RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 ANKRD7Q92527 254 aa11.69□□□□□ -0.54
HOXA1-201ENST00000343060 JARID2Q92833 1246 aaPredicted RBP11.69□□□□□ -0.54
HOXA1-201ENST00000343060 FUCA2Q9BTY2 467 aa11.69□□□□□ -0.54
HOXA1-201ENST00000343060 BCL2L12Q9HB09 334 aa11.69□□□□□ -0.54
HOXA1-201ENST00000343060 ZHX1Q9UKY1 873 aaPredicted RBP11.69□□□□□ -0.54
HOXA1-201ENST00000343060 PREX1Q8TCU6 1659 aa11.69□□□□□ -0.54
HOXA1-201ENST00000343060 MON2Q7Z3U7 1717 aa11.69□□□□□ -0.54
HOXA1-201ENST00000343060 MX1P20591 662 aa11.68□□□□□ -0.54
HOXA1-201ENST00000343060 SLC52A1Q9NWF4 448 aa11.68□□□□□ -0.54
HOXA1-201ENST00000343060 EMILIN1Q9Y6C2 1016 aa11.68□□□□□ -0.54
HOXA1-201ENST00000343060 N4BP2Q86UW6 1770 aaPredicted RBP11.68□□□□□ -0.54
HOXA1-201ENST00000343060 CHL1O00533 1208 aa11.68□□□□□ -0.54
HOXA1-201ENST00000343060 TSC1Q92574 1164 aa11.68□□□□□ -0.54
HOXA1-201ENST00000343060 TTC12Q9H892 705 aaPredicted RBP11.68□□□□□ -0.54
HOXA1-201ENST00000343060 CTIFO43310 598 aaKnown RBP11.67□□□□□ -0.54
HOXA1-201ENST00000343060 KDM4AO75164 1064 aa11.67□□□□□ -0.54
HOXA1-201ENST00000343060 TPM3P06753 285 aa11.67□□□□□ -0.54
HOXA1-201ENST00000343060 IDI1Q13907 227 aa11.67□□□□□ -0.54
HOXA1-201ENST00000343060 ATP2B3Q16720 1220 aa11.67□□□□□ -0.54
HOXA1-201ENST00000343060 KRT24Q2M2I5 525 aa11.67□□□□□ -0.54
HOXA1-201ENST00000343060 KIAA1524Q8TCG1 905 aa11.67□□□□□ -0.54
HOXA1-201ENST00000343060 ZNF830Q96NB3 372 aaPredicted RBP11.67□□□□□ -0.54
HOXA1-201ENST00000343060 DIP2CQ9Y2E4 1556 aa11.67□□□□□ -0.54
HOXA1-201ENST00000343060 RIMBP3CA6NJZ7 1639 aa11.67□□□□□ -0.54
HOXA1-201ENST00000343060 RIMBP3BA6NNM3 1639 aa11.67□□□□□ -0.54
HOXA1-201ENST00000343060 RIMBP3Q9UFD9 1639 aa11.67□□□□□ -0.54
HOXA1-201ENST00000343060 FAM83GA6ND36 823 aa11.67□□□□□ -0.54
HOXA1-201ENST00000343060 FBLN1P23142 703 aa11.67□□□□□ -0.54
HOXA1-201ENST00000343060 CHMLP26374 656 aa11.67□□□□□ -0.54
HOXA1-201ENST00000343060 SETD1AO15047 1707 aaKnown RBP11.67□□□□□ -0.54
HOXA1-201ENST00000343060 UBE2HP62256 183 aa11.66□□□□□ -0.54
HOXA1-201ENST00000343060 PPP4R3BQ5MIZ7 849 aa11.66□□□□□ -0.54
HOXA1-201ENST00000343060 SRCIN1Q9C0H9 1055 aa11.66□□□□□ -0.54
HOXA1-201ENST00000343060 DIAPH3Q9NSV4 1193 aa11.66□□□□□ -0.54
HOXA1-201ENST00000343060 STAP2Q9UGK3 403 aa11.66□□□□□ -0.54
HOXA1-201ENST00000343060 ARHGEF10O15013 1369 aa11.66□□□□□ -0.54
HOXA1-201ENST00000343060 AOX1Q06278 1338 aa11.66□□□□□ -0.54
HOXA1-201ENST00000343060 HCLS1P14317 486 aaPredicted RBP11.66□□□□□ -0.54
HOXA1-201ENST00000343060 GDPD2Q9HCC8 539 aa11.66□□□□□ -0.54
HOXA1-201ENST00000343060 C3P01024 1663 aa11.66□□□□□ -0.54
HOXA1-201ENST00000343060 C17orf53Q8N3J3 647 aaPredicted RBP11.65□□□□□ -0.54
HOXA1-201ENST00000343060 KCNF1Q9H3M0 494 aa11.65□□□□□ -0.54
HOXA1-201ENST00000343060 APBB1O00213 710 aa11.65□□□□□ -0.54
HOXA1-201ENST00000343060 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.65□□□□□ -0.54
HOXA1-201ENST00000343060 RGPD1P0DJD0 1748 aa11.65□□□□□ -0.54
HOXA1-201ENST00000343060 CBX1P83916 185 aa11.64□□□□□ -0.55
HOXA1-201ENST00000343060 PDCL2Q8N4E4 241 aa11.64□□□□□ -0.55
HOXA1-201ENST00000343060 AKAP12Q02952 1782 aa11.64□□□□□ -0.55
HOXA1-201ENST00000343060 CRB1P82279 1406 aa11.64□□□□□ -0.55
HOXA1-201ENST00000343060 ITSN1Q15811 1721 aa11.64□□□□□ -0.55
HOXA1-201ENST00000343060 ZSCAN22P10073 491 aaPredicted RBP11.64□□□□□ -0.55
HOXA1-201ENST00000343060 HSPA4P34932 840 aa11.64□□□□□ -0.55
HOXA1-201ENST00000343060 CCT4P50991 539 aaKnown RBP11.64□□□□□ -0.55
HOXA1-201ENST00000343060 DCTN1Q14203 1278 aa11.64□□□□□ -0.55
HOXA1-201ENST00000343060 SYCP1Q15431 976 aa11.64□□□□□ -0.55
HOXA1-201ENST00000343060 XRN1Q8IZH2 1706 aaKnown RBP11.64□□□□□ -0.55
HOXA1-201ENST00000343060 CRYBG1Q9Y4K1 1723 aa11.64□□□□□ -0.55
HOXA1-201ENST00000343060 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.63□□□□□ -0.55
HOXA1-201ENST00000343060 ANO2Q9NQ90 1003 aa11.63□□□□□ -0.55
HOXA1-201ENST00000343060 CPS1P31327 1500 aa11.63□□□□□ -0.55
HOXA1-201ENST00000343060 RIOK3O14730 519 aaKnown RBP11.63□□□□□ -0.55
HOXA1-201ENST00000343060 TTC14Q96N46 770 aa11.63□□□□□ -0.55
HOXA1-201ENST00000343060 FEZ1Q99689 392 aa11.63□□□□□ -0.55
HOXA1-201ENST00000343060 PYCARDQ9ULZ3 195 aa11.63□□□□□ -0.55
HOXA1-201ENST00000343060 CNPY2Q9Y2B0 182 aa11.63□□□□□ -0.55
HOXA1-201ENST00000343060 AP5Z1O43299 807 aa11.62□□□□□ -0.55
HOXA1-201ENST00000343060 LRRCC1Q9C099 1032 aa11.62□□□□□ -0.55
HOXA1-201ENST00000343060 FAM208AQ9UK61 1670 aaKnown RBP11.62□□□□□ -0.55
HOXA1-201ENST00000343060 CHAF1AQ13111 956 aaPredicted RBP11.62□□□□□ -0.55
HOXA1-201ENST00000343060 MPNDQ8N594 471 aa11.62□□□□□ -0.55
HOXA1-201ENST00000343060 UPF3BQ9BZI7 483 aaKnown RBP11.62□□□□□ -0.55
HOXA1-201ENST00000343060 F13A1P00488 732 aa11.61□□□□□ -0.55
HOXA1-201ENST00000343060 GNAI2P04899 355 aa11.61□□□□□ -0.55
HOXA1-201ENST00000343060 NME9Q86XW9 330 aa11.61□□□□□ -0.55
HOXA1-201ENST00000343060 RAD50Q92878 1312 aa11.61□□□□□ -0.55
HOXA1-201ENST00000343060 SPATA31D1Q6ZQQ2 1576 aa11.61□□□□□ -0.55
HOXA1-201ENST00000343060 NOL8Q76FK4 1167 aaKnown RBP11.61□□□□□ -0.55
HOXA1-201ENST00000343060 ATP6V1DQ9Y5K8 247 aa11.61□□□□□ -0.55
HOXA1-201ENST00000343060 FAM177BA6PVY3 158 aa11.6□□□□□ -0.55
HOXA1-201ENST00000343060 GOLGA6L6A8MZA4 724 aa11.6□□□□□ -0.55
HOXA1-201ENST00000343060 STX6O43752 255 aa11.6□□□□□ -0.55
HOXA1-201ENST00000343060 TSHZ3Q63HK5 1081 aa11.6□□□□□ -0.55
HOXA1-201ENST00000343060 EXOC6BQ9Y2D4 811 aa11.6□□□□□ -0.55
HOXA1-201ENST00000343060 PXDNLA1KZ92 1463 aa11.6□□□□□ -0.55
HOXA1-201ENST00000343060 SYT1P21579 422 aa11.59□□□□□ -0.55
HOXA1-201ENST00000343060 FOXD4L6Q3SYB3 417 aaPredicted RBP11.59□□□□□ -0.55
HOXA1-201ENST00000343060 FOXD4L3Q6VB84 417 aaPredicted RBP11.59□□□□□ -0.55
HOXA1-201ENST00000343060 IL25Q9H293 177 aa11.59□□□□□ -0.55
HOXA1-201ENST00000343060 NEO1Q92859 1461 aa11.59□□□□□ -0.55
HOXA1-201ENST00000343060 LRRC37A3O60309 1634 aa11.59□□□□□ -0.55
HOXA1-201ENST00000343060 ZBTB7CA1YPR0 619 aa11.59□□□□□ -0.55
HOXA1-201ENST00000343060 SLC4A2P04920 1241 aa11.59□□□□□ -0.55
HOXA1-201ENST00000343060 ATP8B2P98198 1209 aa11.59□□□□□ -0.55
HOXA1-201ENST00000343060 UNC5CLQ8IV45 518 aa11.59□□□□□ -0.55
HOXA1-201ENST00000343060 OGFRQ9NZT2 677 aa11.59□□□□□ -0.55
HOXA1-201ENST00000343060 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.59□□□□□ -0.55
HOXA1-201ENST00000343060 CHD2O14647 1828 aaKnown RBP11.59□□□□□ -0.55
HOXA1-201ENST00000343060 NALCNQ8IZF0 1738 aa11.58□□□□□ -0.55
HOXA1-201ENST00000343060 U2AF2P26368 475 aaKnown RBP eCLIP11.58□□□□□ -0.56
HOXA1-201ENST00000343060 NCBP1Q09161 790 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms