RNA–Protein interactions for RNA: ENST00000343258.8

VAV3-201, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene VAV3, Length 2,552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-201ENST00000343258 BCL9O00512 1426 aa6.12□□□□□ -1.43
VAV3-201ENST00000343258 LRRC4BQ9NT99 713 aa6.12□□□□□ -1.43
VAV3-201ENST00000343258 SBF2Q86WG5 1849 aa6.12□□□□□ -1.43
VAV3-201ENST00000343258 RGPD1P0DJD0 1748 aa6.12□□□□□ -1.43
VAV3-201ENST00000343258 NPC1L1Q9UHC9 1359 aa6.12□□□□□ -1.43
VAV3-201ENST00000343258 TXNRD1Q16881 649 aa6.12□□□□□ -1.43
VAV3-201ENST00000343258 PLSCR1O15162 318 aa6.11□□□□□ -1.43
VAV3-201ENST00000343258 PPP2R1AP30153 589 aa6.11□□□□□ -1.43
VAV3-201ENST00000343258 MPRIPQ6WCQ1 1025 aa6.11□□□□□ -1.43
VAV3-201ENST00000343258 PCDH11XQ9BZA7 1347 aa6.1□□□□□ -1.43
VAV3-201ENST00000343258 PCDH11YQ9BZA8 1340 aa6.1□□□□□ -1.43
VAV3-201ENST00000343258 COL3A1P02461 1466 aaPredicted RBP6.1□□□□□ -1.43
VAV3-201ENST00000343258 U2SURPO15042 1029 aaKnown RBP6.1□□□□□ -1.43
VAV3-201ENST00000343258 DIAPH1O60610 1272 aaKnown RBP6.1□□□□□ -1.43
VAV3-201ENST00000343258 PHKG2P15735 406 aa6.1□□□□□ -1.43
VAV3-201ENST00000343258 SMIM5Q71RC9 77 aa6.1□□□□□ -1.43
VAV3-201ENST00000343258 PIGBQ92521 554 aa6.1□□□□□ -1.43
VAV3-201ENST00000343258 RBM42Q9BTD8 480 aaKnown RBP6.1□□□□□ -1.43
VAV3-201ENST00000343258 KDRP35968 1356 aa6.09□□□□□ -1.43
VAV3-201ENST00000343258 ZNF827Q17R98 1081 aa6.09□□□□□ -1.43
VAV3-201ENST00000343258 ZNF530Q6P9A1 599 aaPredicted RBP6.09□□□□□ -1.43
VAV3-201ENST00000343258 BRPF3Q9ULD4 1205 aa6.09□□□□□ -1.43
VAV3-201ENST00000343258 SPG7Q9UQ90 795 aa6.09□□□□□ -1.43
VAV3-201ENST00000343258 NHSQ6T4R5 1651 aa6.09□□□□□ -1.44
VAV3-201ENST00000343258 DOT1LQ8TEK3 1739 aa6.09□□□□□ -1.44
VAV3-201ENST00000343258 TOGARAM1Q9Y4F4 1720 aa6.09□□□□□ -1.44
VAV3-201ENST00000343258 NKX1-1Q15270 411 aaPredicted RBP6.09□□□□□ -1.44
VAV3-201ENST00000343258 PHACTR3Q96KR7 559 aa6.09□□□□□ -1.44
VAV3-201ENST00000343258 ASAP1Q9ULH1 1129 aa6.09□□□□□ -1.44
VAV3-201ENST00000343258 BTAF1O14981 1849 aa6.08□□□□□ -1.44
VAV3-201ENST00000343258 PARD3Q8TEW0 1356 aa6.08□□□□□ -1.44
VAV3-201ENST00000343258 KDM6AO15550 1401 aaPredicted RBP6.08□□□□□ -1.44
VAV3-201ENST00000343258 NUP188Q5SRE5 1749 aa6.08□□□□□ -1.44
VAV3-201ENST00000343258 MTHFSDQ2M296 383 aaKnown RBP6.08□□□□□ -1.44
VAV3-201ENST00000343258 AMIGO3Q86WK7 504 aa6.08□□□□□ -1.44
VAV3-201ENST00000343258 IFNL2Q8IZJ0 200 aa6.08□□□□□ -1.44
VAV3-201ENST00000343258 LGR6Q9HBX8 967 aa6.08□□□□□ -1.44
VAV3-201ENST00000343258 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.08□□□□□ -1.44
VAV3-201ENST00000343258 RREB1Q92766 1687 aa6.08□□□□□ -1.44
VAV3-201ENST00000343258 PKD1L3Q7Z443 1732 aa6.08□□□□□ -1.44
VAV3-201ENST00000343258 PLEKHO1Q53GL0 409 aaPredicted RBP6.07□□□□□ -1.44
VAV3-201ENST00000343258 ZBTB7AO95365 584 aa6.07□□□□□ -1.44
VAV3-201ENST00000343258 U2AF1L5P0DN76 240 aaPredicted RBP6.07□□□□□ -1.44
VAV3-201ENST00000343258 U2AF1Q01081 240 aaKnown RBP eCLIP6.07□□□□□ -1.44
VAV3-201ENST00000343258 SLC15A2Q16348 729 aa6.07□□□□□ -1.44
VAV3-201ENST00000343258 SLC4A9Q96Q91 983 aa6.07□□□□□ -1.44
VAV3-201ENST00000343258 CCNL1Q9UK58 526 aaPredicted RBP6.07□□□□□ -1.44
VAV3-201ENST00000343258 PALLDQ8WX93 1383 aa6.07□□□□□ -1.44
VAV3-201ENST00000343258 PRKAR2BP31323 418 aa6.06□□□□□ -1.44
VAV3-201ENST00000343258 NBPF14Q5TI25 921 aa6.06□□□□□ -1.44
VAV3-201ENST00000343258 NFATC2IPQ8NCF5 419 aa6.06□□□□□ -1.44
VAV3-201ENST00000343258 ATG3Q9NT62 314 aa6.06□□□□□ -1.44
VAV3-201ENST00000343258 TMOD3Q9NYL9 352 aa6.06□□□□□ -1.44
VAV3-201ENST00000343258 SSUH2Q9Y2M2 353 aa6.06□□□□□ -1.44
VAV3-201ENST00000343258 ITPK1Q13572 414 aa6.06□□□□□ -1.44
VAV3-201ENST00000343258 AMOTQ4VCS5 1084 aa6.06□□□□□ -1.44
VAV3-201ENST00000343258 AKT1S1Q96B36 256 aa6.06□□□□□ -1.44
VAV3-201ENST00000343258 DCAF5Q96JK2 942 aa6.06□□□□□ -1.44
VAV3-201ENST00000343258 SLC39A6Q13433 755 aa6.05□□□□□ -1.44
VAV3-201ENST00000343258 TAF7LQ5H9L4 462 aa6.05□□□□□ -1.44
VAV3-201ENST00000343258 C1orf141Q5JVX7 400 aa6.05□□□□□ -1.44
VAV3-201ENST00000343258 STK32BQ9NY57 414 aa6.05□□□□□ -1.44
VAV3-201ENST00000343258 SPDYE2BA6NHP3 402 aa6.05□□□□□ -1.44
VAV3-201ENST00000343258 PTCD1O75127 700 aaKnown RBP6.05□□□□□ -1.44
VAV3-201ENST00000343258 SPDYE6P0CI01 402 aa6.05□□□□□ -1.44
VAV3-201ENST00000343258 SPDYE2Q495Y8 402 aa6.05□□□□□ -1.44
VAV3-201ENST00000343258 CCDC184Q52MB2 194 aa6.05□□□□□ -1.44
VAV3-201ENST00000343258 LINC00116Q8NCU8 138 aa6.05□□□□□ -1.44
VAV3-201ENST00000343258 IL17REQ8NFR9 667 aa6.05□□□□□ -1.44
VAV3-201ENST00000343258 CFAP53Q96M91 514 aa6.05□□□□□ -1.44
VAV3-201ENST00000343258 PNPLA7Q6ZV29 1317 aa6.04□□□□□ -1.44
VAV3-201ENST00000343258 PAPPAQ13219 1627 aa6.04□□□□□ -1.44
VAV3-201ENST00000343258 SENP3-EIF4A1A0A087X0R7 540 aa6.04□□□□□ -1.44
VAV3-201ENST00000343258 LOC102724428A0A0B4J2F2 783 aa6.04□□□□□ -1.44
VAV3-201ENST00000343258 SIK1P57059 783 aa6.04□□□□□ -1.44
VAV3-201ENST00000343258 CABP4P57796 275 aa6.04□□□□□ -1.44
VAV3-201ENST00000343258 DCTN1Q14203 1278 aa6.04□□□□□ -1.44
VAV3-201ENST00000343258 AKAP4Q5JQC9 854 aa6.04□□□□□ -1.44
VAV3-201ENST00000343258 PRKRIP1Q9H875 184 aaPredicted RBP6.04□□□□□ -1.44
VAV3-201ENST00000343258 ITGB4P16144 1822 aa6.04□□□□□ -1.44
VAV3-201ENST00000343258 ERVV-2B6SEH9 535 aa6.04□□□□□ -1.44
VAV3-201ENST00000343258 RNMTO43148 476 aaKnown RBP6.04□□□□□ -1.44
VAV3-201ENST00000343258 HSP90AA2PQ14568 343 aaPredicted RBP6.04□□□□□ -1.44
VAV3-201ENST00000343258 SLC27A3Q5K4L6 730 aa6.04□□□□□ -1.44
VAV3-201ENST00000343258 TFCP2L1Q9NZI6 479 aa6.04□□□□□ -1.44
VAV3-201ENST00000343258 RGPD3A6NKT7 1758 aaPredicted RBP6.04□□□□□ -1.44
VAV3-201ENST00000343258 RGPD4Q7Z3J3 1758 aa6.04□□□□□ -1.44
VAV3-201ENST00000343258 NEFMP07197 916 aa6.03□□□□□ -1.44
VAV3-201ENST00000343258 PTGER2P43116 358 aa6.03□□□□□ -1.44
VAV3-201ENST00000343258 RALBP1Q15311 655 aa6.03□□□□□ -1.44
VAV3-201ENST00000343258 MCM10Q7L590 875 aa6.03□□□□□ -1.44
VAV3-201ENST00000343258 SLC52A2Q9HAB3 445 aa6.03□□□□□ -1.44
VAV3-201ENST00000343258 KCNQ3O43525 872 aa6.03□□□□□ -1.44
VAV3-201ENST00000343258 PHF14O94880 888 aa6.03□□□□□ -1.44
VAV3-201ENST00000343258 HSP90AB1P08238 724 aaKnown RBP6.03□□□□□ -1.44
VAV3-201ENST00000343258 ATP6V1AP38606 617 aa6.03□□□□□ -1.44
VAV3-201ENST00000343258 MSL1Q68DK7 614 aa6.03□□□□□ -1.44
VAV3-201ENST00000343258 COL23A1Q86Y22 540 aaPredicted RBP6.03□□□□□ -1.44
VAV3-201ENST00000343258 PLEKHF1Q96S99 279 aa6.03□□□□□ -1.44
VAV3-201ENST00000343258 THUMPD2Q9BTF0 503 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms