RNA–Protein interactions for RNA: ENST00000349736.9

CSNK2A1-202, Transcript of casein kinase 2 alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2A1, Length 4,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-202ENST00000349736 MYOM2P54296 1465 aa11.52□□□□□ -0.57
CSNK2A1-202ENST00000349736 DNTTIP2Q5QJE6 756 aaKnown RBP11.52□□□□□ -0.57
CSNK2A1-202ENST00000349736 TET3O43151 1660 aa11.52□□□□□ -0.57
CSNK2A1-202ENST00000349736 PPRC1Q5VV67 1664 aaKnown RBP11.52□□□□□ -0.57
CSNK2A1-202ENST00000349736 ANKRD44Q8N8A2 993 aa11.52□□□□□ -0.57
CSNK2A1-202ENST00000349736 USP19O94966 1318 aa11.52□□□□□ -0.57
CSNK2A1-202ENST00000349736 GPATCH3Q96I76 525 aa11.52□□□□□ -0.57
CSNK2A1-202ENST00000349736 CD2BP2O95400 341 aaKnown RBP11.51□□□□□ -0.57
CSNK2A1-202ENST00000349736 BMP2KLQ5H9B9 411 aa11.51□□□□□ -0.57
CSNK2A1-202ENST00000349736 ZGPATQ8N5A5 531 aaKnown RBP11.51□□□□□ -0.57
CSNK2A1-202ENST00000349736 TNPO1Q92973 898 aaKnown RBP11.51□□□□□ -0.57
CSNK2A1-202ENST00000349736 HECW2Q9P2P5 1572 aa11.51□□□□□ -0.57
CSNK2A1-202ENST00000349736 SPHKAPQ2M3C7 1700 aa11.51□□□□□ -0.57
CSNK2A1-202ENST00000349736 UBE3BQ7Z3V4 1068 aa11.51□□□□□ -0.57
CSNK2A1-202ENST00000349736 PANK2Q9BZ23 570 aa11.51□□□□□ -0.57
CSNK2A1-202ENST00000349736 KIF1BO60333 1816 aa11.51□□□□□ -0.57
CSNK2A1-202ENST00000349736 TTC22Q5TAA0 569 aa11.51□□□□□ -0.57
CSNK2A1-202ENST00000349736 COPS6Q7L5N1 327 aa11.51□□□□□ -0.57
CSNK2A1-202ENST00000349736 EDC4Q6P2E9 1401 aaKnown RBP11.5□□□□□ -0.57
CSNK2A1-202ENST00000349736 GPTP24298 496 aa11.5□□□□□ -0.57
CSNK2A1-202ENST00000349736 PDE1AP54750 535 aa11.5□□□□□ -0.57
CSNK2A1-202ENST00000349736 CEBPZQ03701 1054 aaKnown RBP11.5□□□□□ -0.57
CSNK2A1-202ENST00000349736 L1TD1Q5T7N2 865 aaKnown RBP11.5□□□□□ -0.57
CSNK2A1-202ENST00000349736 FERMT3Q86UX7 667 aa11.5□□□□□ -0.57
CSNK2A1-202ENST00000349736 FLT4P35916 1363 aa11.5□□□□□ -0.57
CSNK2A1-202ENST00000349736 GSPT1P15170 499 aaKnown RBP11.5□□□□□ -0.57
CSNK2A1-202ENST00000349736 KCNH5Q8NCM2 988 aa11.5□□□□□ -0.57
CSNK2A1-202ENST00000349736 PROSER3Q2NL68 480 aa11.49□□□□□ -0.57
CSNK2A1-202ENST00000349736 DCTPP1Q9H773 170 aa11.49□□□□□ -0.57
CSNK2A1-202ENST00000349736 SNRKQ9NRH2 765 aa11.49□□□□□ -0.57
CSNK2A1-202ENST00000349736 KIDINS220Q9ULH0 1771 aa11.49□□□□□ -0.57
CSNK2A1-202ENST00000349736 PLEKHG3A1L390 1219 aa11.49□□□□□ -0.57
CSNK2A1-202ENST00000349736 GTF2E1P29083 439 aaPredicted RBP11.49□□□□□ -0.57
CSNK2A1-202ENST00000349736 XAGE3Q8WTP9 111 aa11.49□□□□□ -0.57
CSNK2A1-202ENST00000349736 FIBPO43427 364 aa11.49□□□□□ -0.57
CSNK2A1-202ENST00000349736 APPP05067 770 aa11.49□□□□□ -0.57
CSNK2A1-202ENST00000349736 TULP4Q9NRJ4 1543 aa11.48□□□□□ -0.57
CSNK2A1-202ENST00000349736 DDX11L8A8MPP1 907 aa11.48□□□□□ -0.57
CSNK2A1-202ENST00000349736 SHROOM2Q13796 1616 aa11.48□□□□□ -0.57
CSNK2A1-202ENST00000349736 FKBP4Q02790 459 aaKnown RBP eCLIP11.48□□□□□ -0.57
CSNK2A1-202ENST00000349736 WASHC4Q2M389 1173 aa11.48□□□□□ -0.57
CSNK2A1-202ENST00000349736 PRPF40BQ6NWY9 871 aaKnown RBP11.48□□□□□ -0.57
CSNK2A1-202ENST00000349736 ARHGAP45Q92619 1136 aa11.48□□□□□ -0.57
CSNK2A1-202ENST00000349736 A2ML1A8K2U0 1454 aa11.48□□□□□ -0.57
CSNK2A1-202ENST00000349736 CNTROBQ8N137 903 aa11.47□□□□□ -0.57
CSNK2A1-202ENST00000349736 EDC3Q96F86 508 aaKnown RBP11.47□□□□□ -0.57
CSNK2A1-202ENST00000349736 PHF23Q9BUL5 403 aaPredicted RBP11.47□□□□□ -0.57
CSNK2A1-202ENST00000349736 A0A087WZG4 1122 aa11.47□□□□□ -0.57
CSNK2A1-202ENST00000349736 RBM27Q9P2N5 1060 aaKnown RBP11.47□□□□□ -0.57
CSNK2A1-202ENST00000349736 ABCA9Q8IUA7 1624 aa11.47□□□□□ -0.57
CSNK2A1-202ENST00000349736 RABEP1Q15276 862 aa11.47□□□□□ -0.57
CSNK2A1-202ENST00000349736 RHPN1Q8TCX5 695 aa11.47□□□□□ -0.57
CSNK2A1-202ENST00000349736 DBF4Q9UBU7 674 aaPredicted RBP11.47□□□□□ -0.57
CSNK2A1-202ENST00000349736 RAB11FIP4Q86YS3 637 aa11.46□□□□□ -0.57
CSNK2A1-202ENST00000349736 JAKMIP1Q96N16 626 aaKnown RBP11.46□□□□□ -0.57
CSNK2A1-202ENST00000349736 AXIN2Q9Y2T1 843 aa11.46□□□□□ -0.57
CSNK2A1-202ENST00000349736 LRRC2Q9BYS8 371 aa11.46□□□□□ -0.57
CSNK2A1-202ENST00000349736 TTC21AQ8NDW8 1320 aa11.46□□□□□ -0.57
CSNK2A1-202ENST00000349736 ZKSCAN1P17029 563 aaPredicted RBP11.46□□□□□ -0.58
CSNK2A1-202ENST00000349736 PKP1Q13835 747 aa11.46□□□□□ -0.58
CSNK2A1-202ENST00000349736 UNC5CLQ8IV45 518 aa11.46□□□□□ -0.58
CSNK2A1-202ENST00000349736 IP6K1Q92551 441 aa11.46□□□□□ -0.58
CSNK2A1-202ENST00000349736 ANO8Q9HCE9 1232 aaPredicted RBP11.46□□□□□ -0.58
CSNK2A1-202ENST00000349736 PTPRCP08575 1304 aa11.46□□□□□ -0.58
CSNK2A1-202ENST00000349736 GLI2P10070 1586 aa11.46□□□□□ -0.58
CSNK2A1-202ENST00000349736 CASTP20810 708 aaKnown RBP11.46□□□□□ -0.58
CSNK2A1-202ENST00000349736 BICDL1Q6ZP65 573 aa11.46□□□□□ -0.58
CSNK2A1-202ENST00000349736 SMC3Q9UQE7 1217 aa11.46□□□□□ -0.58
CSNK2A1-202ENST00000349736 TULP1O00294 542 aaPredicted RBP11.45□□□□□ -0.58
CSNK2A1-202ENST00000349736 HSP90AB3PQ58FF7 597 aa11.45□□□□□ -0.58
CSNK2A1-202ENST00000349736 DDX11Q96FC9 970 aa11.45□□□□□ -0.58
CSNK2A1-202ENST00000349736 CCDC83Q8IWF9 413 aa11.45□□□□□ -0.58
CSNK2A1-202ENST00000349736 USP16Q9Y5T5 823 aa11.45□□□□□ -0.58
CSNK2A1-202ENST00000349736 NECAB1Q8N987 351 aa11.44□□□□□ -0.58
CSNK2A1-202ENST00000349736 USP44Q9H0E7 712 aa11.44□□□□□ -0.58
CSNK2A1-202ENST00000349736 KIF1BPQ96EK5 621 aa11.44□□□□□ -0.58
CSNK2A1-202ENST00000349736 ACSBG1Q96GR2 724 aa11.44□□□□□ -0.58
CSNK2A1-202ENST00000349736 DDX46Q7L014 1031 aaKnown RBP11.43□□□□□ -0.58
CSNK2A1-202ENST00000349736 ADGRB3O60242 1522 aa11.43□□□□□ -0.58
CSNK2A1-202ENST00000349736 ZFYVE9O95405 1425 aa11.43□□□□□ -0.58
CSNK2A1-202ENST00000349736 RNMTO43148 476 aaKnown RBP11.43□□□□□ -0.58
CSNK2A1-202ENST00000349736 A1BGP04217 495 aa11.43□□□□□ -0.58
CSNK2A1-202ENST00000349736 ATP8B2P98198 1209 aa11.43□□□□□ -0.58
CSNK2A1-202ENST00000349736 ZNF496Q96IT1 587 aaPredicted RBP11.43□□□□□ -0.58
CSNK2A1-202ENST00000349736 MTMR7Q9Y216 660 aa11.43□□□□□ -0.58
CSNK2A1-202ENST00000349736 ZNF853P0CG23 659 aa11.43□□□□□ -0.58
CSNK2A1-202ENST00000349736 DRC7Q8IY82 874 aa11.42□□□□□ -0.58
CSNK2A1-202ENST00000349736 RUFY2Q8WXA3 655 aa11.42□□□□□ -0.58
CSNK2A1-202ENST00000349736 INO80Q9ULG1 1556 aaPredicted RBP11.42□□□□□ -0.58
CSNK2A1-202ENST00000349736 ALKQ9UM73 1620 aa11.42□□□□□ -0.58
CSNK2A1-202ENST00000349736 ANKRD13DQ6ZTN6 518 aa11.42□□□□□ -0.58
CSNK2A1-202ENST00000349736 C19orf44Q9H6X5 657 aa11.42□□□□□ -0.58
CSNK2A1-202ENST00000349736 H3BQV1 296 aa11.42□□□□□ -0.58
CSNK2A1-202ENST00000349736 MSNP26038 577 aaKnown RBP11.42□□□□□ -0.58
CSNK2A1-202ENST00000349736 IFFO2Q5TF58 517 aa11.42□□□□□ -0.58
CSNK2A1-202ENST00000349736 PALD1Q9ULE6 856 aa11.42□□□□□ -0.58
CSNK2A1-202ENST00000349736 MAP3K5Q99683 1374 aa11.42□□□□□ -0.58
CSNK2A1-202ENST00000349736 HSP90AB4PQ58FF6 505 aa11.41□□□□□ -0.58
CSNK2A1-202ENST00000349736 CHMP4AQ9BY43 222 aa11.41□□□□□ -0.58
CSNK2A1-202ENST00000349736 BICC1Q9H694 974 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms