RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 NAPBQ9H115 298 aa17.63■□□□□ 0.41
UBE3B-202ENST00000342494 SYNJ1O43426 1573 aa17.63■□□□□ 0.41
UBE3B-202ENST00000342494 CEP57L1Q8IYX8 460 aa17.63■□□□□ 0.41
UBE3B-202ENST00000342494 ADGRL1O94910 1474 aa17.63■□□□□ 0.41
UBE3B-202ENST00000342494 GLRX3O76003 335 aaKnown RBP17.63■□□□□ 0.41
UBE3B-202ENST00000342494 TMEM57Q8N5G2 664 aa17.63■□□□□ 0.41
UBE3B-202ENST00000342494 TRIM21P19474 475 aaKnown RBP17.62■□□□□ 0.41
UBE3B-202ENST00000342494 C6orf229H3BNL8 230 aa17.62■□□□□ 0.41
UBE3B-202ENST00000342494 WASLO00401 505 aaPredicted RBP17.62■□□□□ 0.41
UBE3B-202ENST00000342494 RAB11FIP3O75154 756 aa17.62■□□□□ 0.41
UBE3B-202ENST00000342494 SLF2Q8IX21 1173 aa17.62■□□□□ 0.41
UBE3B-202ENST00000342494 ANKRD18BA2A2Z9 1011 aa17.62■□□□□ 0.41
UBE3B-202ENST00000342494 NEBLO76041 1014 aa17.61■□□□□ 0.41
UBE3B-202ENST00000342494 DHX8Q14562 1220 aaKnown RBP17.61■□□□□ 0.41
UBE3B-202ENST00000342494 SPC24Q8NBT2 197 aa17.61■□□□□ 0.41
UBE3B-202ENST00000342494 ZNF444Q8N0Y2 327 aaPredicted RBP17.61■□□□□ 0.41
UBE3B-202ENST00000342494 CEP131Q9UPN4 1083 aa17.61■□□□□ 0.41
UBE3B-202ENST00000342494 CCDC96Q2M329 555 aa17.61■□□□□ 0.41
UBE3B-202ENST00000342494 BOLA2Q9H3K6 86 aa17.61■□□□□ 0.41
UBE3B-202ENST00000342494 CDK13Q14004 1512 aaKnown RBP17.61■□□□□ 0.41
UBE3B-202ENST00000342494 CCDC181Q5TID7 509 aa17.61■□□□□ 0.41
UBE3B-202ENST00000342494 MAGI1Q96QZ7 1491 aaPredicted RBP17.61■□□□□ 0.41
UBE3B-202ENST00000342494 EMILIN1Q9Y6C2 1016 aa17.6■□□□□ 0.41
UBE3B-202ENST00000342494 CASTP20810 708 aaKnown RBP17.6■□□□□ 0.41
UBE3B-202ENST00000342494 GPTP24298 496 aa17.6■□□□□ 0.41
UBE3B-202ENST00000342494 DDX11Q96FC9 970 aa17.6■□□□□ 0.41
UBE3B-202ENST00000342494 PPP4R3AQ6IN85 833 aa17.6■□□□□ 0.41
UBE3B-202ENST00000342494 CBFA2T2O43439 604 aa17.59■□□□□ 0.41
UBE3B-202ENST00000342494 MX1P20591 662 aa17.59■□□□□ 0.41
UBE3B-202ENST00000342494 HYPKQ9NX55 129 aa17.59■□□□□ 0.41
UBE3B-202ENST00000342494 CTCFLQ8NI51 663 aaPredicted RBP17.59■□□□□ 0.41
UBE3B-202ENST00000342494 CADPS2Q86UW7 1296 aa17.59■□□□□ 0.41
UBE3B-202ENST00000342494 TEX13AQ9BXU3 409 aaPredicted RBP17.59■□□□□ 0.41
UBE3B-202ENST00000342494 ZBTB3Q9H5J0 574 aa17.59■□□□□ 0.41
UBE3B-202ENST00000342494 RANBP6O60518 1105 aaKnown RBP17.59■□□□□ 0.41
UBE3B-202ENST00000342494 MYCNP04198 464 aaPredicted RBP17.59■□□□□ 0.41
UBE3B-202ENST00000342494 DNAAF4Q8WXU2 420 aa17.59■□□□□ 0.41
UBE3B-202ENST00000342494 DBF4Q9UBU7 674 aaPredicted RBP17.59■□□□□ 0.41
UBE3B-202ENST00000342494 A0A087WZG4 1122 aa17.58■□□□□ 0.41
UBE3B-202ENST00000342494 IDI1Q13907 227 aa17.58■□□□□ 0.41
UBE3B-202ENST00000342494 SUPT6HQ7KZ85 1726 aaKnown RBP17.58■□□□□ 0.41
UBE3B-202ENST00000342494 CCDC196A0A1B0GTZ2 297 aa17.58■□□□□ 0.4
UBE3B-202ENST00000342494 PPP1R12BO60237 982 aaPredicted RBP17.58■□□□□ 0.4
UBE3B-202ENST00000342494 IQCA1Q86XH1 822 aa17.58■□□□□ 0.4
UBE3B-202ENST00000342494 IFNL2Q8IZJ0 200 aa17.57■□□□□ 0.4
UBE3B-202ENST00000342494 CUL5Q93034 780 aa17.57■□□□□ 0.4
UBE3B-202ENST00000342494 DNMBPQ6XZF7 1577 aa17.57■□□□□ 0.4
UBE3B-202ENST00000342494 PRXQ9BXM0 1461 aa17.57■□□□□ 0.4
UBE3B-202ENST00000342494 AKNAQ7Z591 1439 aa17.57■□□□□ 0.4
UBE3B-202ENST00000342494 SEPT7Q16181 437 aaKnown RBP17.56■□□□□ 0.4
UBE3B-202ENST00000342494 DNAI2Q9GZS0 605 aa17.56■□□□□ 0.4
UBE3B-202ENST00000342494 DDX46Q7L014 1031 aaKnown RBP17.56■□□□□ 0.4
UBE3B-202ENST00000342494 ANKRD18AQ8IVF6 992 aa17.56■□□□□ 0.4
UBE3B-202ENST00000342494 RFC4P35249 363 aa17.56■□□□□ 0.4
UBE3B-202ENST00000342494 SLFN5Q08AF3 891 aa17.56■□□□□ 0.4
UBE3B-202ENST00000342494 CDC5LQ99459 802 aaKnown RBP17.56■□□□□ 0.4
UBE3B-202ENST00000342494 EIF5P55010 431 aaKnown RBP17.56■□□□□ 0.4
UBE3B-202ENST00000342494 AXDND1Q5T1B0 1012 aaPredicted RBP17.56■□□□□ 0.4
UBE3B-202ENST00000342494 PRPF40BQ6NWY9 871 aaKnown RBP17.56■□□□□ 0.4
UBE3B-202ENST00000342494 PDIA4P13667 645 aaKnown RBP17.55■□□□□ 0.4
UBE3B-202ENST00000342494 ZRSR2Q15696 482 aaKnown RBP17.55■□□□□ 0.4
UBE3B-202ENST00000342494 ZNF622Q969S3 477 aaKnown RBP eCLIP17.55■□□□□ 0.4
UBE3B-202ENST00000342494 ANKRD62A6NC57 917 aa17.55■□□□□ 0.4
UBE3B-202ENST00000342494 POTEJP0CG39 1038 aa17.55■□□□□ 0.4
UBE3B-202ENST00000342494 CCDC8Q9H0W5 538 aaPredicted RBP17.55■□□□□ 0.4
UBE3B-202ENST00000342494 FEZ1Q99689 392 aa17.55■□□□□ 0.4
UBE3B-202ENST00000342494 SSR1P43307 286 aaKnown RBP17.54■□□□□ 0.4
UBE3B-202ENST00000342494 NUP62CLQ9H1M0 184 aa17.54■□□□□ 0.4
UBE3B-202ENST00000342494 RNF41Q9H4P4 317 aaPredicted RBP17.54■□□□□ 0.4
UBE3B-202ENST00000342494 F6X3S4 739 aa17.54■□□□□ 0.4
UBE3B-202ENST00000342494 HMGXB3Q12766 1538 aa17.54■□□□□ 0.4
UBE3B-202ENST00000342494 ABCC11Q96J66 1382 aa17.54■□□□□ 0.4
UBE3B-202ENST00000342494 GOLGA6L10A6NI86 522 aa17.54■□□□□ 0.4
UBE3B-202ENST00000342494 SMARCA5O60264 1052 aaPredicted RBP17.54■□□□□ 0.4
UBE3B-202ENST00000342494 ALDH1L2Q3SY69 923 aa17.54■□□□□ 0.4
UBE3B-202ENST00000342494 UPF3BQ9BZI7 483 aaKnown RBP17.54■□□□□ 0.4
UBE3B-202ENST00000342494 TIAM1Q13009 1591 aa17.54■□□□□ 0.4
UBE3B-202ENST00000342494 ZNF213O14771 459 aa17.53■□□□□ 0.4
UBE3B-202ENST00000342494 LDHCP07864 332 aa17.53■□□□□ 0.4
UBE3B-202ENST00000342494 PPP1R42Q7Z4L9 355 aa17.53■□□□□ 0.4
UBE3B-202ENST00000342494 CHRNA2Q15822 529 aa17.53■□□□□ 0.4
UBE3B-202ENST00000342494 TOP2BQ02880 1626 aa17.53■□□□□ 0.4
UBE3B-202ENST00000342494 ADGRF5Q8IZF2 1346 aa17.53■□□□□ 0.4
UBE3B-202ENST00000342494 CCDC191Q8NCU4 936 aa17.52■□□□□ 0.4
UBE3B-202ENST00000342494 UBAP1LF5GYI3 381 aa17.52■□□□□ 0.4
UBE3B-202ENST00000342494 RAB34Q9BZG1 259 aa17.52■□□□□ 0.4
UBE3B-202ENST00000342494 EHMT1Q9H9B1 1298 aa17.52■□□□□ 0.4
UBE3B-202ENST00000342494 SLC12A7Q9Y666 1083 aa17.52■□□□□ 0.4
UBE3B-202ENST00000342494 H0YHG0 523 aa17.52■□□□□ 0.4
UBE3B-202ENST00000342494 LDHAL6AQ6ZMR3 332 aa17.52■□□□□ 0.4
UBE3B-202ENST00000342494 CCDC82Q8N4S0 544 aa17.52■□□□□ 0.4
UBE3B-202ENST00000342494 SSH1Q8WYL5 1049 aa17.52■□□□□ 0.4
UBE3B-202ENST00000342494 LRRFIP2Q9Y608 721 aaKnown RBP17.52■□□□□ 0.4
UBE3B-202ENST00000342494 TOM1O60784 492 aa17.52■□□□□ 0.39
UBE3B-202ENST00000342494 TTC21BQ7Z4L5 1316 aa17.52■□□□□ 0.39
UBE3B-202ENST00000342494 DENND4BO75064 1496 aaPredicted RBP17.52■□□□□ 0.39
UBE3B-202ENST00000342494 FAM177A1Q8N128 213 aaPredicted RBP17.52■□□□□ 0.39
UBE3B-202ENST00000342494 IQGAP2Q13576 1575 aa17.51■□□□□ 0.39
UBE3B-202ENST00000342494 SMTNL1A8MU46 457 aa17.51■□□□□ 0.39
UBE3B-202ENST00000342494 TMEM87AQ8NBN3 555 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms