RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 C16orf71Q8IYS4 520 aaPredicted RBP22.71■■□□□ 1.23
SCARF1-202ENST00000348987 API5Q9BZZ5 524 aaKnown RBP22.71■■□□□ 1.23
SCARF1-202ENST00000348987 HDGFP51858 240 aaKnown RBP22.71■■□□□ 1.23
SCARF1-202ENST00000348987 CHMP4BQ9H444 224 aaKnown RBP22.7■■□□□ 1.22
SCARF1-202ENST00000348987 ACEP12821 1306 aa22.7■■□□□ 1.22
SCARF1-202ENST00000348987 MIS18AQ9NYP9 233 aa22.69■■□□□ 1.22
SCARF1-202ENST00000348987 TTC21BQ7Z4L5 1316 aa22.69■■□□□ 1.22
SCARF1-202ENST00000348987 ADAMTS13Q76LX8 1427 aa22.69■■□□□ 1.22
SCARF1-202ENST00000348987 TSPY26PQ9H489 355 aa22.69■■□□□ 1.22
SCARF1-202ENST00000348987 TTC22Q5TAA0 569 aa22.68■■□□□ 1.22
SCARF1-202ENST00000348987 MBD3O95983 291 aa22.68■■□□□ 1.22
SCARF1-202ENST00000348987 OTUD7AQ8TE49 926 aaPredicted RBP22.68■■□□□ 1.22
SCARF1-202ENST00000348987 TECPR2O15040 1411 aa22.68■■□□□ 1.22
SCARF1-202ENST00000348987 UBR1Q8IWV7 1749 aa22.67■■□□□ 1.22
SCARF1-202ENST00000348987 PPP4R3BQ5MIZ7 849 aa22.67■■□□□ 1.22
SCARF1-202ENST00000348987 PRIMPOLQ96LW4 560 aa22.67■■□□□ 1.22
SCARF1-202ENST00000348987 MON2Q7Z3U7 1717 aa22.67■■□□□ 1.22
SCARF1-202ENST00000348987 ATP2B3Q16720 1220 aa22.67■■□□□ 1.22
SCARF1-202ENST00000348987 INTS3Q68E01 1043 aaKnown RBP22.67■■□□□ 1.22
SCARF1-202ENST00000348987 C17orf53Q8N3J3 647 aaPredicted RBP22.67■■□□□ 1.22
SCARF1-202ENST00000348987 KNDC1Q76NI1 1749 aa22.66■■□□□ 1.22
SCARF1-202ENST00000348987 C3P01024 1663 aa22.66■■□□□ 1.22
SCARF1-202ENST00000348987 NOLC1Q14978 699 aaKnown RBP eCLIP22.66■■□□□ 1.22
SCARF1-202ENST00000348987 APBB1O00213 710 aa22.66■■□□□ 1.22
SCARF1-202ENST00000348987 CHL1O00533 1208 aa22.66■■□□□ 1.22
SCARF1-202ENST00000348987 FOXO3O43524 673 aa22.66■■□□□ 1.22
SCARF1-202ENST00000348987 PIBF1Q8WXW3 757 aa22.65■■□□□ 1.22
SCARF1-202ENST00000348987 SIRT1Q96EB6 747 aa22.65■■□□□ 1.22
SCARF1-202ENST00000348987 RGS12O14924 1447 aa22.65■■□□□ 1.22
SCARF1-202ENST00000348987 DCTPP1Q9H773 170 aa22.65■■□□□ 1.22
SCARF1-202ENST00000348987 HMGN5P82970 282 aaKnown RBP22.64■■□□□ 1.22
SCARF1-202ENST00000348987 AMOTL2Q9Y2J4 779 aa22.64■■□□□ 1.21
SCARF1-202ENST00000348987 GTF2F1P35269 517 aaKnown RBP eCLIP22.63■■□□□ 1.213e-7■■■■■ 35.7
SCARF1-202ENST00000348987 TTC12Q9H892 705 aaPredicted RBP22.63■■□□□ 1.21
SCARF1-202ENST00000348987 PTPRUQ92729 1446 aa22.63■■□□□ 1.21
SCARF1-202ENST00000348987 TRHP20396 242 aaPredicted RBP22.63■■□□□ 1.21
SCARF1-202ENST00000348987 FGD1P98174 961 aa22.63■■□□□ 1.21
SCARF1-202ENST00000348987 SMARCA5O60264 1052 aaPredicted RBP22.62■■□□□ 1.21
SCARF1-202ENST00000348987 MEIS3Q99687 375 aa22.62■■□□□ 1.21
SCARF1-202ENST00000348987 GTPBP4Q9BZE4 634 aaKnown RBP22.62■■□□□ 1.21
SCARF1-202ENST00000348987 ATP10DQ9P241 1426 aa22.62■■□□□ 1.21
SCARF1-202ENST00000348987 SDSP20132 328 aa22.62■■□□□ 1.21
SCARF1-202ENST00000348987 KIF3AQ9Y496 699 aa22.62■■□□□ 1.21
SCARF1-202ENST00000348987 FOXD4L6Q3SYB3 417 aaPredicted RBP22.61■■□□□ 1.21
SCARF1-202ENST00000348987 FOXD4L3Q6VB84 417 aaPredicted RBP22.61■■□□□ 1.21
SCARF1-202ENST00000348987 RBM33Q96EV2 1170 aaKnown RBP22.61■■□□□ 1.21
SCARF1-202ENST00000348987 MSH6P52701 1360 aa22.61■■□□□ 1.21
SCARF1-202ENST00000348987 SPDYE4A6NLX3 237 aa22.61■■□□□ 1.21
SCARF1-202ENST00000348987 CEP85Q6P2H3 762 aa22.61■■□□□ 1.21
SCARF1-202ENST00000348987 USP25Q9UHP3 1055 aa22.61■■□□□ 1.21
SCARF1-202ENST00000348987 AKAP12Q02952 1782 aa22.6■■□□□ 1.21
SCARF1-202ENST00000348987 OVOS2A0A0J9YW53 1432 aa22.6■■□□□ 1.21
SCARF1-202ENST00000348987 OVOS2Q6IE36 1432 aa22.6■■□□□ 1.21
SCARF1-202ENST00000348987 ANKRD44Q8N8A2 993 aa22.6■■□□□ 1.21
SCARF1-202ENST00000348987 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.6■■□□□ 1.21
SCARF1-202ENST00000348987 SLC4A2P04920 1241 aa22.6■■□□□ 1.21
SCARF1-202ENST00000348987 TMX3Q96JJ7 454 aa22.59■■□□□ 1.21
SCARF1-202ENST00000348987 EID1Q9Y6B2 187 aa22.59■■□□□ 1.21
SCARF1-202ENST00000348987 MAP3K19Q56UN5 1328 aa22.59■■□□□ 1.21
SCARF1-202ENST00000348987 NUTM2GQ5VZR2 741 aa22.59■■□□□ 1.21
SCARF1-202ENST00000348987 CASC1Q6TDU7 716 aa22.59■■□□□ 1.21
SCARF1-202ENST00000348987 G2E3Q7L622 706 aa22.59■■□□□ 1.21
SCARF1-202ENST00000348987 BCL2L12Q9HB09 334 aa22.59■■□□□ 1.21
SCARF1-202ENST00000348987 GDPD2Q9HCC8 539 aa22.59■■□□□ 1.21
SCARF1-202ENST00000348987 KIF20AO95235 890 aa22.58■■□□□ 1.21
SCARF1-202ENST00000348987 BRD1O95696 1058 aa22.58■■□□□ 1.21
SCARF1-202ENST00000348987 ITSN1Q15811 1721 aa22.58■■□□□ 1.2
SCARF1-202ENST00000348987 PLEKHG3A1L390 1219 aa22.58■■□□□ 1.2
SCARF1-202ENST00000348987 F6X3S4 739 aa22.58■■□□□ 1.2
SCARF1-202ENST00000348987 GADD45BO75293 160 aaPredicted RBP22.58■■□□□ 1.2
SCARF1-202ENST00000348987 NEK4P51957 841 aa22.58■■□□□ 1.2
SCARF1-202ENST00000348987 SYAP1Q96A49 352 aaPredicted RBP22.58■■□□□ 1.2
SCARF1-202ENST00000348987 USP6P35125 1406 aa22.57■■□□□ 1.2
SCARF1-202ENST00000348987 RTL1A6NKG5 1358 aa22.57■■□□□ 1.2
SCARF1-202ENST00000348987 PEAK1Q9H792 1746 aa22.57■■□□□ 1.2
SCARF1-202ENST00000348987 MTHFSDQ2M296 383 aaKnown RBP22.57■■□□□ 1.2
SCARF1-202ENST00000348987 NRKQ7Z2Y5 1582 aa22.56■■□□□ 1.2
SCARF1-202ENST00000348987 REC8O95072 547 aa22.56■■□□□ 1.2
SCARF1-202ENST00000348987 ADCY5O95622 1261 aa22.56■■□□□ 1.2
SCARF1-202ENST00000348987 KIF24Q5T7B8 1368 aa22.56■■□□□ 1.2
SCARF1-202ENST00000348987 PLEKHG1Q9ULL1 1385 aa22.56■■□□□ 1.2
SCARF1-202ENST00000348987 LETM1O95202 739 aaPredicted RBP22.55■■□□□ 1.2
SCARF1-202ENST00000348987 FKBP5Q13451 457 aaPredicted RBP22.55■■□□□ 1.2
SCARF1-202ENST00000348987 SLC4A10Q6U841 1118 aa22.55■■□□□ 1.2
SCARF1-202ENST00000348987 CRB1P82279 1406 aa22.55■■□□□ 1.2
SCARF1-202ENST00000348987 IGSF3O75054 1194 aa22.54■■□□□ 1.2
SCARF1-202ENST00000348987 NOL8Q76FK4 1167 aaKnown RBP22.54■■□□□ 1.2
SCARF1-202ENST00000348987 PDCL2Q8N4E4 241 aa22.54■■□□□ 1.2
SCARF1-202ENST00000348987 KIAA0232Q92628 1395 aa22.53■■□□□ 1.2
SCARF1-202ENST00000348987 RPAP2Q8IXW5 612 aaPredicted RBP22.53■■□□□ 1.2
SCARF1-202ENST00000348987 PHF14O94880 888 aa22.53■■□□□ 1.2
SCARF1-202ENST00000348987 TPRNQ4KMQ1 711 aa22.53■■□□□ 1.2
SCARF1-202ENST00000348987 SPTLC3Q9NUV7 552 aa22.53■■□□□ 1.2
SCARF1-202ENST00000348987 NGDNQ8NEJ9 315 aaKnown RBP22.52■■□□□ 1.2
SCARF1-202ENST00000348987 ERC2O15083 957 aa22.52■■□□□ 1.2
SCARF1-202ENST00000348987 FAM184AQ8NB25 1140 aa22.52■■□□□ 1.2
SCARF1-202ENST00000348987 TSPYL4Q9UJ04 414 aa22.52■■□□□ 1.2
SCARF1-202ENST00000348987 U2AF2P26368 475 aaKnown RBP eCLIP22.51■■□□□ 1.19
SCARF1-202ENST00000348987 UVSSAQ2YD98 709 aa22.51■■□□□ 1.19
SCARF1-202ENST00000348987 USP48Q86UV5 1035 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms