RNA–Protein interactions for RNA: ENST00000341517.8

PDE4B-202, Transcript of phosphodiesterase 4B, humanhuman

TSL 1 (best)

Gene PDE4B, Length 3,175 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4B-202ENST00000341517 TMOD3Q9NYL9 352 aa13.09□□□□□ -0.31
PDE4B-202ENST00000341517 TGFB2P61812 414 aa13.08□□□□□ -0.32
PDE4B-202ENST00000341517 EIF4A2Q14240 407 aaKnown RBP13.08□□□□□ -0.32
PDE4B-202ENST00000341517 ATP10DQ9P241 1426 aa13.08□□□□□ -0.32
PDE4B-202ENST00000341517 KDM6AO15550 1401 aaPredicted RBP13.07□□□□□ -0.32
PDE4B-202ENST00000341517 LINC00116Q8NCU8 138 aa13.07□□□□□ -0.32
PDE4B-202ENST00000341517 SIPA1L3O60292 1781 aaPredicted RBP13.07□□□□□ -0.32
PDE4B-202ENST00000341517 PXDNLA1KZ92 1463 aa13.07□□□□□ -0.32
PDE4B-202ENST00000341517 NPC1L1Q9UHC9 1359 aa13.07□□□□□ -0.32
PDE4B-202ENST00000341517 MYH14Q7Z406 1995 aaKnown RBP13.07□□□□□ -0.32
PDE4B-202ENST00000341517 PLEKHO1Q53GL0 409 aaPredicted RBP13.06□□□□□ -0.32
PDE4B-202ENST00000341517 MPRIPQ6WCQ1 1025 aa13.06□□□□□ -0.32
PDE4B-202ENST00000341517 ATG3Q9NT62 314 aa13.06□□□□□ -0.32
PDE4B-202ENST00000341517 TNRC6CQ9HCJ0 1690 aaKnown RBP13.06□□□□□ -0.32
PDE4B-202ENST00000341517 NLGN1Q8N2Q7 840 aa13.05□□□□□ -0.32
PDE4B-202ENST00000341517 N4BP2Q86UW6 1770 aaPredicted RBP13.05□□□□□ -0.32
PDE4B-202ENST00000341517 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.05□□□□□ -0.32
PDE4B-202ENST00000341517 EIF4G2P78344 907 aaKnown RBP eCLIP13.05□□□□□ -0.32
PDE4B-202ENST00000341517 SRCAPQ6ZRS2 3230 aa13.04□□□□□ -0.32
PDE4B-202ENST00000341517 RPS6KA4O75676 772 aa13.04□□□□□ -0.32
PDE4B-202ENST00000341517 ITPK1Q13572 414 aa13.04□□□□□ -0.32
PDE4B-202ENST00000341517 KCNQ4P56696 695 aa13.03□□□□□ -0.32
PDE4B-202ENST00000341517 ARFGEF2Q9Y6D5 1785 aa13.03□□□□□ -0.32
PDE4B-202ENST00000341517 ATP6V1AP38606 617 aa13.02□□□□□ -0.33
PDE4B-202ENST00000341517 RTCBQ9Y3I0 505 aaKnown RBP13.01□□□□□ -0.33
PDE4B-202ENST00000341517 KCPQ6ZWJ8 1503 aa13.01□□□□□ -0.33
PDE4B-202ENST00000341517 SCN7AQ01118 1682 aa13.01□□□□□ -0.33
PDE4B-202ENST00000341517 ASAP1Q9ULH1 1129 aa13.01□□□□□ -0.33
PDE4B-202ENST00000341517 ZC3H4Q9UPT8 1303 aaKnown RBP13.01□□□□□ -0.33
PDE4B-202ENST00000341517 AFDNP55196 1824 aaKnown RBP13.01□□□□□ -0.33
PDE4B-202ENST00000341517 SBF1O95248 1867 aa13.01□□□□□ -0.33
PDE4B-202ENST00000341517 MSH5O43196 834 aa13□□□□□ -0.33
PDE4B-202ENST00000341517 TRAPPC3LQ5T215 181 aa13□□□□□ -0.33
PDE4B-202ENST00000341517 AMIGO3Q86WK7 504 aa13□□□□□ -0.33
PDE4B-202ENST00000341517 CCDC87Q9NVE4 849 aa13□□□□□ -0.33
PDE4B-202ENST00000341517 SENP3-EIF4A1A0A087X0R7 540 aa13□□□□□ -0.33
PDE4B-202ENST00000341517 GNPATO15228 680 aa12.99□□□□□ -0.33
PDE4B-202ENST00000341517 IL13P35225 146 aa12.99□□□□□ -0.33
PDE4B-202ENST00000341517 COL3A1P02461 1466 aaPredicted RBP12.99□□□□□ -0.33
PDE4B-202ENST00000341517 VSIG10Q8N0Z9 540 aa12.98□□□□□ -0.33
PDE4B-202ENST00000341517 SLC4A9Q96Q91 983 aa12.98□□□□□ -0.33
PDE4B-202ENST00000341517 BCORQ6W2J9 1755 aa12.98□□□□□ -0.33
PDE4B-202ENST00000341517 MSL1Q68DK7 614 aa12.98□□□□□ -0.33
PDE4B-202ENST00000341517 PANK3Q9H999 370 aa12.98□□□□□ -0.33
PDE4B-202ENST00000341517 HSPA5P11021 654 aaKnown RBP12.97□□□□□ -0.33
PDE4B-202ENST00000341517 AKAP4Q5JQC9 854 aa12.97□□□□□ -0.33
PDE4B-202ENST00000341517 WDR90Q96KV7 1748 aa12.97□□□□□ -0.33
PDE4B-202ENST00000341517 DICER1Q9UPY3 1922 aaKnown RBP12.97□□□□□ -0.33
PDE4B-202ENST00000341517 GYS1P13807 737 aa12.97□□□□□ -0.33
PDE4B-202ENST00000341517 AMER1Q5JTC6 1135 aaPredicted RBP12.96□□□□□ -0.33
PDE4B-202ENST00000341517 ZNF530Q6P9A1 599 aaPredicted RBP12.96□□□□□ -0.33
PDE4B-202ENST00000341517 PDZRN3Q9UPQ7 1066 aa12.96□□□□□ -0.33
PDE4B-202ENST00000341517 USP42Q9H9J4 1324 aaKnown RBP12.96□□□□□ -0.33
PDE4B-202ENST00000341517 HSPA6P17066 643 aa12.96□□□□□ -0.33
PDE4B-202ENST00000341517 CABP4P57796 275 aa12.96□□□□□ -0.33
PDE4B-202ENST00000341517 C1orf141Q5JVX7 400 aa12.96□□□□□ -0.33
PDE4B-202ENST00000341517 KLHL34Q8N239 644 aa12.96□□□□□ -0.33
PDE4B-202ENST00000341517 RGL2O15211 777 aa12.95□□□□□ -0.34
PDE4B-202ENST00000341517 MMP10P09238 476 aa12.95□□□□□ -0.34
PDE4B-202ENST00000341517 ARHGEF1Q92888 912 aaKnown RBP12.95□□□□□ -0.34
PDE4B-202ENST00000341517 GPBP1L1Q9HC44 474 aaPredicted RBP12.95□□□□□ -0.34
PDE4B-202ENST00000341517 MORC1Q86VD1 984 aa12.95□□□□□ -0.34
PDE4B-202ENST00000341517 PELP1Q8IZL8 1130 aaKnown RBP12.94□□□□□ -0.34
PDE4B-202ENST00000341517 PARP3Q9Y6F1 533 aa12.94□□□□□ -0.34
PDE4B-202ENST00000341517 SOS1Q07889 1333 aaPredicted RBP12.94□□□□□ -0.34
PDE4B-202ENST00000341517 KIF3CO14782 793 aa12.93□□□□□ -0.34
PDE4B-202ENST00000341517 PPM1GO15355 546 aaPredicted RBP12.93□□□□□ -0.34
PDE4B-202ENST00000341517 TM4SF1P30408 202 aa12.93□□□□□ -0.34
PDE4B-202ENST00000341517 MTHFSP49914 203 aa12.93□□□□□ -0.34
PDE4B-202ENST00000341517 SLC52A2Q9HAB3 445 aa12.93□□□□□ -0.34
PDE4B-202ENST00000341517 KNSTRNQ9Y448 316 aa12.93□□□□□ -0.34
PDE4B-202ENST00000341517 TIAM2Q8IVF5 1701 aa12.93□□□□□ -0.34
PDE4B-202ENST00000341517 RFC4P35249 363 aa12.93□□□□□ -0.34
PDE4B-202ENST00000341517 PHF14O94880 888 aa12.92□□□□□ -0.34
PDE4B-202ENST00000341517 KCNA3P22001 575 aa12.92□□□□□ -0.34
PDE4B-202ENST00000341517 INTS5Q6P9B9 1019 aaKnown RBP12.92□□□□□ -0.34
PDE4B-202ENST00000341517 RBM46Q8TBY0 533 aaKnown RBP12.92□□□□□ -0.34
PDE4B-202ENST00000341517 CRKLP46109 303 aaKnown RBP12.91□□□□□ -0.34
PDE4B-202ENST00000341517 APLP1P51693 650 aa12.91□□□□□ -0.34
PDE4B-202ENST00000341517 ANKRD31Q8N7Z5 1873 aa12.91□□□□□ -0.34
PDE4B-202ENST00000341517 PER1O15534 1290 aaPredicted RBP12.91□□□□□ -0.34
PDE4B-202ENST00000341517 FER1L6Q2WGJ9 1857 aa12.91□□□□□ -0.34
PDE4B-202ENST00000341517 FSTL1Q12841 308 aa12.9□□□□□ -0.34
PDE4B-202ENST00000341517 LAMB4A4D0S4 1761 aa12.9□□□□□ -0.34
PDE4B-202ENST00000341517 RNMTO43148 476 aaKnown RBP12.9□□□□□ -0.34
PDE4B-202ENST00000341517 TOMM70O94826 608 aa12.9□□□□□ -0.34
PDE4B-202ENST00000341517 PIM2Q9P1W9 311 aa12.9□□□□□ -0.34
PDE4B-202ENST00000341517 NARFQ9UHQ1 456 aa12.9□□□□□ -0.34
PDE4B-202ENST00000341517 A0A087WZG4 1122 aa12.89□□□□□ -0.35
PDE4B-202ENST00000341517 IFFO2Q5TF58 517 aa12.89□□□□□ -0.35
PDE4B-202ENST00000341517 POLRMTO00411 1230 aaKnown RBP12.89□□□□□ -0.35
PDE4B-202ENST00000341517 SULT6B1Q6IMI4 303 aa12.89□□□□□ -0.35
PDE4B-202ENST00000341517 TEX13AQ9BXU3 409 aaPredicted RBP12.89□□□□□ -0.35
PDE4B-202ENST00000341517 RBM42Q9BTD8 480 aaKnown RBP12.89□□□□□ -0.35
PDE4B-202ENST00000341517 CYP19A1P11511 503 aaPredicted RBP12.88□□□□□ -0.35
PDE4B-202ENST00000341517 DPEP1P16444 411 aa12.88□□□□□ -0.35
PDE4B-202ENST00000341517 KIF7Q2M1P5 1343 aa12.88□□□□□ -0.35
PDE4B-202ENST00000341517 COL15A1P39059 1388 aa12.88□□□□□ -0.35
PDE4B-202ENST00000341517 AEBP1Q8IUX7 1158 aa12.87□□□□□ -0.35
PDE4B-202ENST00000341517 NFATC2IPQ8NCF5 419 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms