RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 BCL11BQ9C0K0 894 aaPredicted RBP10.43□□□□□ -0.74
HMGCR-202ENST00000343975 NWD2Q9ULI1 1742 aa10.43□□□□□ -0.74
HMGCR-202ENST00000343975 SNRPA1P09661 255 aaKnown RBP10.43□□□□□ -0.74
HMGCR-202ENST00000343975 IL17REQ8NFR9 667 aa10.43□□□□□ -0.74
HMGCR-202ENST00000343975 DDX58O95786 925 aaKnown RBP10.43□□□□□ -0.74
HMGCR-202ENST00000343975 TWISTNBQ3B726 338 aaPredicted RBP10.43□□□□□ -0.74
HMGCR-202ENST00000343975 NBPF14Q5TI25 921 aa10.43□□□□□ -0.74
HMGCR-202ENST00000343975 SMC4Q9NTJ3 1288 aa10.43□□□□□ -0.74
HMGCR-202ENST00000343975 MIS18AQ9NYP9 233 aa10.43□□□□□ -0.74
HMGCR-202ENST00000343975 CT47B1P0C2W7 299 aaPredicted RBP10.42□□□□□ -0.74
HMGCR-202ENST00000343975 SLC39A6Q13433 755 aa10.42□□□□□ -0.74
HMGCR-202ENST00000343975 ZNF790Q6PG37 636 aa10.42□□□□□ -0.74
HMGCR-202ENST00000343975 ATP6V1AP38606 617 aa10.42□□□□□ -0.74
HMGCR-202ENST00000343975 NKX1-1Q15270 411 aaPredicted RBP10.42□□□□□ -0.74
HMGCR-202ENST00000343975 TSR2Q969E8 191 aaKnown RBP10.42□□□□□ -0.74
HMGCR-202ENST00000343975 ZNF428Q96B54 188 aa10.42□□□□□ -0.74
HMGCR-202ENST00000343975 AK7Q96M32 723 aa10.42□□□□□ -0.74
HMGCR-202ENST00000343975 CCNL1Q9UK58 526 aaPredicted RBP10.42□□□□□ -0.74
HMGCR-202ENST00000343975 PEAK1Q9H792 1746 aa10.41□□□□□ -0.74
HMGCR-202ENST00000343975 EXOSC9Q06265 439 aaKnown RBP10.41□□□□□ -0.74
HMGCR-202ENST00000343975 FTSJ3Q8IY81 847 aaKnown RBP10.41□□□□□ -0.74
HMGCR-202ENST00000343975 ONECUT3O60422 494 aaPredicted RBP10.41□□□□□ -0.74
HMGCR-202ENST00000343975 TRIM35Q9UPQ4 493 aa10.41□□□□□ -0.74
HMGCR-202ENST00000343975 CCDC125Q86Z20 511 aa10.4□□□□□ -0.74
HMGCR-202ENST00000343975 NECTIN2Q92692 538 aa10.4□□□□□ -0.74
HMGCR-202ENST00000343975 FRAT1Q92837 279 aaPredicted RBP10.4□□□□□ -0.74
HMGCR-202ENST00000343975 SOS1Q07889 1333 aaPredicted RBP10.4□□□□□ -0.74
HMGCR-202ENST00000343975 PLCH1Q4KWH8 1693 aa10.4□□□□□ -0.74
HMGCR-202ENST00000343975 DUSP27Q5VZP5 1158 aa10.4□□□□□ -0.74
HMGCR-202ENST00000343975 ABCA3Q99758 1704 aa10.4□□□□□ -0.74
HMGCR-202ENST00000343975 SLFN5Q08AF3 891 aa10.4□□□□□ -0.74
HMGCR-202ENST00000343975 CHMP4BQ9H444 224 aaKnown RBP10.4□□□□□ -0.74
HMGCR-202ENST00000343975 MBIPQ9NS73 344 aa10.4□□□□□ -0.74
HMGCR-202ENST00000343975 KIF6Q6ZMV9 814 aa10.39□□□□□ -0.75
HMGCR-202ENST00000343975 FANCIQ9NVI1 1328 aa10.39□□□□□ -0.75
HMGCR-202ENST00000343975 PIGBQ92521 554 aa10.39□□□□□ -0.75
HMGCR-202ENST00000343975 RCAN3Q9UKA8 241 aa10.39□□□□□ -0.75
HMGCR-202ENST00000343975 LMO7Q8WWI1 1683 aa10.39□□□□□ -0.75
HMGCR-202ENST00000343975 CHL1O00533 1208 aa10.39□□□□□ -0.75
HMGCR-202ENST00000343975 NEXNQ0ZGT2 675 aa10.39□□□□□ -0.75
HMGCR-202ENST00000343975 CDCA7LQ96GN5 454 aa10.38□□□□□ -0.75
HMGCR-202ENST00000343975 STK32BQ9NY57 414 aa10.38□□□□□ -0.75
HMGCR-202ENST00000343975 HOXB7P09629 217 aa10.38□□□□□ -0.75
HMGCR-202ENST00000343975 A0A087WZG4 1122 aa10.38□□□□□ -0.75
HMGCR-202ENST00000343975 LOC102724428A0A0B4J2F2 783 aa10.38□□□□□ -0.75
HMGCR-202ENST00000343975 SIK1P57059 783 aa10.38□□□□□ -0.75
HMGCR-202ENST00000343975 HDAC5Q9UQL6 1122 aa10.38□□□□□ -0.75
HMGCR-202ENST00000343975 KIF16BQ96L93 1317 aa10.38□□□□□ -0.75
HMGCR-202ENST00000343975 PALLDQ8WX93 1383 aa10.38□□□□□ -0.75
HMGCR-202ENST00000343975 DISP2A7MBM2 1401 aa10.37□□□□□ -0.75
HMGCR-202ENST00000343975 DBF4Q9UBU7 674 aaPredicted RBP10.37□□□□□ -0.75
HMGCR-202ENST00000343975 ASAP1Q9ULH1 1129 aa10.37□□□□□ -0.75
HMGCR-202ENST00000343975 MARF1Q9Y4F3 1742 aaKnown RBP10.37□□□□□ -0.75
HMGCR-202ENST00000343975 GTF2E1P29083 439 aaPredicted RBP10.37□□□□□ -0.75
HMGCR-202ENST00000343975 ZNF496Q96IT1 587 aaPredicted RBP10.37□□□□□ -0.75
HMGCR-202ENST00000343975 FKBP5Q13451 457 aaPredicted RBP10.37□□□□□ -0.75
HMGCR-202ENST00000343975 API5Q9BZZ5 524 aaKnown RBP10.37□□□□□ -0.75
HMGCR-202ENST00000343975 PARP4Q9UKK3 1724 aaKnown RBP10.37□□□□□ -0.75
HMGCR-202ENST00000343975 KCNQ2O43526 872 aa10.36□□□□□ -0.75
HMGCR-202ENST00000343975 ZNF652Q9Y2D9 606 aa10.36□□□□□ -0.75
HMGCR-202ENST00000343975 RTCBQ9Y3I0 505 aaKnown RBP10.36□□□□□ -0.75
HMGCR-202ENST00000343975 COL18A1P39060 1754 aa10.36□□□□□ -0.75
HMGCR-202ENST00000343975 AIMP1Q12904 312 aaKnown RBP10.36□□□□□ -0.75
HMGCR-202ENST00000343975 SLC27A3Q5K4L6 730 aa10.36□□□□□ -0.75
HMGCR-202ENST00000343975 RIC3Q7Z5B4 369 aa10.36□□□□□ -0.75
HMGCR-202ENST00000343975 RGPD5Q99666 1765 aa10.36□□□□□ -0.75
HMGCR-202ENST00000343975 ZPR1O75312 459 aa10.36□□□□□ -0.75
HMGCR-202ENST00000343975 MYL6BP14649 208 aa10.36□□□□□ -0.75
HMGCR-202ENST00000343975 VSIG10Q8N0Z9 540 aa10.36□□□□□ -0.75
HMGCR-202ENST00000343975 HYPKQ9NX55 129 aa10.36□□□□□ -0.75
HMGCR-202ENST00000343975 TFCP2L1Q9NZI6 479 aa10.36□□□□□ -0.75
HMGCR-202ENST00000343975 TCERG1O14776 1098 aaKnown RBP10.35□□□□□ -0.75
HMGCR-202ENST00000343975 ZBTB47Q9UFB7 747 aaPredicted RBP10.35□□□□□ -0.75
HMGCR-202ENST00000343975 SLC4A2P04920 1241 aa10.35□□□□□ -0.75
HMGCR-202ENST00000343975 EIF4A1P60842 406 aaKnown RBP10.35□□□□□ -0.75
HMGCR-202ENST00000343975 DNAJC10Q8IXB1 793 aa10.35□□□□□ -0.75
HMGCR-202ENST00000343975 FLAD1Q8NFF5 587 aa10.35□□□□□ -0.75
HMGCR-202ENST00000343975 RGS17Q9UGC6 210 aaPredicted RBP10.35□□□□□ -0.75
HMGCR-202ENST00000343975 CRYBG1Q9Y4K1 1723 aa10.35□□□□□ -0.75
HMGCR-202ENST00000343975 BCL2L13Q9BXK5 485 aa10.35□□□□□ -0.75
HMGCR-202ENST00000343975 ATG3Q9NT62 314 aa10.35□□□□□ -0.75
HMGCR-202ENST00000343975 RFC4P35249 363 aa10.34□□□□□ -0.75
HMGCR-202ENST00000343975 SLC4A10Q6U841 1118 aa10.34□□□□□ -0.75
HMGCR-202ENST00000343975 CEMIPQ8WUJ3 1361 aa10.34□□□□□ -0.75
HMGCR-202ENST00000343975 ZKSCAN2Q63HK3 967 aa10.34□□□□□ -0.75
HMGCR-202ENST00000343975 CCDC87Q9NVE4 849 aa10.34□□□□□ -0.75
HMGCR-202ENST00000343975 ERBB4Q15303 1308 aa10.34□□□□□ -0.75
HMGCR-202ENST00000343975 GNPATO15228 680 aa10.34□□□□□ -0.75
HMGCR-202ENST00000343975 HSP90B1P14625 803 aaKnown RBP10.33□□□□□ -0.76
HMGCR-202ENST00000343975 TXNRD1Q16881 649 aa10.33□□□□□ -0.76
HMGCR-202ENST00000343975 ALDH1L2Q3SY69 923 aa10.33□□□□□ -0.76
HMGCR-202ENST00000343975 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.33□□□□□ -0.76
HMGCR-202ENST00000343975 RGS12O14924 1447 aa10.33□□□□□ -0.76
HMGCR-202ENST00000343975 HEG1Q9ULI3 1381 aa10.33□□□□□ -0.76
HMGCR-202ENST00000343975 HSP90AB3PQ58FF7 597 aa10.33□□□□□ -0.76
HMGCR-202ENST00000343975 GIGYF1O75420 1035 aaPredicted RBP10.32□□□□□ -0.76
HMGCR-202ENST00000343975 KDM6AO15550 1401 aaPredicted RBP10.32□□□□□ -0.76
HMGCR-202ENST00000343975 C8orf58Q8NAV2 365 aa10.32□□□□□ -0.76
HMGCR-202ENST00000343975 PHF14O94880 888 aa10.32□□□□□ -0.76
HMGCR-202ENST00000343975 EN1Q05925 392 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms