RNA–Protein interactions for RNA: ENST00000344770.6

PDZK1-201, Transcript of PDZ domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDZK1, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZK1-201ENST00000344770 AFF2P51816 1311 aa12.17□□□□□ -0.46
PDZK1-201ENST00000344770 HIRIP3Q9BW71 556 aaPredicted RBP12.17□□□□□ -0.46
PDZK1-201ENST00000344770 EPB41L2O43491 1005 aaKnown RBP12.16□□□□□ -0.46
PDZK1-201ENST00000344770 C8orf37Q96NL8 207 aa12.16□□□□□ -0.46
PDZK1-201ENST00000344770 PNMA2Q9UL42 364 aa12.16□□□□□ -0.46
PDZK1-201ENST00000344770 SPATA31A3Q5VYP0 1347 aa12.16□□□□□ -0.46
PDZK1-201ENST00000344770 WASLO00401 505 aaPredicted RBP12.15□□□□□ -0.46
PDZK1-201ENST00000344770 SATB1Q01826 763 aa12.15□□□□□ -0.46
PDZK1-201ENST00000344770 MTERF4Q7Z6M4 381 aaKnown RBP12.15□□□□□ -0.46
PDZK1-201ENST00000344770 L3MBTL2Q969R5 705 aa12.15□□□□□ -0.46
PDZK1-201ENST00000344770 ADAMTS2O95450 1211 aa12.15□□□□□ -0.46
PDZK1-201ENST00000344770 ZFYVE27Q5T4F4 411 aa12.15□□□□□ -0.46
PDZK1-201ENST00000344770 KRT28Q7Z3Y7 464 aa12.15□□□□□ -0.46
PDZK1-201ENST00000344770 RETREG2Q8NC44 543 aa12.15□□□□□ -0.46
PDZK1-201ENST00000344770 ATL2Q8NHH9 583 aa12.15□□□□□ -0.46
PDZK1-201ENST00000344770 SIN3AQ96ST3 1273 aa12.15□□□□□ -0.46
PDZK1-201ENST00000344770 RGPD8O14715 1765 aaPredicted RBP12.15□□□□□ -0.46
PDZK1-201ENST00000344770 TNS3Q68CZ2 1445 aa12.14□□□□□ -0.47
PDZK1-201ENST00000344770 PSME1Q06323 249 aa12.14□□□□□ -0.47
PDZK1-201ENST00000344770 BANK1Q8NDB2 785 aa12.14□□□□□ -0.47
PDZK1-201ENST00000344770 ZBTB12Q9Y330 459 aaPredicted RBP12.14□□□□□ -0.47
PDZK1-201ENST00000344770 SBNO1A3KN83 1393 aa12.14□□□□□ -0.47
PDZK1-201ENST00000344770 KIF4AO95239 1232 aa12.14□□□□□ -0.47
PDZK1-201ENST00000344770 WDR78Q5VTH9 848 aa12.14□□□□□ -0.47
PDZK1-201ENST00000344770 NGLY1Q96IV0 654 aa12.14□□□□□ -0.47
PDZK1-201ENST00000344770 ISY1Q9ULR0 285 aaKnown RBP12.14□□□□□ -0.47
PDZK1-201ENST00000344770 PRR36Q9H6K5 1346 aa12.13□□□□□ -0.47
PDZK1-201ENST00000344770 CDK12Q9NYV4 1490 aaPredicted RBP12.13□□□□□ -0.47
PDZK1-201ENST00000344770 MAP4K4O95819 1239 aaPredicted RBP12.13□□□□□ -0.47
PDZK1-201ENST00000344770 BARGINQ6ZT62 677 aa12.13□□□□□ -0.47
PDZK1-201ENST00000344770 CREBRFQ8IUR6 639 aa12.13□□□□□ -0.47
PDZK1-201ENST00000344770 MORC4Q8TE76 937 aa12.13□□□□□ -0.47
PDZK1-201ENST00000344770 ATP7BP35670 1465 aa12.13□□□□□ -0.47
PDZK1-201ENST00000344770 HMGB1P1B2RPK0 211 aaPredicted RBP12.12□□□□□ -0.47
PDZK1-201ENST00000344770 FRAT2O75474 233 aaPredicted RBP12.12□□□□□ -0.47
PDZK1-201ENST00000344770 RXRBP28702 533 aa12.12□□□□□ -0.47
PDZK1-201ENST00000344770 ZKSCAN2Q63HK3 967 aa12.12□□□□□ -0.47
PDZK1-201ENST00000344770 MAMSTRQ6ZN01 415 aa12.12□□□□□ -0.47
PDZK1-201ENST00000344770 CACTIN-AS1Q8N1I8 211 aa12.12□□□□□ -0.47
PDZK1-201ENST00000344770 ZHX1Q9UKY1 873 aaPredicted RBP12.12□□□□□ -0.47
PDZK1-201ENST00000344770 MRVI1Q9Y6F6 885 aa12.12□□□□□ -0.47
PDZK1-201ENST00000344770 ARHGEF10O15013 1369 aa12.12□□□□□ -0.47
PDZK1-201ENST00000344770 EXOC5O00471 708 aa12.12□□□□□ -0.47
PDZK1-201ENST00000344770 KIF20AO95235 890 aa12.12□□□□□ -0.47
PDZK1-201ENST00000344770 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.12□□□□□ -0.47
PDZK1-201ENST00000344770 PMFBP1Q8TBY8 1022 aa12.12□□□□□ -0.47
PDZK1-201ENST00000344770 FRMD4BQ9Y2L6 1034 aa12.12□□□□□ -0.47
PDZK1-201ENST00000344770 RAB11FIP3O75154 756 aa12.11□□□□□ -0.47
PDZK1-201ENST00000344770 LIG1P18858 919 aa12.11□□□□□ -0.47
PDZK1-201ENST00000344770 TNNT2P45379 298 aaPredicted RBP12.11□□□□□ -0.47
PDZK1-201ENST00000344770 TRPM1Q7Z4N2 1603 aa12.11□□□□□ -0.47
PDZK1-201ENST00000344770 ERBB3P21860 1342 aa12.11□□□□□ -0.47
PDZK1-201ENST00000344770 ITSN1Q15811 1721 aa12.11□□□□□ -0.47
PDZK1-201ENST00000344770 GPRASP1Q5JY77 1395 aa12.11□□□□□ -0.47
PDZK1-201ENST00000344770 TONSLQ96HA7 1378 aa12.11□□□□□ -0.47
PDZK1-201ENST00000344770 DMTNQ08495 405 aa12.1□□□□□ -0.47
PDZK1-201ENST00000344770 CLEC4GQ6UXB4 293 aa12.1□□□□□ -0.47
PDZK1-201ENST00000344770 PPP4R3CPQ6ZMV5 832 aa12.1□□□□□ -0.47
PDZK1-201ENST00000344770 FNBP4Q8N3X1 1017 aaPredicted RBP12.1□□□□□ -0.47
PDZK1-201ENST00000344770 RNF217Q8TC41 542 aa12.1□□□□□ -0.47
PDZK1-201ENST00000344770 PRKRIP1Q9H875 184 aaPredicted RBP12.1□□□□□ -0.47
PDZK1-201ENST00000344770 MARF1Q9Y4F3 1742 aaKnown RBP12.1□□□□□ -0.47
PDZK1-201ENST00000344770 FSD2A1L4K1 749 aa12.1□□□□□ -0.47
PDZK1-201ENST00000344770 FOSBP53539 338 aa12.1□□□□□ -0.47
PDZK1-201ENST00000344770 ZNF662Q6ZS27 426 aa12.1□□□□□ -0.47
PDZK1-201ENST00000344770 HELBQ8NG08 1087 aaPredicted RBP12.1□□□□□ -0.47
PDZK1-201ENST00000344770 WDR70Q9NW82 654 aa12.1□□□□□ -0.47
PDZK1-201ENST00000344770 MAGEC2Q9UBF1 373 aaPredicted RBP12.1□□□□□ -0.47
PDZK1-201ENST00000344770 TRPM3Q9HCF6 1732 aaPredicted RBP12.09□□□□□ -0.47
PDZK1-201ENST00000344770 ZRANB2O95218 330 aaKnown RBP eCLIP12.09□□□□□ -0.47
PDZK1-201ENST00000344770 PAX3P23760 479 aa12.09□□□□□ -0.47
PDZK1-201ENST00000344770 RBM6P78332 1123 aaKnown RBP12.09□□□□□ -0.47
PDZK1-201ENST00000344770 QTRT2Q9H974 415 aaKnown RBP12.09□□□□□ -0.47
PDZK1-201ENST00000344770 MRS2Q9HD23 443 aa12.09□□□□□ -0.47
PDZK1-201ENST00000344770 USP21Q9UK80 565 aa12.09□□□□□ -0.47
PDZK1-201ENST00000344770 NUDT16Q96DE0 195 aaKnown RBP12.09□□□□□ -0.47
PDZK1-201ENST00000344770 CDK19Q9BWU1 502 aa12.09□□□□□ -0.47
PDZK1-201ENST00000344770 TOPAZ1Q8N9V7 1692 aa12.09□□□□□ -0.47
PDZK1-201ENST00000344770 GOLGA6L3A6NEY3 463 aa12.08□□□□□ -0.48
PDZK1-201ENST00000344770 PRR29P0C7W0 189 aa12.08□□□□□ -0.48
PDZK1-201ENST00000344770 NGDNQ8NEJ9 315 aaKnown RBP12.08□□□□□ -0.48
PDZK1-201ENST00000344770 ROCK2O75116 1388 aaKnown RBP12.08□□□□□ -0.48
PDZK1-201ENST00000344770 ZRSR2Q15696 482 aaKnown RBP12.07□□□□□ -0.48
PDZK1-201ENST00000344770 TRPC5Q9UL62 973 aaPredicted RBP12.07□□□□□ -0.48
PDZK1-201ENST00000344770 ATRNO75882 1429 aa12.07□□□□□ -0.48
PDZK1-201ENST00000344770 QRICH2Q9H0J4 1663 aa12.07□□□□□ -0.48
PDZK1-201ENST00000344770 ABCA3Q99758 1704 aa12.07□□□□□ -0.48
PDZK1-201ENST00000344770 ESPNB1AK53 854 aa12.07□□□□□ -0.48
PDZK1-201ENST00000344770 SH3BP5O60239 455 aa12.07□□□□□ -0.48
PDZK1-201ENST00000344770 LMOD3Q0VAK6 560 aa12.07□□□□□ -0.48
PDZK1-201ENST00000344770 BORCS6Q96GS4 357 aa12.07□□□□□ -0.48
PDZK1-201ENST00000344770 RBM28Q9NW13 759 aaKnown RBP12.07□□□□□ -0.48
PDZK1-201ENST00000344770 RGS12O14924 1447 aa12.07□□□□□ -0.48
PDZK1-201ENST00000344770 BCL9LQ86UU0 1499 aa12.07□□□□□ -0.48
PDZK1-201ENST00000344770 ALS2Q96Q42 1657 aa12.07□□□□□ -0.48
PDZK1-201ENST00000344770 SLIT2O94813 1529 aa12.06□□□□□ -0.48
PDZK1-201ENST00000344770 POLR3AO14802 1390 aaPredicted RBP12.06□□□□□ -0.48
PDZK1-201ENST00000344770 CREB3O43889 395 aa12.06□□□□□ -0.48
PDZK1-201ENST00000344770 CCDC61Q9Y6R9 512 aa12.06□□□□□ -0.48
PDZK1-201ENST00000344770 CEP126Q9P2H0 1117 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms