RNA–Protein interactions for RNA: ENST00000342018.12

GTF3C5-201, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 5 BASIC

Gene GTF3C5, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-201ENST00000342018 TSPYL6Q8N831 410 aa24.99■■□□□ 1.59
GTF3C5-201ENST00000342018 C8orf58Q8NAV2 365 aa24.99■■□□□ 1.59
GTF3C5-201ENST00000342018 KCNQ3O43525 872 aa24.97■■□□□ 1.59
GTF3C5-201ENST00000342018 ZNF772Q68DY9 489 aaPredicted RBP24.97■■□□□ 1.59
GTF3C5-201ENST00000342018 MARCH10Q8NA82 808 aaPredicted RBP24.96■■□□□ 1.59
GTF3C5-201ENST00000342018 BABAM1Q9NWV8 329 aa24.96■■□□□ 1.59
GTF3C5-201ENST00000342018 TWISTNBQ3B726 338 aaPredicted RBP24.96■■□□□ 1.59
GTF3C5-201ENST00000342018 ERVV-2B6SEH9 535 aa24.95■■□□□ 1.58
GTF3C5-201ENST00000342018 SLC39A6Q13433 755 aa24.95■■□□□ 1.58
GTF3C5-201ENST00000342018 BCL2L13Q9BXK5 485 aa24.95■■□□□ 1.58
GTF3C5-201ENST00000342018 SIPA1L3O60292 1781 aaPredicted RBP24.94■■□□□ 1.58
GTF3C5-201ENST00000342018 BCAR3O75815 825 aa24.94■■□□□ 1.58
GTF3C5-201ENST00000342018 CT47B1P0C2W7 299 aaPredicted RBP24.93■■□□□ 1.58
GTF3C5-201ENST00000342018 SYTL4Q96C24 671 aaPredicted RBP24.93■■□□□ 1.58
GTF3C5-201ENST00000342018 MRC1P22897 1456 aa24.93■■□□□ 1.58
GTF3C5-201ENST00000342018 VAMP4O75379 141 aa24.92■■□□□ 1.58
GTF3C5-201ENST00000342018 RARSP54136 660 aaKnown RBP24.92■■□□□ 1.58
GTF3C5-201ENST00000342018 KAT6BQ8WYB5 2073 aa24.92■■□□□ 1.58
GTF3C5-201ENST00000342018 TOGARAM1Q9Y4F4 1720 aa24.92■■□□□ 1.58
GTF3C5-201ENST00000342018 SEPT12Q8IYM1 358 aa24.92■■□□□ 1.58
GTF3C5-201ENST00000342018 TMOD3Q9NYL9 352 aa24.92■■□□□ 1.58
GTF3C5-201ENST00000342018 THSD7AQ9UPZ6 1657 aa24.92■■□□□ 1.58
GTF3C5-201ENST00000342018 KDM3BQ7LBC6 1761 aa24.91■■□□□ 1.58
GTF3C5-201ENST00000342018 TCERG1O14776 1098 aaKnown RBP24.91■■□□□ 1.58
GTF3C5-201ENST00000342018 EIF4A1P60842 406 aaKnown RBP24.9■■□□□ 1.58
GTF3C5-201ENST00000342018 IRX6P78412 446 aaPredicted RBP24.9■■□□□ 1.58
GTF3C5-201ENST00000342018 ACSBG1Q96GR2 724 aa24.9■■□□□ 1.58
GTF3C5-201ENST00000342018 PLIN1O60240 522 aa24.9■■□□□ 1.58
GTF3C5-201ENST00000342018 ZNF790Q6PG37 636 aa24.9■■□□□ 1.58
GTF3C5-201ENST00000342018 TTC5Q8N0Z6 440 aa24.89■■□□□ 1.58
GTF3C5-201ENST00000342018 ONECUT3O60422 494 aaPredicted RBP24.88■■□□□ 1.57
GTF3C5-201ENST00000342018 RRP1P56182 461 aaKnown RBP24.88■■□□□ 1.57
GTF3C5-201ENST00000342018 FAM182BQ5T319 152 aa24.88■■□□□ 1.57
GTF3C5-201ENST00000342018 SMC4Q9NTJ3 1288 aa24.88■■□□□ 1.57
GTF3C5-201ENST00000342018 NEFLP07196 543 aa24.88■■□□□ 1.57
GTF3C5-201ENST00000342018 PRIM1P49642 420 aaKnown RBP24.88■■□□□ 1.57
GTF3C5-201ENST00000342018 SSH1Q8WYL5 1049 aa24.88■■□□□ 1.57
GTF3C5-201ENST00000342018 RBM6P78332 1123 aaKnown RBP24.87■■□□□ 1.57
GTF3C5-201ENST00000342018 PIGBQ92521 554 aa24.86■■□□□ 1.57
GTF3C5-201ENST00000342018 NECTIN2Q92692 538 aa24.86■■□□□ 1.57
GTF3C5-201ENST00000342018 DOT1LQ8TEK3 1739 aa24.86■■□□□ 1.57
GTF3C5-201ENST00000342018 FRAT1Q92837 279 aaPredicted RBP24.86■■□□□ 1.57
GTF3C5-201ENST00000342018 CANXP27824 592 aaKnown RBP24.84■■□□□ 1.57
GTF3C5-201ENST00000342018 ITGB4P16144 1822 aa24.84■■□□□ 1.57
GTF3C5-201ENST00000342018 RNF123Q5XPI4 1314 aa24.84■■□□□ 1.57
GTF3C5-201ENST00000342018 RGS17Q9UGC6 210 aaPredicted RBP24.84■■□□□ 1.57
GTF3C5-201ENST00000342018 GTF3C3Q9Y5Q9 886 aa24.84■■□□□ 1.57
GTF3C5-201ENST00000342018 ZNF428Q96B54 188 aa24.83■■□□□ 1.57
GTF3C5-201ENST00000342018 ZNF496Q96IT1 587 aaPredicted RBP24.83■■□□□ 1.57
GTF3C5-201ENST00000342018 EIF2S2P20042 333 aaKnown RBP24.82■■□□□ 1.56
GTF3C5-201ENST00000342018 ALDH1L2Q3SY69 923 aa24.82■■□□□ 1.56
GTF3C5-201ENST00000342018 PRAMEF22A3QJZ6 481 aa24.82■■□□□ 1.56
GTF3C5-201ENST00000342018 RXRBP28702 533 aa24.82■■□□□ 1.56
GTF3C5-201ENST00000342018 ASAP1Q9ULH1 1129 aa24.82■■□□□ 1.56
GTF3C5-201ENST00000342018 PTCD1O75127 700 aaKnown RBP24.81■■□□□ 1.56
GTF3C5-201ENST00000342018 FKBP8Q14318 412 aa24.81■■□□□ 1.56
GTF3C5-201ENST00000342018 ILDR1Q86SU0 546 aaPredicted RBP24.81■■□□□ 1.56
GTF3C5-201ENST00000342018 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.81■■□□□ 1.56
GTF3C5-201ENST00000342018 BCL9O00512 1426 aa24.81■■□□□ 1.56
GTF3C5-201ENST00000342018 KCNQ2O43526 872 aa24.8■■□□□ 1.56
GTF3C5-201ENST00000342018 FMNL2Q96PY5 1086 aa24.8■■□□□ 1.56
GTF3C5-201ENST00000342018 GIGYF1O75420 1035 aaPredicted RBP24.8■■□□□ 1.56
GTF3C5-201ENST00000342018 HDGFL1Q5TGJ6 251 aa24.8■■□□□ 1.56
GTF3C5-201ENST00000342018 POTEAQ6S8J7 498 aa24.78■■□□□ 1.56
GTF3C5-201ENST00000342018 MRPL50Q8N5N7 158 aaKnown RBP24.78■■□□□ 1.56
GTF3C5-201ENST00000342018 ATG3Q9NT62 314 aa24.78■■□□□ 1.56
GTF3C5-201ENST00000342018 NOB1Q9ULX3 412 aaKnown RBP24.78■■□□□ 1.56
GTF3C5-201ENST00000342018 CCDC30Q5VVM6 783 aa24.77■■□□□ 1.56
GTF3C5-201ENST00000342018 HEG1Q9ULI3 1381 aa24.77■■□□□ 1.56
GTF3C5-201ENST00000342018 SOS1Q07889 1333 aaPredicted RBP24.77■■□□□ 1.56
GTF3C5-201ENST00000342018 KRT27Q7Z3Y8 459 aa24.76■■□□□ 1.55
GTF3C5-201ENST00000342018 STK31Q9BXU1 1019 aa24.76■■□□□ 1.55
GTF3C5-201ENST00000342018 PAPPAQ13219 1627 aa24.76■■□□□ 1.55
GTF3C5-201ENST00000342018 SLC4A2P04920 1241 aa24.76■■□□□ 1.55
GTF3C5-201ENST00000342018 HOXB7P09629 217 aa24.76■■□□□ 1.55
GTF3C5-201ENST00000342018 C20orf194Q5TEA3 1177 aa24.76■■□□□ 1.55
GTF3C5-201ENST00000342018 RBM42Q9BTD8 480 aaKnown RBP24.76■■□□□ 1.55
GTF3C5-201ENST00000342018 SNRPA1P09661 255 aaKnown RBP24.75■■□□□ 1.55
GTF3C5-201ENST00000342018 BRWD3Q6RI45 1802 aa24.75■■□□□ 1.55
GTF3C5-201ENST00000342018 KCPQ6ZWJ8 1503 aa24.74■■□□□ 1.55
GTF3C5-201ENST00000342018 KIF16BQ96L93 1317 aa24.74■■□□□ 1.55
GTF3C5-201ENST00000342018 TNNQ9UQP3 1299 aa24.74■■□□□ 1.55
GTF3C5-201ENST00000342018 ZKSCAN2Q63HK3 967 aa24.73■■□□□ 1.55
GTF3C5-201ENST00000342018 PTF1AQ7RTS3 328 aa24.73■■□□□ 1.55
GTF3C5-201ENST00000342018 C5P01031 1676 aa24.73■■□□□ 1.55
GTF3C5-201ENST00000342018 UBR2Q8IWV8 1755 aa24.73■■□□□ 1.55
GTF3C5-201ENST00000342018 CLUAP1Q96AJ1 413 aa24.73■■□□□ 1.55
GTF3C5-201ENST00000342018 USP16Q9Y5T5 823 aa24.73■■□□□ 1.55
GTF3C5-201ENST00000342018 CHPF2Q9P2E5 772 aa24.72■■□□□ 1.55
GTF3C5-201ENST00000342018 IPO8O15397 1037 aaKnown RBP24.7■■□□□ 1.54
GTF3C5-201ENST00000342018 ANXA1P04083 346 aa24.7■■□□□ 1.54
GTF3C5-201ENST00000342018 BRPF1P55201 1214 aaPredicted RBP24.7■■□□□ 1.54
GTF3C5-201ENST00000342018 RGS12O14924 1447 aa24.69■■□□□ 1.54
GTF3C5-201ENST00000342018 G2E3Q7L622 706 aa24.69■■□□□ 1.54
GTF3C5-201ENST00000342018 PANK1Q8TE04 598 aa24.69■■□□□ 1.54
GTF3C5-201ENST00000342018 CHMP4AQ9BY43 222 aa24.69■■□□□ 1.54
GTF3C5-201ENST00000342018 TRIM27P14373 513 aa24.69■■□□□ 1.54
GTF3C5-201ENST00000342018 ATF7IPQ6VMQ6 1270 aa24.69■■□□□ 1.54
GTF3C5-201ENST00000342018 FAM196AQ6ZSG2 479 aa24.68■■□□□ 1.54
GTF3C5-201ENST00000342018 FTSJ3Q8IY81 847 aaKnown RBP24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms