RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 ASAP1Q9ULH1 1129 aa26.63■■□□□ 1.85
CLTA-202ENST00000345519 DDX10Q13206 875 aaKnown RBP26.62■■□□□ 1.85
CLTA-202ENST00000345519 RALBP1Q15311 655 aa26.62■■□□□ 1.85
CLTA-202ENST00000345519 C4AP0C0L4 1744 aa26.62■■□□□ 1.85
CLTA-202ENST00000345519 LOC102724428A0A0B4J2F2 783 aa26.61■■□□□ 1.85
CLTA-202ENST00000345519 U2SURPO15042 1029 aaKnown RBP26.61■■□□□ 1.85
CLTA-202ENST00000345519 SIK1P57059 783 aa26.61■■□□□ 1.85
CLTA-202ENST00000345519 SGIP1Q9BQI5 828 aa26.61■■□□□ 1.85
CLTA-202ENST00000345519 KCPQ6ZWJ8 1503 aa26.6■■□□□ 1.85
CLTA-202ENST00000345519 NUDCQ9Y266 331 aa26.6■■□□□ 1.85
CLTA-202ENST00000345519 MAP3K5Q99683 1374 aa26.59■■□□□ 1.85
CLTA-202ENST00000345519 MTFR1LQ9H019 292 aa26.59■■□□□ 1.85
CLTA-202ENST00000345519 PTGER2P43116 358 aa26.58■■□□□ 1.85
CLTA-202ENST00000345519 SLC16A10Q8TF71 515 aa26.58■■□□□ 1.85
CLTA-202ENST00000345519 CEMIPQ8WUJ3 1361 aa26.58■■□□□ 1.84
CLTA-202ENST00000345519 RNMTO43148 476 aaKnown RBP26.57■■□□□ 1.84
CLTA-202ENST00000345519 FCHSD2O94868 740 aa26.57■■□□□ 1.84
CLTA-202ENST00000345519 CABP4P57796 275 aa26.57■■□□□ 1.84
CLTA-202ENST00000345519 GAS2L2Q8NHY3 880 aa26.57■■□□□ 1.84
CLTA-202ENST00000345519 SLC52A2Q9HAB3 445 aa26.57■■□□□ 1.84
CLTA-202ENST00000345519 SLC4A9Q96Q91 983 aa26.56■■□□□ 1.84
CLTA-202ENST00000345519 PRKAR2BP31323 418 aa26.55■■□□□ 1.84
CLTA-202ENST00000345519 NFATC2IPQ8NCF5 419 aa26.55■■□□□ 1.84
CLTA-202ENST00000345519 LGR6Q9HBX8 967 aa26.55■■□□□ 1.84
CLTA-202ENST00000345519 TFCP2L1Q9NZI6 479 aa26.55■■□□□ 1.84
CLTA-202ENST00000345519 ITPK1Q13572 414 aa26.54■■□□□ 1.84
CLTA-202ENST00000345519 ZBTB7AO95365 584 aa26.53■■□□□ 1.84
CLTA-202ENST00000345519 LINC00116Q8NCU8 138 aa26.53■■□□□ 1.84
CLTA-202ENST00000345519 PHACTR3Q96KR7 559 aa26.53■■□□□ 1.84
CLTA-202ENST00000345519 MYBBP1AQ9BQG0 1328 aaKnown RBP26.53■■□□□ 1.84
CLTA-202ENST00000345519 U2AF1L5P0DN76 240 aaPredicted RBP26.52■■□□□ 1.84
CLTA-202ENST00000345519 U2AF1Q01081 240 aaKnown RBP eCLIP26.52■■□□□ 1.84
CLTA-202ENST00000345519 KDM3BQ7LBC6 1761 aa26.51■■□□□ 1.83
CLTA-202ENST00000345519 GNAT3A8MTJ3 354 aa26.5■■□□□ 1.83
CLTA-202ENST00000345519 ATP6V1AP38606 617 aa26.5■■□□□ 1.83
CLTA-202ENST00000345519 AMIGO3Q86WK7 504 aa26.49■■□□□ 1.83
CLTA-202ENST00000345519 COL23A1Q86Y22 540 aaPredicted RBP26.49■■□□□ 1.83
CLTA-202ENST00000345519 FLAD1Q8NFF5 587 aa26.49■■□□□ 1.83
CLTA-202ENST00000345519 CNTNAP4Q9C0A0 1308 aa26.48■■□□□ 1.83
CLTA-202ENST00000345519 IL17REQ8NFR9 667 aa26.48■■□□□ 1.83
CLTA-202ENST00000345519 UTRNP46939 3433 aa26.48■■□□□ 1.83
CLTA-202ENST00000345519 SSFA2P28290 1259 aa26.47■■□□□ 1.83
CLTA-202ENST00000345519 PLEKHF1Q96S99 279 aa26.47■■□□□ 1.83
CLTA-202ENST00000345519 PRKRIP1Q9H875 184 aaPredicted RBP26.47■■□□□ 1.83
CLTA-202ENST00000345519 GOLGB1Q14789 3259 aaKnown RBP26.47■■□□□ 1.83
CLTA-202ENST00000345519 RC3H1Q5TC82 1133 aaKnown RBP26.46■■□□□ 1.83
CLTA-202ENST00000345519 KIF13BQ9NQT8 1826 aa26.46■■□□□ 1.83
CLTA-202ENST00000345519 AK7Q96M32 723 aa26.45■■□□□ 1.82
CLTA-202ENST00000345519 ATF5Q9Y2D1 282 aaPredicted RBP26.45■■□□□ 1.82
CLTA-202ENST00000345519 LAMB4A4D0S4 1761 aa26.45■■□□□ 1.82
CLTA-202ENST00000345519 HTATSF1O43719 755 aaKnown RBP26.42■■□□□ 1.82
CLTA-202ENST00000345519 RBM42Q9BTD8 480 aaKnown RBP26.42■■□□□ 1.82
CLTA-202ENST00000345519 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.4■■□□□ 1.82
CLTA-202ENST00000345519 VSIG10Q8N0Z9 540 aa26.4■■□□□ 1.82
CLTA-202ENST00000345519 PPP1R1BQ9UD71 204 aaPredicted RBP26.4■■□□□ 1.82
CLTA-202ENST00000345519 PTCD1O75127 700 aaKnown RBP26.39■■□□□ 1.82
CLTA-202ENST00000345519 ZNF316A6NFI3 1004 aaPredicted RBP26.38■■□□□ 1.81
CLTA-202ENST00000345519 GNPATO15228 680 aa26.38■■□□□ 1.81
CLTA-202ENST00000345519 ADRA2BP18089 450 aa26.38■■□□□ 1.81
CLTA-202ENST00000345519 SLC39A6Q13433 755 aa26.38■■□□□ 1.81
CLTA-202ENST00000345519 KIAA1551Q9HCM1 1747 aa26.37■■□□□ 1.81
CLTA-202ENST00000345519 TEFQ10587 303 aa26.37■■□□□ 1.81
CLTA-202ENST00000345519 ARXQ96QS3 562 aa26.37■■□□□ 1.81
CLTA-202ENST00000345519 PNNQ9H307 717 aaKnown RBP26.37■■□□□ 1.81
CLTA-202ENST00000345519 SCN7AQ01118 1682 aa26.37■■□□□ 1.81
CLTA-202ENST00000345519 ZNF790Q6PG37 636 aa26.36■■□□□ 1.81
CLTA-202ENST00000345519 RPS6KA4O75676 772 aa26.35■■□□□ 1.81
CLTA-202ENST00000345519 BCORQ6W2J9 1755 aa26.35■■□□□ 1.81
CLTA-202ENST00000345519 CRKLP46109 303 aaKnown RBP26.34■■□□□ 1.81
CLTA-202ENST00000345519 RTCBQ9Y3I0 505 aaKnown RBP26.34■■□□□ 1.81
CLTA-202ENST00000345519 HEG1Q9ULI3 1381 aa26.33■■□□□ 1.81
CLTA-202ENST00000345519 POLD1P28340 1107 aa26.33■■□□□ 1.81
CLTA-202ENST00000345519 FHDC1Q9C0D6 1143 aaPredicted RBP26.33■■□□□ 1.81
CLTA-202ENST00000345519 PHF14O94880 888 aa26.32■■□□□ 1.8
CLTA-202ENST00000345519 CYP19A1P11511 503 aaPredicted RBP26.32■■□□□ 1.8
CLTA-202ENST00000345519 NFE2L2Q16236 605 aa26.32■■□□□ 1.8
CLTA-202ENST00000345519 INTS5Q6P9B9 1019 aaKnown RBP26.32■■□□□ 1.8
CLTA-202ENST00000345519 SMIM5Q71RC9 77 aa26.32■■□□□ 1.8
CLTA-202ENST00000345519 DNAJC10Q8IXB1 793 aa26.32■■□□□ 1.8
CLTA-202ENST00000345519 SYT17Q9BSW7 474 aa26.32■■□□□ 1.8
CLTA-202ENST00000345519 CHD4Q14839 1912 aa26.31■■□□□ 1.8
CLTA-202ENST00000345519 MCM10Q7L590 875 aa26.31■■□□□ 1.8
CLTA-202ENST00000345519 RTF1Q92541 710 aaKnown RBP26.31■■□□□ 1.8
CLTA-202ENST00000345519 BRCA1P38398 1863 aaKnown RBP26.31■■□□□ 1.8
CLTA-202ENST00000345519 NRXN2Q9P2S2 1712 aa26.31■■□□□ 1.8
CLTA-202ENST00000345519 NEFMP07197 916 aa26.3■■□□□ 1.8
CLTA-202ENST00000345519 TTC5Q8N0Z6 440 aa26.3■■□□□ 1.8
CLTA-202ENST00000345519 ZNF496Q96IT1 587 aaPredicted RBP26.3■■□□□ 1.8
CLTA-202ENST00000345519 MSH5O43196 834 aa26.29■■□□□ 1.8
CLTA-202ENST00000345519 AFDNP55196 1824 aaKnown RBP26.29■■□□□ 1.8
CLTA-202ENST00000345519 SOS1Q07889 1333 aaPredicted RBP26.29■■□□□ 1.8
CLTA-202ENST00000345519 MAPK8IP3Q9UPT6 1336 aa26.29■■□□□ 1.8
CLTA-202ENST00000345519 TRAPPC3LQ5T215 181 aa26.28■■□□□ 1.8
CLTA-202ENST00000345519 CCDC87Q9NVE4 849 aa26.28■■□□□ 1.8
CLTA-202ENST00000345519 BTBD11A6QL63 1104 aa26.27■■□□□ 1.8
CLTA-202ENST00000345519 ARHGEF1Q92888 912 aaKnown RBP26.27■■□□□ 1.8
CLTA-202ENST00000345519 DCTN1Q14203 1278 aa26.26■■□□□ 1.79
CLTA-202ENST00000345519 MSL1Q68DK7 614 aa26.26■■□□□ 1.79
CLTA-202ENST00000345519 USP42Q9H9J4 1324 aaKnown RBP26.25■■□□□ 1.79
CLTA-202ENST00000345519 FMNL2Q96PY5 1086 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms