RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 ADGRB1O14514 1584 aa16.71■□□□□ 0.27
CSNK1G3-201ENST00000345990 CCDC57Q2TAC2 916 aa16.71■□□□□ 0.27
CSNK1G3-201ENST00000345990 MROH2AA6NES4 1674 aa16.71■□□□□ 0.27
CSNK1G3-201ENST00000345990 CDC45O75419 566 aa16.71■□□□□ 0.27
CSNK1G3-201ENST00000345990 CNTROBQ8N137 903 aa16.71■□□□□ 0.26
CSNK1G3-201ENST00000345990 IQGAP1P46940 1657 aa16.71■□□□□ 0.26
CSNK1G3-201ENST00000345990 ARHGAP23Q9P227 1491 aa16.7■□□□□ 0.26
CSNK1G3-201ENST00000345990 TRIM27P14373 513 aa16.7■□□□□ 0.26
CSNK1G3-201ENST00000345990 RNF20Q5VTR2 975 aa16.7■□□□□ 0.26
CSNK1G3-201ENST00000345990 KIF3AQ9Y496 699 aa16.7■□□□□ 0.26
CSNK1G3-201ENST00000345990 ALDH1L1O75891 902 aa16.7■□□□□ 0.26
CSNK1G3-201ENST00000345990 PDZRN3Q9UPQ7 1066 aa16.7■□□□□ 0.26
CSNK1G3-201ENST00000345990 SPATA31A3Q5VYP0 1347 aa16.7■□□□□ 0.26
CSNK1G3-201ENST00000345990 IGSF1Q8N6C5 1336 aa16.7■□□□□ 0.26
CSNK1G3-201ENST00000345990 CHL1O00533 1208 aa16.69■□□□□ 0.26
CSNK1G3-201ENST00000345990 ZKSCAN1P17029 563 aaPredicted RBP16.69■□□□□ 0.26
CSNK1G3-201ENST00000345990 CPSF1Q10570 1443 aaKnown RBP16.69■□□□□ 0.26
CSNK1G3-201ENST00000345990 ZPR1O75312 459 aa16.68■□□□□ 0.26
CSNK1G3-201ENST00000345990 NBPF6Q5VWK0 638 aa16.68■□□□□ 0.26
CSNK1G3-201ENST00000345990 BRINP3Q76B58 766 aa16.68■□□□□ 0.26
CSNK1G3-201ENST00000345990 AMOTL1Q8IY63 956 aa16.68■□□□□ 0.26
CSNK1G3-201ENST00000345990 NBPF4Q96M43 638 aa16.68■□□□□ 0.26
CSNK1G3-201ENST00000345990 NAP1L2Q9ULW6 460 aaPredicted RBP16.68■□□□□ 0.26
CSNK1G3-201ENST00000345990 KIAA0232Q92628 1395 aa16.68■□□□□ 0.26
CSNK1G3-201ENST00000345990 SRGAP3O43295 1099 aa16.68■□□□□ 0.26
CSNK1G3-201ENST00000345990 GNL3LQ9NVN8 582 aaKnown RBP16.68■□□□□ 0.26
CSNK1G3-201ENST00000345990 VAMP4O75379 141 aa16.68■□□□□ 0.26
CSNK1G3-201ENST00000345990 DCCP43146 1447 aa16.67■□□□□ 0.26
CSNK1G3-201ENST00000345990 MRPL50Q8N5N7 158 aaKnown RBP16.67■□□□□ 0.26
CSNK1G3-201ENST00000345990 NEUROD6Q96NK8 337 aa16.67■□□□□ 0.26
CSNK1G3-201ENST00000345990 CARD10Q9BWT7 1032 aa16.67■□□□□ 0.26
CSNK1G3-201ENST00000345990 ERVV-2B6SEH9 535 aa16.67■□□□□ 0.26
CSNK1G3-201ENST00000345990 CNNM1Q9NRU3 951 aa16.67■□□□□ 0.26
CSNK1G3-201ENST00000345990 MYO3AQ8NEV4 1616 aa16.67■□□□□ 0.26
CSNK1G3-201ENST00000345990 CCDC158Q5M9N0 1113 aa16.66■□□□□ 0.26
CSNK1G3-201ENST00000345990 KIF1BPQ96EK5 621 aa16.66■□□□□ 0.26
CSNK1G3-201ENST00000345990 CHD1LQ86WJ1 897 aa16.66■□□□□ 0.26
CSNK1G3-201ENST00000345990 CEP126Q9P2H0 1117 aa16.66■□□□□ 0.26
CSNK1G3-201ENST00000345990 TRIM35Q9UPQ4 493 aa16.66■□□□□ 0.26
CSNK1G3-201ENST00000345990 C1orf167Q5SNV9 1468 aa16.65■□□□□ 0.26
CSNK1G3-201ENST00000345990 MYD88Q99836 296 aa16.65■□□□□ 0.26
CSNK1G3-201ENST00000345990 TBC1D2BQ9UPU7 963 aa16.65■□□□□ 0.26
CSNK1G3-201ENST00000345990 TNS3Q68CZ2 1445 aa16.65■□□□□ 0.26
CSNK1G3-201ENST00000345990 ANKRD13DQ6ZTN6 518 aa16.65■□□□□ 0.26
CSNK1G3-201ENST00000345990 MPHOSPH8Q99549 860 aa16.65■□□□□ 0.26
CSNK1G3-201ENST00000345990 KSR2Q6VAB6 950 aa16.65■□□□□ 0.26
CSNK1G3-201ENST00000345990 C8orf58Q8NAV2 365 aa16.65■□□□□ 0.26
CSNK1G3-201ENST00000345990 NFATC2IPQ8NCF5 419 aa16.64■□□□□ 0.25
CSNK1G3-201ENST00000345990 C1orf115Q9H7X2 142 aa16.64■□□□□ 0.25
CSNK1G3-201ENST00000345990 CWC25Q9NXE8 425 aaPredicted RBP16.64■□□□□ 0.25
CSNK1G3-201ENST00000345990 AKAP2Q9Y2D5 859 aa16.64■□□□□ 0.25
CSNK1G3-201ENST00000345990 SLC52A2Q9HAB3 445 aa16.63■□□□□ 0.25
CSNK1G3-201ENST00000345990 WDR17Q8IZU2 1322 aa16.63■□□□□ 0.25
CSNK1G3-201ENST00000345990 KIF13AQ9H1H9 1805 aa16.63■□□□□ 0.25
CSNK1G3-201ENST00000345990 IGHMBP2P38935 993 aaKnown RBP16.63■□□□□ 0.25
CSNK1G3-201ENST00000345990 DDX17Q92841 729 aaKnown RBP16.63■□□□□ 0.25
CSNK1G3-201ENST00000345990 IPO9Q96P70 1041 aaKnown RBP16.63■□□□□ 0.25
CSNK1G3-201ENST00000345990 MAP3K2Q9Y2U5 619 aa16.63■□□□□ 0.25
CSNK1G3-201ENST00000345990 ZRSR1Q15695 479 aaKnown RBP16.62■□□□□ 0.25
CSNK1G3-201ENST00000345990 DDX21Q9NR30 783 aaKnown RBP eCLIP16.62■□□□□ 0.25
CSNK1G3-201ENST00000345990 PPP1R42Q7Z4L9 355 aa16.62■□□□□ 0.25
CSNK1G3-201ENST00000345990 PI4KAP2A4QPH2 592 aa16.62■□□□□ 0.25
CSNK1G3-201ENST00000345990 ZNF790Q6PG37 636 aa16.62■□□□□ 0.25
CSNK1G3-201ENST00000345990 PI4KAP1Q8N8J0 262 aa16.62■□□□□ 0.25
CSNK1G3-201ENST00000345990 CPS1P31327 1500 aa16.62■□□□□ 0.25
CSNK1G3-201ENST00000345990 PLEKHF1Q96S99 279 aa16.62■□□□□ 0.25
CSNK1G3-201ENST00000345990 ZSCAN25Q6NSZ9 544 aa16.61■□□□□ 0.25
CSNK1G3-201ENST00000345990 AK7Q96M32 723 aa16.61■□□□□ 0.25
CSNK1G3-201ENST00000345990 GBP4Q96PP9 640 aa16.61■□□□□ 0.25
CSNK1G3-201ENST00000345990 LINS1Q8NG48 757 aa16.61■□□□□ 0.25
CSNK1G3-201ENST00000345990 ERBB3P21860 1342 aa16.61■□□□□ 0.25
CSNK1G3-201ENST00000345990 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.61■□□□□ 0.25
CSNK1G3-201ENST00000345990 PTPRUQ92729 1446 aa16.61■□□□□ 0.25
CSNK1G3-201ENST00000345990 TSHZ2Q9NRE2 1034 aa16.6■□□□□ 0.25
CSNK1G3-201ENST00000345990 CHPF2Q9P2E5 772 aa16.6■□□□□ 0.25
CSNK1G3-201ENST00000345990 HDAC1Q13547 482 aaPredicted RBP16.6■□□□□ 0.25
CSNK1G3-201ENST00000345990 ERBB4Q15303 1308 aa16.6■□□□□ 0.25
CSNK1G3-201ENST00000345990 THRAP3Q9Y2W1 955 aaKnown RBP16.6■□□□□ 0.25
CSNK1G3-201ENST00000345990 FSD1Q9BTV5 496 aa16.59■□□□□ 0.25
CSNK1G3-201ENST00000345990 TRDNQ13061 729 aa16.59■□□□□ 0.25
CSNK1G3-201ENST00000345990 ANO2Q9NQ90 1003 aa16.59■□□□□ 0.25
CSNK1G3-201ENST00000345990 USP21Q9UK80 565 aa16.59■□□□□ 0.25
CSNK1G3-201ENST00000345990 PNPLA6Q8IY17 1366 aa16.59■□□□□ 0.25
CSNK1G3-201ENST00000345990 F6X3S4 739 aa16.58■□□□□ 0.25
CSNK1G3-201ENST00000345990 PHKG2P15735 406 aa16.58■□□□□ 0.25
CSNK1G3-201ENST00000345990 CPLX2Q6PUV4 134 aaKnown RBP16.58■□□□□ 0.25
CSNK1G3-201ENST00000345990 TRMT112Q9UI30 125 aaKnown RBP16.58■□□□□ 0.25
CSNK1G3-201ENST00000345990 POLR1AO95602 1720 aaPredicted RBP16.58■□□□□ 0.25
CSNK1G3-201ENST00000345990 GOLGA6L4A6NEF3 574 aa16.58■□□□□ 0.25
CSNK1G3-201ENST00000345990 FAM177BA6PVY3 158 aa16.58■□□□□ 0.25
CSNK1G3-201ENST00000345990 TTC39AQ5SRH9 613 aa16.58■□□□□ 0.25
CSNK1G3-201ENST00000345990 ATP6V1AP38606 617 aa16.58■□□□□ 0.24
CSNK1G3-201ENST00000345990 IFIT5Q13325 482 aaKnown RBP16.58■□□□□ 0.24
CSNK1G3-201ENST00000345990 XAGE3Q8WTP9 111 aa16.58■□□□□ 0.24
CSNK1G3-201ENST00000345990 SLC39A6Q13433 755 aa16.57■□□□□ 0.24
CSNK1G3-201ENST00000345990 NCAPD2Q15021 1401 aa16.57■□□□□ 0.24
CSNK1G3-201ENST00000345990 CSPP1Q1MSJ5 1256 aa16.57■□□□□ 0.24
CSNK1G3-201ENST00000345990 GLRX3O76003 335 aaKnown RBP16.57■□□□□ 0.24
CSNK1G3-201ENST00000345990 COPS6Q7L5N1 327 aa16.57■□□□□ 0.24
CSNK1G3-201ENST00000345990 SYNE3Q6ZMZ3 975 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms