RNA–Protein interactions for RNA: ENST00000342669.7

SNRPD2-201, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-201ENST00000342669 IGSF1Q8N6C5 1336 aa13.82□□□□□ -0.2
SNRPD2-201ENST00000342669 ERVV-2B6SEH9 535 aa13.81□□□□□ -0.2
SNRPD2-201ENST00000342669 PLEKHO1Q53GL0 409 aaPredicted RBP13.81□□□□□ -0.2
SNRPD2-201ENST00000342669 MORC1Q86VD1 984 aa13.81□□□□□ -0.2
SNRPD2-201ENST00000342669 ATG3Q9NT62 314 aa13.81□□□□□ -0.2
SNRPD2-201ENST00000342669 GNPATO15228 680 aa13.8□□□□□ -0.2
SNRPD2-201ENST00000342669 ITPK1Q13572 414 aa13.8□□□□□ -0.2
SNRPD2-201ENST00000342669 SMIM5Q71RC9 77 aa13.8□□□□□ -0.2
SNRPD2-201ENST00000342669 C1QTNF8P60827 252 aa13.79□□□□□ -0.2
SNRPD2-201ENST00000342669 AMOTQ4VCS5 1084 aa13.79□□□□□ -0.2
SNRPD2-201ENST00000342669 DCAF5Q96JK2 942 aa13.79□□□□□ -0.2
SNRPD2-201ENST00000342669 KNSTRNQ9Y448 316 aa13.79□□□□□ -0.2
SNRPD2-201ENST00000342669 CABP4P57796 275 aa13.78□□□□□ -0.2
SNRPD2-201ENST00000342669 ZNF530Q6P9A1 599 aaPredicted RBP13.78□□□□□ -0.2
SNRPD2-201ENST00000342669 ZNF831Q5JPB2 1677 aa13.78□□□□□ -0.2
SNRPD2-201ENST00000342669 GIGYF1O75420 1035 aaPredicted RBP13.77□□□□□ -0.21
SNRPD2-201ENST00000342669 C1orf141Q5JVX7 400 aa13.77□□□□□ -0.21
SNRPD2-201ENST00000342669 RBM42Q9BTD8 480 aaKnown RBP13.77□□□□□ -0.21
SNRPD2-201ENST00000342669 RTCBQ9Y3I0 505 aaKnown RBP13.77□□□□□ -0.21
SNRPD2-201ENST00000342669 MTHFSP49914 203 aa13.76□□□□□ -0.21
SNRPD2-201ENST00000342669 TRAPPC3LQ5T215 181 aa13.76□□□□□ -0.21
SNRPD2-201ENST00000342669 COL5A3P25940 1745 aaPredicted RBP13.76□□□□□ -0.21
SNRPD2-201ENST00000342669 KDRP35968 1356 aa13.75□□□□□ -0.21
SNRPD2-201ENST00000342669 SENP3-EIF4A1A0A087X0R7 540 aa13.75□□□□□ -0.21
SNRPD2-201ENST00000342669 RC3H1Q5TC82 1133 aaKnown RBP13.75□□□□□ -0.21
SNRPD2-201ENST00000342669 SULT6B1Q6IMI4 303 aa13.75□□□□□ -0.21
SNRPD2-201ENST00000342669 AEBP1Q8IUX7 1158 aa13.75□□□□□ -0.21
SNRPD2-201ENST00000342669 KDM6AO15550 1401 aaPredicted RBP13.74□□□□□ -0.21
SNRPD2-201ENST00000342669 SLC4A9Q96Q91 983 aa13.74□□□□□ -0.21
SNRPD2-201ENST00000342669 MYH14Q7Z406 1995 aaKnown RBP13.74□□□□□ -0.21
SNRPD2-201ENST00000342669 SCN11AQ9UI33 1791 aa13.73□□□□□ -0.21
SNRPD2-201ENST00000342669 MMP10P09238 476 aa13.73□□□□□ -0.21
SNRPD2-201ENST00000342669 NLGN1Q8N2Q7 840 aa13.73□□□□□ -0.21
SNRPD2-201ENST00000342669 KIF13BQ9NQT8 1826 aa13.73□□□□□ -0.21
SNRPD2-201ENST00000342669 CNTNAP4Q9C0A0 1308 aa13.72□□□□□ -0.21
SNRPD2-201ENST00000342669 VIRMAQ69YN4 1812 aaKnown RBP13.72□□□□□ -0.21
SNRPD2-201ENST00000342669 RPS6KA4O75676 772 aa13.72□□□□□ -0.21
SNRPD2-201ENST00000342669 IL13P35225 146 aa13.72□□□□□ -0.21
SNRPD2-201ENST00000342669 RFC4P35249 363 aa13.72□□□□□ -0.21
SNRPD2-201ENST00000342669 AMER1Q5JTC6 1135 aaPredicted RBP13.72□□□□□ -0.21
SNRPD2-201ENST00000342669 ARHGEF1Q92888 912 aaKnown RBP13.72□□□□□ -0.21
SNRPD2-201ENST00000342669 WWC3Q9ULE0 1092 aa13.72□□□□□ -0.21
SNRPD2-201ENST00000342669 ATP10DQ9P241 1426 aa13.72□□□□□ -0.21
SNRPD2-201ENST00000342669 PTCD1O75127 700 aaKnown RBP13.71□□□□□ -0.21
SNRPD2-201ENST00000342669 NFATC2IPQ8NCF5 419 aa13.71□□□□□ -0.21
SNRPD2-201ENST00000342669 N4BP2Q86UW6 1770 aaPredicted RBP13.71□□□□□ -0.22
SNRPD2-201ENST00000342669 KIF7Q2M1P5 1343 aa13.7□□□□□ -0.22
SNRPD2-201ENST00000342669 CICQ96RK0 1608 aaPredicted RBP13.7□□□□□ -0.22
SNRPD2-201ENST00000342669 C4AP0C0L4 1744 aa13.7□□□□□ -0.22
SNRPD2-201ENST00000342669 TGFB2P61812 414 aa13.69□□□□□ -0.22
SNRPD2-201ENST00000342669 AKAP4Q5JQC9 854 aa13.69□□□□□ -0.22
SNRPD2-201ENST00000342669 GPBP1L1Q9HC44 474 aaPredicted RBP13.69□□□□□ -0.22
SNRPD2-201ENST00000342669 CCDC87Q9NVE4 849 aa13.69□□□□□ -0.22
SNRPD2-201ENST00000342669 PARP3Q9Y6F1 533 aa13.69□□□□□ -0.22
SNRPD2-201ENST00000342669 GYS1P13807 737 aa13.68□□□□□ -0.22
SNRPD2-201ENST00000342669 TJP1Q07157 1748 aa13.67□□□□□ -0.22
SNRPD2-201ENST00000342669 KIAA1551Q9HCM1 1747 aa13.67□□□□□ -0.22
SNRPD2-201ENST00000342669 CRKLP46109 303 aaKnown RBP13.67□□□□□ -0.22
SNRPD2-201ENST00000342669 ZNF526Q8TF50 670 aaPredicted RBP13.67□□□□□ -0.22
SNRPD2-201ENST00000342669 ADCY9O60503 1353 aa13.67□□□□□ -0.22
SNRPD2-201ENST00000342669 PXDNLA1KZ92 1463 aa13.67□□□□□ -0.22
SNRPD2-201ENST00000342669 C10orf71Q711Q0 1435 aa13.66□□□□□ -0.22
SNRPD2-201ENST00000342669 A0A0G2JLW4 131 aa13.66□□□□□ -0.22
SNRPD2-201ENST00000342669 DIAPH1O60610 1272 aaKnown RBP13.66□□□□□ -0.22
SNRPD2-201ENST00000342669 HMOX1P09601 288 aa13.66□□□□□ -0.22
SNRPD2-201ENST00000342669 CC2D1BQ5T0F9 858 aaKnown RBP13.66□□□□□ -0.22
SNRPD2-201ENST00000342669 SLC52A2Q9HAB3 445 aa13.66□□□□□ -0.22
SNRPD2-201ENST00000342669 BCS1LQ9Y276 419 aa13.66□□□□□ -0.22
SNRPD2-201ENST00000342669 CEP350Q5VT06 3117 aa13.66□□□□□ -0.22
SNRPD2-201ENST00000342669 BRCA1P38398 1863 aaKnown RBP13.65□□□□□ -0.22
SNRPD2-201ENST00000342669 PER1O15534 1290 aaPredicted RBP13.65□□□□□ -0.22
SNRPD2-201ENST00000342669 RNMTO43148 476 aaKnown RBP13.65□□□□□ -0.22
SNRPD2-201ENST00000342669 LGR6Q9HBX8 967 aa13.65□□□□□ -0.22
SNRPD2-201ENST00000342669 DPEP1P16444 411 aa13.64□□□□□ -0.23
SNRPD2-201ENST00000342669 INTS5Q6P9B9 1019 aaKnown RBP13.64□□□□□ -0.23
SNRPD2-201ENST00000342669 SRP68Q9UHB9 627 aaKnown RBP13.64□□□□□ -0.23
SNRPD2-201ENST00000342669 USP42Q9H9J4 1324 aaKnown RBP13.64□□□□□ -0.23
SNRPD2-201ENST00000342669 FCHSD2O94868 740 aa13.63□□□□□ -0.23
SNRPD2-201ENST00000342669 FKBP8Q14318 412 aa13.63□□□□□ -0.23
SNRPD2-201ENST00000342669 ARHGAP27Q6ZUM4 889 aa13.63□□□□□ -0.23
SNRPD2-201ENST00000342669 DNAJC10Q8IXB1 793 aa13.63□□□□□ -0.23
SNRPD2-201ENST00000342669 ARFGEF1Q9Y6D6 1849 aa13.62□□□□□ -0.23
SNRPD2-201ENST00000342669 MRC1P22897 1456 aa13.62□□□□□ -0.23
SNRPD2-201ENST00000342669 ZPR1O75312 459 aa13.62□□□□□ -0.23
SNRPD2-201ENST00000342669 SLC39A6Q13433 755 aa13.62□□□□□ -0.23
SNRPD2-201ENST00000342669 MTHFSDQ2M296 383 aaKnown RBP13.62□□□□□ -0.23
SNRPD2-201ENST00000342669 ADAMTS7Q9UKP4 1686 aa13.61□□□□□ -0.23
SNRPD2-201ENST00000342669 CNGB1Q14028 1251 aaPredicted RBP13.61□□□□□ -0.23
SNRPD2-201ENST00000342669 NPC1L1Q9UHC9 1359 aa13.6□□□□□ -0.23
SNRPD2-201ENST00000342669 CYP19A1P11511 503 aaPredicted RBP13.6□□□□□ -0.23
SNRPD2-201ENST00000342669 DDR1Q08345 913 aa13.6□□□□□ -0.23
SNRPD2-201ENST00000342669 PIM2Q9P1W9 311 aa13.6□□□□□ -0.23
SNRPD2-201ENST00000342669 SOS1Q07889 1333 aaPredicted RBP13.6□□□□□ -0.23
SNRPD2-201ENST00000342669 KCPQ6ZWJ8 1503 aa13.59□□□□□ -0.23
SNRPD2-201ENST00000342669 UBR2Q8IWV8 1755 aa13.59□□□□□ -0.23
SNRPD2-201ENST00000342669 U2SURPO15042 1029 aaKnown RBP13.59□□□□□ -0.23
SNRPD2-201ENST00000342669 KCNA3P22001 575 aa13.59□□□□□ -0.23
SNRPD2-201ENST00000342669 TM4SF1P30408 202 aa13.59□□□□□ -0.23
SNRPD2-201ENST00000342669 DALRD3Q5D0E6 543 aaKnown RBP13.59□□□□□ -0.23
SNRPD2-201ENST00000342669 USPL1Q5W0Q7 1092 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 1191.4 ms