RNA–Protein interactions for RNA: ENST00000354332.8

S100A4-201, Transcript of S100 calcium binding protein A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene S100A4, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
S100A4-201ENST00000354332 LTBP1Q14766 1721 aa13.33□□□□□ -0.27
S100A4-201ENST00000354332 DDNO94850 711 aaPredicted RBP13.33□□□□□ -0.28
S100A4-201ENST00000354332 C5P01031 1676 aa13.33□□□□□ -0.28
S100A4-201ENST00000354332 ARFGEF1Q9Y6D6 1849 aa13.32□□□□□ -0.28
S100A4-201ENST00000354332 BRCA1P38398 1863 aaKnown RBP13.32□□□□□ -0.28
S100A4-201ENST00000354332 PALLDQ8WX93 1383 aa13.31□□□□□ -0.28
S100A4-201ENST00000354332 LINC00116Q8NCU8 138 aa13.3□□□□□ -0.28
S100A4-201ENST00000354332 C4BP0C0L5 1744 aa13.3□□□□□ -0.28
S100A4-201ENST00000354332 ECE1P42892 770 aa13.29□□□□□ -0.28
S100A4-201ENST00000354332 TMF1P82094 1093 aa13.29□□□□□ -0.28
S100A4-201ENST00000354332 FMR1Q06787 632 aaKnown RBP eCLIP13.29□□□□□ -0.28
S100A4-201ENST00000354332 EAPPQ56P03 285 aaPredicted RBP13.29□□□□□ -0.28
S100A4-201ENST00000354332 ADAMTS7Q9UKP4 1686 aa13.28□□□□□ -0.28
S100A4-201ENST00000354332 DOT1LQ8TEK3 1739 aa13.28□□□□□ -0.28
S100A4-201ENST00000354332 NFKBIEO00221 500 aa13.28□□□□□ -0.28
S100A4-201ENST00000354332 GNPATO15228 680 aa13.28□□□□□ -0.28
S100A4-201ENST00000354332 MAP1SQ66K74 1059 aaPredicted RBP13.28□□□□□ -0.28
S100A4-201ENST00000354332 NLGN1Q8N2Q7 840 aa13.28□□□□□ -0.28
S100A4-201ENST00000354332 TAF1DQ9H5J8 278 aaPredicted RBP13.28□□□□□ -0.28
S100A4-201ENST00000354332 CLEC11AQ9Y240 323 aa13.28□□□□□ -0.28
S100A4-201ENST00000354332 PARP3Q9Y6F1 533 aa13.28□□□□□ -0.28
S100A4-201ENST00000354332 MEGF6O75095 1541 aa13.28□□□□□ -0.28
S100A4-201ENST00000354332 CA12O43570 354 aa13.27□□□□□ -0.29
S100A4-201ENST00000354332 CNTROBQ8N137 903 aa13.27□□□□□ -0.29
S100A4-201ENST00000354332 KCNH5Q8NCM2 988 aa13.27□□□□□ -0.29
S100A4-201ENST00000354332 COLQQ9Y215 455 aaPredicted RBP13.27□□□□□ -0.29
S100A4-201ENST00000354332 NSD3Q9BZ95 1437 aa13.27□□□□□ -0.29
S100A4-201ENST00000354332 THSD7BQ9C0I4 1608 aa13.27□□□□□ -0.29
S100A4-201ENST00000354332 ANKRD24Q8TF21 1146 aa13.26□□□□□ -0.29
S100A4-201ENST00000354332 ADGRB1O14514 1584 aa13.25□□□□□ -0.29
S100A4-201ENST00000354332 MAP2K2P36507 400 aa13.25□□□□□ -0.29
S100A4-201ENST00000354332 APLP2Q06481 763 aa13.25□□□□□ -0.29
S100A4-201ENST00000354332 ERFEQ4G0M1 354 aa13.25□□□□□ -0.29
S100A4-201ENST00000354332 SLC4A1APQ9BWU0 796 aaKnown RBP13.25□□□□□ -0.29
S100A4-201ENST00000354332 UBR3Q6ZT12 1888 aa13.25□□□□□ -0.29
S100A4-201ENST00000354332 SZT2Q5T011 3432 aa13.25□□□□□ -0.29
S100A4-201ENST00000354332 MNX1P50219 401 aaPredicted RBP13.24□□□□□ -0.29
S100A4-201ENST00000354332 NBPF1Q3BBV0 1214 aa13.24□□□□□ -0.29
S100A4-201ENST00000354332 HMGB2P26583 209 aaKnown RBP13.23□□□□□ -0.29
S100A4-201ENST00000354332 MPRIPQ6WCQ1 1025 aa13.23□□□□□ -0.29
S100A4-201ENST00000354332 DDX21Q9NR30 783 aaKnown RBP eCLIP13.23□□□□□ -0.29
S100A4-201ENST00000354332 TAF1LQ8IZX4 1826 aa13.23□□□□□ -0.29
S100A4-201ENST00000354332 TIAM2Q8IVF5 1701 aa13.22□□□□□ -0.29
S100A4-201ENST00000354332 GYS1P13807 737 aa13.22□□□□□ -0.29
S100A4-201ENST00000354332 CIAPIN1Q6FI81 312 aa13.22□□□□□ -0.29
S100A4-201ENST00000354332 ZCRB1Q8TBF4 217 aaKnown RBP13.22□□□□□ -0.29
S100A4-201ENST00000354332 HPS5Q9UPZ3 1129 aa13.22□□□□□ -0.29
S100A4-201ENST00000354332 ITPK1Q13572 414 aa13.21□□□□□ -0.29
S100A4-201ENST00000354332 C4AP0C0L4 1744 aa13.2□□□□□ -0.3
S100A4-201ENST00000354332 IQCA1LA6NCM1 817 aa13.2□□□□□ -0.3
S100A4-201ENST00000354332 TRAPPC3LQ5T215 181 aa13.2□□□□□ -0.3
S100A4-201ENST00000354332 ZIC5Q96T25 663 aa13.2□□□□□ -0.3
S100A4-201ENST00000354332 COL25A1Q9BXS0 654 aaPredicted RBP13.2□□□□□ -0.3
S100A4-201ENST00000354332 CABP1Q9NZU7 370 aa13.2□□□□□ -0.3
S100A4-201ENST00000354332 BRPF1P55201 1214 aaPredicted RBP13.19□□□□□ -0.3
S100A4-201ENST00000354332 DDR1Q08345 913 aa13.19□□□□□ -0.3
S100A4-201ENST00000354332 CST9Q5W186 159 aa13.19□□□□□ -0.3
S100A4-201ENST00000354332 ARHGEF1Q92888 912 aaKnown RBP13.19□□□□□ -0.3
S100A4-201ENST00000354332 NFAT5O94916 1531 aa13.18□□□□□ -0.3
S100A4-201ENST00000354332 CABP2Q9NPB3 220 aa13.18□□□□□ -0.3
S100A4-201ENST00000354332 LOC102724428A0A0B4J2F2 783 aa13.17□□□□□ -0.3
S100A4-201ENST00000354332 SIK1P57059 783 aa13.17□□□□□ -0.3
S100A4-201ENST00000354332 LTV1Q96GA3 475 aaPredicted RBP13.17□□□□□ -0.3
S100A4-201ENST00000354332 TLL2Q9Y6L7 1015 aa13.17□□□□□ -0.3
S100A4-201ENST00000354332 SMARCC1Q92922 1105 aaPredicted RBP13.16□□□□□ -0.3
S100A4-201ENST00000354332 L3MBTL3Q96JM7 780 aaPredicted RBP13.16□□□□□ -0.3
S100A4-201ENST00000354332 TTC21BQ7Z4L5 1316 aa13.15□□□□□ -0.3
S100A4-201ENST00000354332 EPHX2P34913 555 aa13.15□□□□□ -0.3
S100A4-201ENST00000354332 SRPK2P78362 688 aaKnown RBP13.15□□□□□ -0.3
S100A4-201ENST00000354332 TRAF5O00463 557 aa13.14□□□□□ -0.31
S100A4-201ENST00000354332 CTU1Q7Z7A3 348 aaKnown RBP13.14□□□□□ -0.31
S100A4-201ENST00000354332 TTLL6Q8N841 843 aa13.14□□□□□ -0.31
S100A4-201ENST00000354332 RTCBQ9Y3I0 505 aaKnown RBP13.14□□□□□ -0.31
S100A4-201ENST00000354332 PIGBQ92521 554 aa13.13□□□□□ -0.31
S100A4-201ENST00000354332 HACL1Q9UJ83 578 aa13.13□□□□□ -0.31
S100A4-201ENST00000354332 COL6A3P12111 3177 aa13.13□□□□□ -0.31
S100A4-201ENST00000354332 RFC4P35249 363 aa13.12□□□□□ -0.31
S100A4-201ENST00000354332 ATP6V1AP38606 617 aa13.12□□□□□ -0.31
S100A4-201ENST00000354332 FKBP8Q14318 412 aa13.12□□□□□ -0.31
S100A4-201ENST00000354332 SRP68Q9UHB9 627 aaKnown RBP13.11□□□□□ -0.31
S100A4-201ENST00000354332 CCDC88AQ3V6T2 1871 aa13.1□□□□□ -0.31
S100A4-201ENST00000354332 ADAMTSL1Q8N6G6 1762 aa13.1□□□□□ -0.31
S100A4-201ENST00000354332 SAPCD2Q86UD0 394 aa13.1□□□□□ -0.31
S100A4-201ENST00000354332 C21orf2O43822 256 aa13.09□□□□□ -0.31
S100A4-201ENST00000354332 OTUD5Q96G74 571 aa13.09□□□□□ -0.31
S100A4-201ENST00000354332 TRIOBPQ9H2D6 2365 aa13.09□□□□□ -0.31
S100A4-201ENST00000354332 RNF123Q5XPI4 1314 aa13.09□□□□□ -0.31
S100A4-201ENST00000354332 POLRMTO00411 1230 aaKnown RBP13.08□□□□□ -0.32
S100A4-201ENST00000354332 PNMA8AQ86V59 439 aaPredicted RBP13.08□□□□□ -0.32
S100A4-201ENST00000354332 PRDM6Q9NQX0 595 aa13.08□□□□□ -0.32
S100A4-201ENST00000354332 RAPGEFL1Q9UHV5 662 aa13.08□□□□□ -0.32
S100A4-201ENST00000354332 ZNF541Q9H0D2 1346 aa13.08□□□□□ -0.32
S100A4-201ENST00000354332 POTEFA5A3E0 1075 aa13.07□□□□□ -0.32
S100A4-201ENST00000354332 TRPA1O75762 1119 aa13.07□□□□□ -0.32
S100A4-201ENST00000354332 ASAP1Q9ULH1 1129 aa13.07□□□□□ -0.32
S100A4-201ENST00000354332 MKI67P46013 3256 aaKnown RBP13.07□□□□□ -0.32
S100A4-201ENST00000354332 COL9A1P20849 921 aa13.06□□□□□ -0.32
S100A4-201ENST00000354332 C2CD5Q86YS7 1000 aa13.06□□□□□ -0.32
S100A4-201ENST00000354332 KDM2AQ9Y2K7 1162 aa13.06□□□□□ -0.32
S100A4-201ENST00000354332 ADRA2BP18089 450 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms