RNA–Protein interactions for RNA: ENST00000351959.9

TNFRSF25-203, Transcript of TNF receptor superfamily member 25, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF25, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-203ENST00000351959 CHL1O00533 1208 aa26.14■■□□□ 1.78
TNFRSF25-203ENST00000351959 PIGBQ92521 554 aa26.14■■□□□ 1.78
TNFRSF25-203ENST00000351959 LAS1LQ9Y4W2 734 aaKnown RBP26.14■■□□□ 1.78
TNFRSF25-203ENST00000351959 MRC1P22897 1456 aa26.14■■□□□ 1.78
TNFRSF25-203ENST00000351959 BTBD11A6QL63 1104 aa26.14■■□□□ 1.77
TNFRSF25-203ENST00000351959 KCNQ2O43526 872 aa26.14■■□□□ 1.77
TNFRSF25-203ENST00000351959 E9PSI1 815 aa26.13■■□□□ 1.77
TNFRSF25-203ENST00000351959 SLFN5Q08AF3 891 aa26.12■■□□□ 1.77
TNFRSF25-203ENST00000351959 CDCA7LQ96GN5 454 aa26.12■■□□□ 1.77
TNFRSF25-203ENST00000351959 MYH16Q9H6N6 1097 aa26.12■■□□□ 1.77
TNFRSF25-203ENST00000351959 SPINK5Q9NQ38 1064 aaPredicted RBP26.12■■□□□ 1.77
TNFRSF25-203ENST00000351959 MIS18AQ9NYP9 233 aa26.12■■□□□ 1.77
TNFRSF25-203ENST00000351959 BCL11BQ9C0K0 894 aaPredicted RBP26.11■■□□□ 1.77
TNFRSF25-203ENST00000351959 TSPYL4Q9UJ04 414 aa26.11■■□□□ 1.77
TNFRSF25-203ENST00000351959 TOGARAM1Q9Y4F4 1720 aa26.1■■□□□ 1.77
TNFRSF25-203ENST00000351959 MBIPQ9NS73 344 aa26.09■■□□□ 1.77
TNFRSF25-203ENST00000351959 DOT1LQ8TEK3 1739 aa26.08■■□□□ 1.77
TNFRSF25-203ENST00000351959 ZNF790Q6PG37 636 aa26.08■■□□□ 1.77
TNFRSF25-203ENST00000351959 VIRMAQ69YN4 1812 aaKnown RBP26.08■■□□□ 1.77
TNFRSF25-203ENST00000351959 TRIM37O94972 964 aa26.07■■□□□ 1.76
TNFRSF25-203ENST00000351959 TRMT2AQ8IZ69 625 aaKnown RBP26.07■■□□□ 1.76
TNFRSF25-203ENST00000351959 SLC39A6Q13433 755 aa26.06■■□□□ 1.76
TNFRSF25-203ENST00000351959 PTF1AQ7RTS3 328 aa26.06■■□□□ 1.76
TNFRSF25-203ENST00000351959 TTC5Q8N0Z6 440 aa26.06■■□□□ 1.76
TNFRSF25-203ENST00000351959 ATG3Q9NT62 314 aa26.06■■□□□ 1.76
TNFRSF25-203ENST00000351959 KAT6BQ8WYB5 2073 aa26.06■■□□□ 1.76
TNFRSF25-203ENST00000351959 ASAP1Q9ULH1 1129 aa26.05■■□□□ 1.76
TNFRSF25-203ENST00000351959 ITGB4P16144 1822 aa26.05■■□□□ 1.76
TNFRSF25-203ENST00000351959 SMARCC1Q92922 1105 aaPredicted RBP26.05■■□□□ 1.76
TNFRSF25-203ENST00000351959 TSR2Q969E8 191 aaKnown RBP26.05■■□□□ 1.76
TNFRSF25-203ENST00000351959 SIPA1L3O60292 1781 aaPredicted RBP26.04■■□□□ 1.76
TNFRSF25-203ENST00000351959 KCNQ3O43525 872 aa26.04■■□□□ 1.76
TNFRSF25-203ENST00000351959 FANCIQ9NVI1 1328 aa26.04■■□□□ 1.76
TNFRSF25-203ENST00000351959 DUSP27Q5VZP5 1158 aa26.03■■□□□ 1.76
TNFRSF25-203ENST00000351959 NHSQ6T4R5 1651 aa26.02■■□□□ 1.76
TNFRSF25-203ENST00000351959 EIF4A1P60842 406 aaKnown RBP26.02■■□□□ 1.76
TNFRSF25-203ENST00000351959 SBF2Q86WG5 1849 aa26.02■■□□□ 1.76
TNFRSF25-203ENST00000351959 FMNL2Q96PY5 1086 aa26■■□□□ 1.75
TNFRSF25-203ENST00000351959 ZNF496Q96IT1 587 aaPredicted RBP25.99■■□□□ 1.75
TNFRSF25-203ENST00000351959 PTCD1O75127 700 aaKnown RBP25.98■■□□□ 1.75
TNFRSF25-203ENST00000351959 EXOSC9Q06265 439 aaKnown RBP25.97■■□□□ 1.75
TNFRSF25-203ENST00000351959 PALLDQ8WX93 1383 aa25.97■■□□□ 1.75
TNFRSF25-203ENST00000351959 RBM42Q9BTD8 480 aaKnown RBP25.97■■□□□ 1.75
TNFRSF25-203ENST00000351959 APBA3O96018 575 aa25.96■■□□□ 1.75
TNFRSF25-203ENST00000351959 KDM3BQ7LBC6 1761 aa25.95■■□□□ 1.75
TNFRSF25-203ENST00000351959 HEG1Q9ULI3 1381 aa25.95■■□□□ 1.75
TNFRSF25-203ENST00000351959 CCDC125Q86Z20 511 aa25.95■■□□□ 1.74
TNFRSF25-203ENST00000351959 VSIG10Q8N0Z9 540 aa25.95■■□□□ 1.74
TNFRSF25-203ENST00000351959 C8orf58Q8NAV2 365 aa25.95■■□□□ 1.74
TNFRSF25-203ENST00000351959 PLSCR1O15162 318 aa25.94■■□□□ 1.74
TNFRSF25-203ENST00000351959 GIGYF1O75420 1035 aaPredicted RBP25.94■■□□□ 1.74
TNFRSF25-203ENST00000351959 SNRPA1P09661 255 aaKnown RBP25.94■■□□□ 1.74
TNFRSF25-203ENST00000351959 KRT24Q2M2I5 525 aa25.94■■□□□ 1.74
TNFRSF25-203ENST00000351959 PAPPAQ13219 1627 aa25.93■■□□□ 1.74
TNFRSF25-203ENST00000351959 LOC102724428A0A0B4J2F2 783 aa25.93■■□□□ 1.74
TNFRSF25-203ENST00000351959 SIK1P57059 783 aa25.93■■□□□ 1.74
TNFRSF25-203ENST00000351959 SF3B2Q13435 895 aaKnown RBP25.93■■□□□ 1.74
TNFRSF25-203ENST00000351959 BTAF1O14981 1849 aa25.93■■□□□ 1.74
TNFRSF25-203ENST00000351959 SOS1Q07889 1333 aaPredicted RBP25.92■■□□□ 1.74
TNFRSF25-203ENST00000351959 ELL2O00472 640 aaPredicted RBP25.92■■□□□ 1.74
TNFRSF25-203ENST00000351959 KCPQ6ZWJ8 1503 aa25.92■■□□□ 1.74
TNFRSF25-203ENST00000351959 HOXB7P09629 217 aa25.91■■□□□ 1.74
TNFRSF25-203ENST00000351959 TWISTNBQ3B726 338 aaPredicted RBP25.91■■□□□ 1.74
TNFRSF25-203ENST00000351959 TSPYL6Q8N831 410 aa25.91■■□□□ 1.74
TNFRSF25-203ENST00000351959 TEX13AQ9BXU3 409 aaPredicted RBP25.91■■□□□ 1.74
TNFRSF25-203ENST00000351959 CT47B1P0C2W7 299 aaPredicted RBP25.9■■□□□ 1.74
TNFRSF25-203ENST00000351959 SLC4A9Q96Q91 983 aa25.9■■□□□ 1.74
TNFRSF25-203ENST00000351959 VAMP4O75379 141 aa25.89■■□□□ 1.74
TNFRSF25-203ENST00000351959 ATP6V1AP38606 617 aa25.89■■□□□ 1.74
TNFRSF25-203ENST00000351959 ILDR2Q71H61 639 aa25.89■■□□□ 1.74
TNFRSF25-203ENST00000351959 CHMP4AQ9BY43 222 aa25.89■■□□□ 1.74
TNFRSF25-203ENST00000351959 UBR2Q8IWV8 1755 aa25.88■■□□□ 1.73
TNFRSF25-203ENST00000351959 PRAMEF22A3QJZ6 481 aa25.87■■□□□ 1.73
TNFRSF25-203ENST00000351959 SLC27A3Q5K4L6 730 aa25.87■■□□□ 1.73
TNFRSF25-203ENST00000351959 CCNL1Q9UK58 526 aaPredicted RBP25.87■■□□□ 1.73
TNFRSF25-203ENST00000351959 USP16Q9Y5T5 823 aa25.87■■□□□ 1.73
TNFRSF25-203ENST00000351959 BAG6P46379 1132 aa25.86■■□□□ 1.73
TNFRSF25-203ENST00000351959 DNAJC10Q8IXB1 793 aa25.86■■□□□ 1.73
TNFRSF25-203ENST00000351959 ZNF428Q96B54 188 aa25.86■■□□□ 1.73
TNFRSF25-203ENST00000351959 EP400Q96L91 3159 aa25.86■■□□□ 1.73
TNFRSF25-203ENST00000351959 HMGB2P26583 209 aaKnown RBP25.85■■□□□ 1.73
TNFRSF25-203ENST00000351959 TXNRD1Q16881 649 aa25.85■■□□□ 1.73
TNFRSF25-203ENST00000351959 STARD3NLO95772 234 aa25.84■■□□□ 1.73
TNFRSF25-203ENST00000351959 EIF2S2P20042 333 aaKnown RBP25.83■■□□□ 1.73
TNFRSF25-203ENST00000351959 ITPK1Q13572 414 aa25.83■■□□□ 1.73
TNFRSF25-203ENST00000351959 HDGFL1Q5TGJ6 251 aa25.83■■□□□ 1.73
TNFRSF25-203ENST00000351959 PROM2Q8N271 834 aa25.83■■□□□ 1.73
TNFRSF25-203ENST00000351959 UPF1Q92900 1129 aaKnown RBP eCLIP25.83■■□□□ 1.73
TNFRSF25-203ENST00000351959 TNS1Q9HBL0 1735 aaKnown RBP25.82■■□□□ 1.72
TNFRSF25-203ENST00000351959 CAMKK2Q96RR4 588 aa25.82■■□□□ 1.72
TNFRSF25-203ENST00000351959 CYP19A1P11511 503 aaPredicted RBP25.81■■□□□ 1.72
TNFRSF25-203ENST00000351959 KCNQ4P56696 695 aa25.81■■□□□ 1.72
TNFRSF25-203ENST00000351959 EN1Q05925 392 aaPredicted RBP25.81■■□□□ 1.72
TNFRSF25-203ENST00000351959 CCDC30Q5VVM6 783 aa25.81■■□□□ 1.72
TNFRSF25-203ENST00000351959 LRRC4BQ9NT99 713 aa25.8■■□□□ 1.72
TNFRSF25-203ENST00000351959 LY75O60449 1722 aa25.8■■□□□ 1.72
TNFRSF25-203ENST00000351959 ZNF831Q5JPB2 1677 aa25.79■■□□□ 1.72
TNFRSF25-203ENST00000351959 NECTIN2Q92692 538 aa25.79■■□□□ 1.72
TNFRSF25-203ENST00000351959 EZH2Q15910 746 aaKnown RBP25.78■■□□□ 1.72
TNFRSF25-203ENST00000351959 ALDH1L2Q3SY69 923 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms