VPS72-201ENST00000354473 WDR43Q15061 677 aaKnown RBP eCLIP24.93■■□□□ 1.58
VPS72-201ENST00000354473 SMIM5Q71RC9 77 aa24.93■■□□□ 1.58
VPS72-201ENST00000354473 COL24A1Q17RW2 1714 aa24.93■■□□□ 1.58
VPS72-201ENST00000354473 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.92■■□□□ 1.58
VPS72-201ENST00000354473 HTATSF1O43719 755 aaKnown RBP24.92■■□□□ 1.58
VPS72-201ENST00000354473 SSFA2P28290 1259 aa24.92■■□□□ 1.58
VPS72-201ENST00000354473 TTC5Q8N0Z6 440 aa24.92■■□□□ 1.58
VPS72-201ENST00000354473 SGIP1Q9BQI5 828 aa24.92■■□□□ 1.58
VPS72-201ENST00000354473 CNTNAP4Q9C0A0 1308 aa24.92■■□□□ 1.58
VPS72-201ENST00000354473 MYH14Q7Z406 1995 aaKnown RBP24.92■■□□□ 1.58
VPS72-201ENST00000354473 DCTN1Q14203 1278 aa24.91■■□□□ 1.58
VPS72-201ENST00000354473 NFE2L2Q16236 605 aa24.91■■□□□ 1.58
VPS72-201ENST00000354473 RC3H1Q5TC82 1133 aaKnown RBP24.89■■□□□ 1.58
VPS72-201ENST00000354473 ZNF790Q6PG37 636 aa24.89■■□□□ 1.58
VPS72-201ENST00000354473 CRKLP46109 303 aaKnown RBP24.88■■□□□ 1.57
VPS72-201ENST00000354473 MSL1Q68DK7 614 aa24.88■■□□□ 1.57
VPS72-201ENST00000354473 DNAJC10Q8IXB1 793 aa24.88■■□□□ 1.57
VPS72-201ENST00000354473 RTCBQ9Y3I0 505 aaKnown RBP24.88■■□□□ 1.57
VPS72-201ENST00000354473 BTBD11A6QL63 1104 aa24.87■■□□□ 1.57
VPS72-201ENST00000354473 POLD1P28340 1107 aa24.86■■□□□ 1.57
VPS72-201ENST00000354473 CCDC146Q8IYE0 955 aa24.86■■□□□ 1.57
VPS72-201ENST00000354473 ZNF496Q96IT1 587 aaPredicted RBP24.86■■□□□ 1.57
VPS72-201ENST00000354473 ADAMTS8Q9UP79 889 aa24.86■■□□□ 1.57
VPS72-201ENST00000354473 ANP32CO43423 234 aa24.86■■□□□ 1.57
VPS72-201ENST00000354473 VSIG10Q8N0Z9 540 aa24.86■■□□□ 1.57
VPS72-201ENST00000354473 RPS6KA4O75676 772 aa24.85■■□□□ 1.57
VPS72-201ENST00000354473 ARXQ96QS3 562 aa24.85■■□□□ 1.57
VPS72-201ENST00000354473 C4AP0C0L4 1744 aa24.84■■□□□ 1.57
VPS72-201ENST00000354473 KCNQ3O43525 872 aa24.84■■□□□ 1.57
VPS72-201ENST00000354473 HEG1Q9ULI3 1381 aa24.83■■□□□ 1.57
VPS72-201ENST00000354473 CYP19A1P11511 503 aaPredicted RBP24.83■■□□□ 1.56
VPS72-201ENST00000354473 ADRA2BP18089 450 aa24.83■■□□□ 1.56
VPS72-201ENST00000354473 TRAPPC3LQ5T215 181 aa24.83■■□□□ 1.56
VPS72-201ENST00000354473 RUNDC1Q96C34 613 aa24.83■■□□□ 1.56
VPS72-201ENST00000354473 FMNL2Q96PY5 1086 aa24.83■■□□□ 1.56
VPS72-201ENST00000354473 THUMPD2Q9BTF0 503 aaKnown RBP24.83■■□□□ 1.56
VPS72-201ENST00000354473 CCDC87Q9NVE4 849 aa24.83■■□□□ 1.56
VPS72-201ENST00000354473 TMPOP42166 694 aaKnown RBP24.82■■□□□ 1.56
VPS72-201ENST00000354473 RIPK4P57078 832 aa24.82■■□□□ 1.56
VPS72-201ENST00000354473 INTS5Q6P9B9 1019 aaKnown RBP24.82■■□□□ 1.56
VPS72-201ENST00000354473 TAF7Q15545 349 aaPredicted RBP24.81■■□□□ 1.56
VPS72-201ENST00000354473 CCDC184Q52MB2 194 aa24.81■■□□□ 1.56
VPS72-201ENST00000354473 ARHGEF1Q92888 912 aaKnown RBP24.81■■□□□ 1.56
VPS72-201ENST00000354473 FHDC1Q9C0D6 1143 aaPredicted RBP24.81■■□□□ 1.56
VPS72-201ENST00000354473 RRP7AQ9Y3A4 280 aaKnown RBP24.81■■□□□ 1.56
VPS72-201ENST00000354473 KDM3BQ7LBC6 1761 aa24.79■■□□□ 1.56
VPS72-201ENST00000354473 STARD3NLO95772 234 aa24.78■■□□□ 1.56
VPS72-201ENST00000354473 RFC4P35249 363 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms