RNA–Protein interactions for RNA: ENST00000341919.7

NFIC-201, Transcript of nuclear factor I C, humanhuman

TSL 1 (best) BASIC

Gene NFIC, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-201ENST00000341919 ZNF316A6NFI3 1004 aaPredicted RBP21.14■□□□□ 0.98
NFIC-201ENST00000341919 ITPK1Q13572 414 aa21.14■□□□□ 0.98
NFIC-201ENST00000341919 SLC4A9Q96Q91 983 aa21.14■□□□□ 0.97
NFIC-201ENST00000341919 PNPLA7Q6ZV29 1317 aa21.13■□□□□ 0.97
NFIC-201ENST00000341919 SLC39A6Q13433 755 aa21.13■□□□□ 0.97
NFIC-201ENST00000341919 LINC00116Q8NCU8 138 aa21.13■□□□□ 0.97
NFIC-201ENST00000341919 SLC52A2Q9HAB3 445 aa21.12■□□□□ 0.97
NFIC-201ENST00000341919 CASZ1Q86V15 1759 aa21.12■□□□□ 0.97
NFIC-201ENST00000341919 FCHSD2O94868 740 aa21.11■□□□□ 0.97
NFIC-201ENST00000341919 AMIGO3Q86WK7 504 aa21.11■□□□□ 0.97
NFIC-201ENST00000341919 IL17REQ8NFR9 667 aa21.11■□□□□ 0.97
NFIC-201ENST00000341919 SCN11AQ9UI33 1791 aa21.11■□□□□ 0.97
NFIC-201ENST00000341919 GNAT3A8MTJ3 354 aa21.1■□□□□ 0.97
NFIC-201ENST00000341919 COL23A1Q86Y22 540 aaPredicted RBP21.1■□□□□ 0.97
NFIC-201ENST00000341919 PPP1R1BQ9UD71 204 aaPredicted RBP21.1■□□□□ 0.97
NFIC-201ENST00000341919 C5P01031 1676 aa21.1■□□□□ 0.97
NFIC-201ENST00000341919 PHF14O94880 888 aa21.1■□□□□ 0.97
NFIC-201ENST00000341919 GAS2L2Q8NHY3 880 aa21.1■□□□□ 0.97
NFIC-201ENST00000341919 LRP5O75197 1615 aa21.09■□□□□ 0.97
NFIC-201ENST00000341919 VIRMAQ69YN4 1812 aaKnown RBP21.09■□□□□ 0.97
NFIC-201ENST00000341919 TAF1LQ8IZX4 1826 aa21.09■□□□□ 0.97
NFIC-201ENST00000341919 TUBGCP6Q96RT7 1819 aa21.09■□□□□ 0.97
NFIC-201ENST00000341919 AK7Q96M32 723 aa21.08■□□□□ 0.97
NFIC-201ENST00000341919 PRKRIP1Q9H875 184 aaPredicted RBP21.08■□□□□ 0.97
NFIC-201ENST00000341919 MYBBP1AQ9BQG0 1328 aaKnown RBP21.08■□□□□ 0.96
NFIC-201ENST00000341919 PTGER2P43116 358 aa21.07■□□□□ 0.96
NFIC-201ENST00000341919 DCTN1Q14203 1278 aa21.07■□□□□ 0.96
NFIC-201ENST00000341919 MTFR1LQ9H019 292 aa21.07■□□□□ 0.96
NFIC-201ENST00000341919 MAP3K5Q99683 1374 aa21.07■□□□□ 0.96
NFIC-201ENST00000341919 MCM10Q7L590 875 aa21.06■□□□□ 0.96
NFIC-201ENST00000341919 MSL1Q68DK7 614 aa21.06■□□□□ 0.96
NFIC-201ENST00000341919 C4BP0C0L5 1744 aa21.05■□□□□ 0.96
NFIC-201ENST00000341919 TEFQ10587 303 aa21.05■□□□□ 0.96
NFIC-201ENST00000341919 GNPATO15228 680 aa21.04■□□□□ 0.96
NFIC-201ENST00000341919 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.02■□□□□ 0.96
NFIC-201ENST00000341919 PLEKHF1Q96S99 279 aa21.02■□□□□ 0.96
NFIC-201ENST00000341919 CCDC146Q8IYE0 955 aa21.02■□□□□ 0.95
NFIC-201ENST00000341919 RTF1Q92541 710 aaKnown RBP21.02■□□□□ 0.95
NFIC-201ENST00000341919 KCNQ3O43525 872 aa21.01■□□□□ 0.95
NFIC-201ENST00000341919 NEFMP07197 916 aa21.01■□□□□ 0.95
NFIC-201ENST00000341919 DNAJC10Q8IXB1 793 aa21.01■□□□□ 0.95
NFIC-201ENST00000341919 SGIP1Q9BQI5 828 aa21.01■□□□□ 0.95
NFIC-201ENST00000341919 KLHL34Q8N239 644 aa21■□□□□ 0.95
NFIC-201ENST00000341919 SLC16A10Q8TF71 515 aa21■□□□□ 0.95
NFIC-201ENST00000341919 QSER1Q2KHR3 1735 aa20.99■□□□□ 0.95
NFIC-201ENST00000341919 CCDC184Q52MB2 194 aa20.98■□□□□ 0.95
NFIC-201ENST00000341919 ARXQ96QS3 562 aa20.98■□□□□ 0.95
NFIC-201ENST00000341919 MIS18AQ9NYP9 233 aa20.98■□□□□ 0.95
NFIC-201ENST00000341919 ADAMTS7Q9UKP4 1686 aa20.98■□□□□ 0.95
NFIC-201ENST00000341919 BTBD11A6QL63 1104 aa20.97■□□□□ 0.95
NFIC-201ENST00000341919 CRKLP46109 303 aaKnown RBP20.97■□□□□ 0.95
NFIC-201ENST00000341919 TTC5Q8N0Z6 440 aa20.97■□□□□ 0.95
NFIC-201ENST00000341919 FLAD1Q8NFF5 587 aa20.97■□□□□ 0.95
NFIC-201ENST00000341919 THUMPD2Q9BTF0 503 aaKnown RBP20.97■□□□□ 0.95
NFIC-201ENST00000341919 UBR3Q6ZT12 1888 aa20.97■□□□□ 0.95
NFIC-201ENST00000341919 MRC1P22897 1456 aa20.97■□□□□ 0.95
NFIC-201ENST00000341919 MAPK8IP3Q9UPT6 1336 aa20.97■□□□□ 0.95
NFIC-201ENST00000341919 ZNF496Q96IT1 587 aaPredicted RBP20.97■□□□□ 0.95
NFIC-201ENST00000341919 FHDC1Q9C0D6 1143 aaPredicted RBP20.97■□□□□ 0.95
NFIC-201ENST00000341919 ADAMTS8Q9UP79 889 aa20.97■□□□□ 0.95
NFIC-201ENST00000341919 RRP7AQ9Y3A4 280 aaKnown RBP20.97■□□□□ 0.95
NFIC-201ENST00000341919 RTCBQ9Y3I0 505 aaKnown RBP20.97■□□□□ 0.95
NFIC-201ENST00000341919 HMGB2P26583 209 aaKnown RBP20.96■□□□□ 0.95
NFIC-201ENST00000341919 WDR43Q15061 677 aaKnown RBP eCLIP20.96■□□□□ 0.95
NFIC-201ENST00000341919 NEUROD2Q15784 382 aa20.96■□□□□ 0.95
NFIC-201ENST00000341919 TRAPPC3LQ5T215 181 aa20.96■□□□□ 0.95
NFIC-201ENST00000341919 ZNF790Q6PG37 636 aa20.96■□□□□ 0.95
NFIC-201ENST00000341919 MYH14Q7Z406 1995 aaKnown RBP20.95■□□□□ 0.94
NFIC-201ENST00000341919 CEMIPQ8WUJ3 1361 aa20.95■□□□□ 0.94
NFIC-201ENST00000341919 SSFA2P28290 1259 aa20.95■□□□□ 0.94
NFIC-201ENST00000341919 POLD1P28340 1107 aa20.95■□□□□ 0.94
NFIC-201ENST00000341919 NFE2L2Q16236 605 aa20.95■□□□□ 0.94
NFIC-201ENST00000341919 ARHGEF1Q92888 912 aaKnown RBP20.95■□□□□ 0.94
NFIC-201ENST00000341919 PNNQ9H307 717 aaKnown RBP20.95■□□□□ 0.94
NFIC-201ENST00000341919 RC3H1Q5TC82 1133 aaKnown RBP20.94■□□□□ 0.94
NFIC-201ENST00000341919 INTS5Q6P9B9 1019 aaKnown RBP20.94■□□□□ 0.94
NFIC-201ENST00000341919 DLG5Q8TDM6 1919 aa20.94■□□□□ 0.94
NFIC-201ENST00000341919 COL5A3P25940 1745 aaPredicted RBP20.94■□□□□ 0.94
NFIC-201ENST00000341919 TJP1Q07157 1748 aa20.94■□□□□ 0.94
NFIC-201ENST00000341919 RPS6KA4O75676 772 aa20.93■□□□□ 0.94
NFIC-201ENST00000341919 KCPQ6ZWJ8 1503 aa20.93■□□□□ 0.94
NFIC-201ENST00000341919 SENP3-EIF4A1A0A087X0R7 540 aa20.93■□□□□ 0.94
NFIC-201ENST00000341919 CYP19A1P11511 503 aaPredicted RBP20.93■□□□□ 0.94
NFIC-201ENST00000341919 RIPK4P57078 832 aa20.93■□□□□ 0.94
NFIC-201ENST00000341919 SYT17Q9BSW7 474 aa20.93■□□□□ 0.94
NFIC-201ENST00000341919 CNTNAP4Q9C0A0 1308 aa20.92■□□□□ 0.94
NFIC-201ENST00000341919 SIPA1L3O60292 1781 aaPredicted RBP20.92■□□□□ 0.94
NFIC-201ENST00000341919 PRAMEF22A3QJZ6 481 aa20.91■□□□□ 0.94
NFIC-201ENST00000341919 HTATSF1O43719 755 aaKnown RBP20.91■□□□□ 0.94
NFIC-201ENST00000341919 RFC4P35249 363 aa20.91■□□□□ 0.94
NFIC-201ENST00000341919 CCDC87Q9NVE4 849 aa20.91■□□□□ 0.94
NFIC-201ENST00000341919 CANXP27824 592 aaKnown RBP20.9■□□□□ 0.94
NFIC-201ENST00000341919 TAF7Q15545 349 aaPredicted RBP20.9■□□□□ 0.94
NFIC-201ENST00000341919 SRP68Q9UHB9 627 aaKnown RBP20.9■□□□□ 0.94
NFIC-201ENST00000341919 ZNF831Q5JPB2 1677 aa20.9■□□□□ 0.94
NFIC-201ENST00000341919 ANP32CO43423 234 aa20.89■□□□□ 0.94
NFIC-201ENST00000341919 TMPOP42166 694 aaKnown RBP20.89■□□□□ 0.94
NFIC-201ENST00000341919 FMNL2Q96PY5 1086 aa20.89■□□□□ 0.93
NFIC-201ENST00000341919 ZBTB1Q9Y2K1 713 aa20.89■□□□□ 0.93
NFIC-201ENST00000341919 RUNDC1Q96C34 613 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms