RNA–Protein interactions for RNA: ENST00000348286.6

DNMT3B-203, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,048 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-203ENST00000348286 TRPM1Q7Z4N2 1603 aa15.72■□□□□ 0.11
DNMT3B-203ENST00000348286 CABP4P57796 275 aa15.72■□□□□ 0.11
DNMT3B-203ENST00000348286 CCDC83Q8IWF9 413 aa15.72■□□□□ 0.11
DNMT3B-203ENST00000348286 RBM27Q9P2N5 1060 aaKnown RBP15.72■□□□□ 0.11
DNMT3B-203ENST00000348286 LRRC59Q96AG4 307 aaKnown RBP15.72■□□□□ 0.11
DNMT3B-203ENST00000348286 BCL11BQ9C0K0 894 aaPredicted RBP15.72■□□□□ 0.11
DNMT3B-203ENST00000348286 ISY1Q9ULR0 285 aaKnown RBP15.72■□□□□ 0.11
DNMT3B-203ENST00000348286 GLRX3O76003 335 aaKnown RBP15.71■□□□□ 0.11
DNMT3B-203ENST00000348286 PDRG1Q9NUG6 133 aa15.71■□□□□ 0.11
DNMT3B-203ENST00000348286 CHPF2Q9P2E5 772 aa15.71■□□□□ 0.11
DNMT3B-203ENST00000348286 CHD1O14646 1710 aa15.71■□□□□ 0.11
DNMT3B-203ENST00000348286 LARP1BQ659C4 914 aaKnown RBP15.71■□□□□ 0.11
DNMT3B-203ENST00000348286 PTCD1O75127 700 aaKnown RBP15.71■□□□□ 0.1
DNMT3B-203ENST00000348286 ZFYVE9O95405 1425 aa15.7■□□□□ 0.1
DNMT3B-203ENST00000348286 ZGPATQ8N5A5 531 aaKnown RBP15.7■□□□□ 0.1
DNMT3B-203ENST00000348286 SNX21Q969T3 373 aa15.7■□□□□ 0.1
DNMT3B-203ENST00000348286 BLOC1S2Q6QNY1 142 aa15.7■□□□□ 0.1
DNMT3B-203ENST00000348286 PHAXQ9H814 394 aaKnown RBP15.7■□□□□ 0.1
DNMT3B-203ENST00000348286 DBF4Q9UBU7 674 aaPredicted RBP15.7■□□□□ 0.1
DNMT3B-203ENST00000348286 MAP3K2Q9Y2U5 619 aa15.7■□□□□ 0.1
DNMT3B-203ENST00000348286 CHL1O00533 1208 aa15.69■□□□□ 0.1
DNMT3B-203ENST00000348286 KCNA6P17658 529 aa15.69■□□□□ 0.1
DNMT3B-203ENST00000348286 TOM1L2Q6ZVM7 507 aa15.69■□□□□ 0.1
DNMT3B-203ENST00000348286 RHPN1Q8TCX5 695 aa15.69■□□□□ 0.1
DNMT3B-203ENST00000348286 TMX3Q96JJ7 454 aa15.69■□□□□ 0.1
DNMT3B-203ENST00000348286 SYNMO15061 1565 aa15.69■□□□□ 0.1
DNMT3B-203ENST00000348286 RAB11FIP3O75154 756 aa15.69■□□□□ 0.1
DNMT3B-203ENST00000348286 ZCCHC11Q5TAX3 1644 aaKnown RBP15.69■□□□□ 0.1
DNMT3B-203ENST00000348286 CDC42BPBQ9Y5S2 1711 aa15.69■□□□□ 0.1
DNMT3B-203ENST00000348286 MYD88Q99836 296 aa15.69■□□□□ 0.1
DNMT3B-203ENST00000348286 TULP1O00294 542 aaPredicted RBP15.68■□□□□ 0.1
DNMT3B-203ENST00000348286 SASS6Q6UVJ0 657 aa15.68■□□□□ 0.1
DNMT3B-203ENST00000348286 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.68■□□□□ 0.1
DNMT3B-203ENST00000348286 ATP8B2P98198 1209 aa15.67■□□□□ 0.1
DNMT3B-203ENST00000348286 SLC39A6Q13433 755 aa15.67■□□□□ 0.1
DNMT3B-203ENST00000348286 SPC24Q8NBT2 197 aa15.67■□□□□ 0.1
DNMT3B-203ENST00000348286 HIP1O00291 1037 aa15.67■□□□□ 0.1
DNMT3B-203ENST00000348286 ZNF592Q92610 1267 aa15.67■□□□□ 0.1
DNMT3B-203ENST00000348286 PRDM11Q9NQV5 511 aa15.67■□□□□ 0.1
DNMT3B-203ENST00000348286 IQGAP3Q86VI3 1631 aa15.67■□□□□ 0.1
DNMT3B-203ENST00000348286 MSH6P52701 1360 aa15.67■□□□□ 0.1
DNMT3B-203ENST00000348286 TTC21AQ8NDW8 1320 aa15.67■□□□□ 0.1
DNMT3B-203ENST00000348286 PIP4K2AP48426 406 aaPredicted RBP15.67■□□□□ 0.1
DNMT3B-203ENST00000348286 RBM25P49756 843 aaKnown RBP15.67■□□□□ 0.1
DNMT3B-203ENST00000348286 TRDNQ13061 729 aa15.67■□□□□ 0.1
DNMT3B-203ENST00000348286 CREBRFQ8IUR6 639 aa15.67■□□□□ 0.1
DNMT3B-203ENST00000348286 ZFYVE16Q7Z3T8 1539 aa15.67■□□□□ 0.1
DNMT3B-203ENST00000348286 DDX11Q96FC9 970 aa15.66■□□□□ 0.1
DNMT3B-203ENST00000348286 ESYT1Q9BSJ8 1104 aa15.66■□□□□ 0.1
DNMT3B-203ENST00000348286 PDCP20941 246 aa15.66■□□□□ 0.1
DNMT3B-203ENST00000348286 LRRFIP1Q32MZ4 808 aaKnown RBP15.66■□□□□ 0.1
DNMT3B-203ENST00000348286 USP26Q9BXU7 913 aa15.66■□□□□ 0.1
DNMT3B-203ENST00000348286 PA2G4Q9UQ80 394 aaKnown RBP15.66■□□□□ 0.1
DNMT3B-203ENST00000348286 ATP5J2-PTCD1G3V325 749 aa15.66■□□□□ 0.1
DNMT3B-203ENST00000348286 RALYLQ86SE5 291 aaKnown RBP15.66■□□□□ 0.1
DNMT3B-203ENST00000348286 MYOM2P54296 1465 aa15.66■□□□□ 0.1
DNMT3B-203ENST00000348286 EDC4Q6P2E9 1401 aaKnown RBP15.66■□□□□ 0.1
DNMT3B-203ENST00000348286 FLT4P35916 1363 aa15.66■□□□□ 0.1
DNMT3B-203ENST00000348286 DTNBO60941 627 aa15.65■□□□□ 0.1
DNMT3B-203ENST00000348286 FKBP4Q02790 459 aaKnown RBP eCLIP15.65■□□□□ 0.1
DNMT3B-203ENST00000348286 TCEANC2Q96MN5 208 aa15.65■□□□□ 0.1
DNMT3B-203ENST00000348286 CCDC39Q9UFE4 941 aa15.65■□□□□ 0.1
DNMT3B-203ENST00000348286 LTKP29376 864 aa15.65■□□□□ 0.1
DNMT3B-203ENST00000348286 AMOTQ4VCS5 1084 aa15.65■□□□□ 0.1
DNMT3B-203ENST00000348286 VSIG10Q8N0Z9 540 aa15.65■□□□□ 0.1
DNMT3B-203ENST00000348286 CLTCL1P53675 1640 aa15.65■□□□□ 0.1
DNMT3B-203ENST00000348286 CROCC2H7BZ55 1655 aa15.65■□□□□ 0.1
DNMT3B-203ENST00000348286 CHRNA2Q15822 529 aa15.65■□□□□ 0.1
DNMT3B-203ENST00000348286 RBM10P98175 930 aaKnown RBP15.65■□□□□ 0.1
DNMT3B-203ENST00000348286 RAB3GAP1Q15042 981 aa15.65■□□□□ 0.1
DNMT3B-203ENST00000348286 CPLX2Q6PUV4 134 aaKnown RBP15.65■□□□□ 0.1
DNMT3B-203ENST00000348286 CCDC73Q6ZRK6 1079 aa15.65■□□□□ 0.1
DNMT3B-203ENST00000348286 ECHDC1Q9NTX5 307 aa15.65■□□□□ 0.1
DNMT3B-203ENST00000348286 PIK3R4Q99570 1358 aa15.64■□□□□ 0.09
DNMT3B-203ENST00000348286 LARP1Q6PKG0 1096 aaKnown RBP15.64■□□□□ 0.09
DNMT3B-203ENST00000348286 ANKRD24Q8TF21 1146 aa15.64■□□□□ 0.09
DNMT3B-203ENST00000348286 SDF4Q9BRK5 362 aa15.64■□□□□ 0.09
DNMT3B-203ENST00000348286 KLHL40Q2TBA0 621 aa15.64■□□□□ 0.09
DNMT3B-203ENST00000348286 PNMA6EA0A0J9YXQ4 647 aa15.63■□□□□ 0.09
DNMT3B-203ENST00000348286 TPM4P67936 248 aa15.63■□□□□ 0.09
DNMT3B-203ENST00000348286 KRT85P78386 507 aa15.63■□□□□ 0.09
DNMT3B-203ENST00000348286 NFXL1Q6ZNB6 911 aa15.63■□□□□ 0.09
DNMT3B-203ENST00000348286 KRT28Q7Z3Y7 464 aa15.63■□□□□ 0.09
DNMT3B-203ENST00000348286 METP08581 1390 aa15.63■□□□□ 0.09
DNMT3B-203ENST00000348286 PPFIA3O75145 1194 aa15.63■□□□□ 0.09
DNMT3B-203ENST00000348286 HOXC9P31274 260 aa15.63■□□□□ 0.09
DNMT3B-203ENST00000348286 TRIM5Q9C035 493 aa15.63■□□□□ 0.09
DNMT3B-203ENST00000348286 PLXNC1O60486 1568 aa15.63■□□□□ 0.09
DNMT3B-203ENST00000348286 CWF19L2Q2TBE0 894 aaKnown RBP15.63■□□□□ 0.09
DNMT3B-203ENST00000348286 NCBP3Q53F19 620 aaKnown RBP15.63■□□□□ 0.09
DNMT3B-203ENST00000348286 LIMCH1Q9UPQ0 1083 aa15.63■□□□□ 0.09
DNMT3B-203ENST00000348286 GSPT1P15170 499 aaKnown RBP15.62■□□□□ 0.09
DNMT3B-203ENST00000348286 FMNL2Q96PY5 1086 aa15.62■□□□□ 0.09
DNMT3B-203ENST00000348286 A0A087WZG4 1122 aa15.61■□□□□ 0.09
DNMT3B-203ENST00000348286 UBE3BQ7Z3V4 1068 aa15.61■□□□□ 0.09
DNMT3B-203ENST00000348286 LGR6Q9HBX8 967 aa15.61■□□□□ 0.09
DNMT3B-203ENST00000348286 UNC13BO14795 1591 aa15.61■□□□□ 0.09
DNMT3B-203ENST00000348286 CAMK4Q16566 473 aa15.61■□□□□ 0.09
DNMT3B-203ENST00000348286 ZSCAN30Q86W11 494 aa15.61■□□□□ 0.09
DNMT3B-203ENST00000348286 STK11IPQ8N1F8 1099 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms