RNA–Protein interactions for RNA: ENST00000343876.6

CCDC141-201, Transcript of coiled-coil domain containing 141, humanhuman

TSL 1 (best)

Gene CCDC141, Length 3,795 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141-201ENST00000343876 USP31Q70CQ4 1352 aa6.17□□□□□ -1.42
CCDC141-201ENST00000343876 FAM196AQ6ZSG2 479 aa6.16□□□□□ -1.42
CCDC141-201ENST00000343876 TICAM2Q86XR7 235 aa6.16□□□□□ -1.42
CCDC141-201ENST00000343876 CERS3Q8IU89 383 aa6.16□□□□□ -1.42
CCDC141-201ENST00000343876 HDAC5Q9UQL6 1122 aa6.16□□□□□ -1.42
CCDC141-201ENST00000343876 MAP3K19Q56UN5 1328 aa6.16□□□□□ -1.42
CCDC141-201ENST00000343876 HMGB1P09429 215 aaKnown RBP6.16□□□□□ -1.42
CCDC141-201ENST00000343876 CDCA8Q53HL2 280 aa6.16□□□□□ -1.42
CCDC141-201ENST00000343876 FAM182BQ5T319 152 aa6.16□□□□□ -1.42
CCDC141-201ENST00000343876 ZNF830Q96NB3 372 aaPredicted RBP6.16□□□□□ -1.42
CCDC141-201ENST00000343876 PUS7Q96PZ0 661 aaKnown RBP6.16□□□□□ -1.42
CCDC141-201ENST00000343876 TTC21AQ8NDW8 1320 aa6.16□□□□□ -1.42
CCDC141-201ENST00000343876 LTN1O94822 1766 aa6.16□□□□□ -1.42
CCDC141-201ENST00000343876 FAM98CQ17RN3 349 aaKnown RBP6.16□□□□□ -1.42
CCDC141-201ENST00000343876 NLRP13Q86W25 1043 aa6.15□□□□□ -1.42
CCDC141-201ENST00000343876 CAMKK2Q96RR4 588 aa6.15□□□□□ -1.42
CCDC141-201ENST00000343876 CWC22Q9HCG8 908 aaKnown RBP6.15□□□□□ -1.42
CCDC141-201ENST00000343876 STRN4Q9NRL3 753 aa6.15□□□□□ -1.42
CCDC141-201ENST00000343876 RRP7AQ9Y3A4 280 aaKnown RBP6.15□□□□□ -1.42
CCDC141-201ENST00000343876 PAPPAQ13219 1627 aa6.15□□□□□ -1.42
CCDC141-201ENST00000343876 MAP2P11137 1827 aaKnown RBP6.15□□□□□ -1.42
CCDC141-201ENST00000343876 COG3Q96JB2 828 aa6.15□□□□□ -1.42
CCDC141-201ENST00000343876 OVOS2A0A0G2JMS6 1433 aa6.15□□□□□ -1.42
CCDC141-201ENST00000343876 OVOS2A0A0J9YW53 1432 aa6.15□□□□□ -1.42
CCDC141-201ENST00000343876 OVOS2Q6IE36 1432 aa6.15□□□□□ -1.42
CCDC141-201ENST00000343876 CGNL1Q0VF96 1302 aa6.15□□□□□ -1.43
CCDC141-201ENST00000343876 NEUROD2Q15784 382 aa6.15□□□□□ -1.43
CCDC141-201ENST00000343876 CDCA7Q9BWT1 371 aaPredicted RBP6.15□□□□□ -1.43
CCDC141-201ENST00000343876 ADAMTS8Q9UP79 889 aa6.15□□□□□ -1.43
CCDC141-201ENST00000343876 DEFB132Q7Z7B7 95 aa6.14□□□□□ -1.43
CCDC141-201ENST00000343876 TCP11L2Q8N4U5 519 aa6.14□□□□□ -1.43
CCDC141-201ENST00000343876 ZNF692Q9BU19 519 aaPredicted RBP6.14□□□□□ -1.43
CCDC141-201ENST00000343876 KAT6BQ8WYB5 2073 aa6.14□□□□□ -1.43
CCDC141-201ENST00000343876 U2SURPO15042 1029 aaKnown RBP6.14□□□□□ -1.43
CCDC141-201ENST00000343876 MYCNP04198 464 aaPredicted RBP6.14□□□□□ -1.43
CCDC141-201ENST00000343876 CLSTN1O94985 981 aa6.14□□□□□ -1.43
CCDC141-201ENST00000343876 DDX60Q8IY21 1712 aaKnown RBP6.14□□□□□ -1.43
CCDC141-201ENST00000343876 NINLQ9Y2I6 1382 aa6.14□□□□□ -1.43
CCDC141-201ENST00000343876 FAM43AQ8N2R8 423 aa6.13□□□□□ -1.43
CCDC141-201ENST00000343876 NBPF6Q5VWK0 638 aa6.13□□□□□ -1.43
CCDC141-201ENST00000343876 PHACTR3Q96KR7 559 aa6.13□□□□□ -1.43
CCDC141-201ENST00000343876 NBPF4Q96M43 638 aa6.13□□□□□ -1.43
CCDC141-201ENST00000343876 TNS2Q63HR2 1409 aa6.13□□□□□ -1.43
CCDC141-201ENST00000343876 CALD1Q05682 793 aaKnown RBP6.13□□□□□ -1.43
CCDC141-201ENST00000343876 LARP1Q6PKG0 1096 aaKnown RBP6.13□□□□□ -1.43
CCDC141-201ENST00000343876 EDC4Q6P2E9 1401 aaKnown RBP6.13□□□□□ -1.43
CCDC141-201ENST00000343876 CICQ96RK0 1608 aaPredicted RBP6.12□□□□□ -1.43
CCDC141-201ENST00000343876 AMPHP49418 695 aa6.12□□□□□ -1.43
CCDC141-201ENST00000343876 EIF4A2Q14240 407 aaKnown RBP6.12□□□□□ -1.43
CCDC141-201ENST00000343876 KCNH5Q8NCM2 988 aa6.12□□□□□ -1.43
CCDC141-201ENST00000343876 WDR17Q8IZU2 1322 aa6.12□□□□□ -1.43
CCDC141-201ENST00000343876 SHANK3Q9BYB0 1731 aa6.12□□□□□ -1.43
CCDC141-201ENST00000343876 THUMPD2Q9BTF0 503 aaKnown RBP6.12□□□□□ -1.43
CCDC141-201ENST00000343876 RGPD2P0DJD1 1756 aa6.12□□□□□ -1.43
CCDC141-201ENST00000343876 CLGNO14967 610 aa6.12□□□□□ -1.43
CCDC141-201ENST00000343876 HOXC9P31274 260 aa6.12□□□□□ -1.43
CCDC141-201ENST00000343876 DCTN1Q14203 1278 aa6.12□□□□□ -1.43
CCDC141-201ENST00000343876 ARHGEF25Q86VW2 580 aa6.12□□□□□ -1.43
CCDC141-201ENST00000343876 PLSCR1O15162 318 aa6.11□□□□□ -1.43
CCDC141-201ENST00000343876 PNISRQ8TF01 805 aaKnown RBP6.11□□□□□ -1.43
CCDC141-201ENST00000343876 EYA1Q99502 592 aa6.11□□□□□ -1.43
CCDC141-201ENST00000343876 NUDCQ9Y266 331 aa6.11□□□□□ -1.43
CCDC141-201ENST00000343876 IPO9Q96P70 1041 aaKnown RBP6.11□□□□□ -1.43
CCDC141-201ENST00000343876 KDM3BQ7LBC6 1761 aa6.11□□□□□ -1.43
CCDC141-201ENST00000343876 U2AF1L5P0DN76 240 aaPredicted RBP6.11□□□□□ -1.43
CCDC141-201ENST00000343876 U2AF1Q01081 240 aaKnown RBP eCLIP6.11□□□□□ -1.43
CCDC141-201ENST00000343876 EN1Q05925 392 aaPredicted RBP6.11□□□□□ -1.43
CCDC141-201ENST00000343876 PTF1AQ7RTS3 328 aa6.11□□□□□ -1.43
CCDC141-201ENST00000343876 CARD10Q9BWT7 1032 aa6.11□□□□□ -1.43
CCDC141-201ENST00000343876 LY75O60449 1722 aa6.11□□□□□ -1.43
CCDC141-201ENST00000343876 BTAF1O14981 1849 aa6.1□□□□□ -1.43
CCDC141-201ENST00000343876 SULT6B1Q6IMI4 303 aa6.1□□□□□ -1.43
CCDC141-201ENST00000343876 SKAP1Q86WV1 359 aa6.1□□□□□ -1.43
CCDC141-201ENST00000343876 MYBBP1AQ9BQG0 1328 aaKnown RBP6.1□□□□□ -1.43
CCDC141-201ENST00000343876 IL13P35225 146 aa6.1□□□□□ -1.43
CCDC141-201ENST00000343876 EVA1CP58658 441 aa6.1□□□□□ -1.43
CCDC141-201ENST00000343876 GSE1Q14687 1217 aa6.1□□□□□ -1.43
CCDC141-201ENST00000343876 MPNDQ8N594 471 aa6.1□□□□□ -1.43
CCDC141-201ENST00000343876 PDE3BQ13370 1112 aa6.1□□□□□ -1.43
CCDC141-201ENST00000343876 EZH2Q15910 746 aaKnown RBP6.1□□□□□ -1.43
CCDC141-201ENST00000343876 NLRP2Q9NX02 1062 aa6.1□□□□□ -1.43
CCDC141-201ENST00000343876 ANKRD24Q8TF21 1146 aa6.09□□□□□ -1.43
CCDC141-201ENST00000343876 SPINK5Q9NQ38 1064 aaPredicted RBP6.09□□□□□ -1.43
CCDC141-201ENST00000343876 APAF1O14727 1248 aa6.09□□□□□ -1.43
CCDC141-201ENST00000343876 CDCA7LQ96GN5 454 aa6.09□□□□□ -1.43
CCDC141-201ENST00000343876 MIS18AQ9NYP9 233 aa6.09□□□□□ -1.43
CCDC141-201ENST00000343876 CSB-PGBD3P0DP91 1061 aa6.09□□□□□ -1.44
CCDC141-201ENST00000343876 RNF216Q9NWF9 866 aaPredicted RBP6.09□□□□□ -1.44
CCDC141-201ENST00000343876 ZNF521Q96K83 1311 aa6.08□□□□□ -1.44
CCDC141-201ENST00000343876 TRIM37O94972 964 aa6.08□□□□□ -1.44
CCDC141-201ENST00000343876 NBPF14Q5TI25 921 aa6.08□□□□□ -1.44
CCDC141-201ENST00000343876 RTL1A6NKG5 1358 aa6.08□□□□□ -1.44
CCDC141-201ENST00000343876 MAP3K5Q99683 1374 aa6.08□□□□□ -1.44
CCDC141-201ENST00000343876 A0A0G2JS52 829 aa6.08□□□□□ -1.44
CCDC141-201ENST00000343876 APBA3O96018 575 aa6.08□□□□□ -1.44
CCDC141-201ENST00000343876 RALBP1Q15311 655 aa6.08□□□□□ -1.44
CCDC141-201ENST00000343876 PRKAR2BP31323 418 aa6.08□□□□□ -1.44
CCDC141-201ENST00000343876 PKD1L3Q7Z443 1732 aa6.07□□□□□ -1.44
CCDC141-201ENST00000343876 DIAPH1O60610 1272 aaKnown RBP6.07□□□□□ -1.44
CCDC141-201ENST00000343876 TOM1L2Q6ZVM7 507 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms