RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 KCNH5Q8NCM2 988 aa13.34□□□□□ -0.27
TNC-201ENST00000341037 CALRP27797 417 aaKnown RBP13.34□□□□□ -0.27
TNC-201ENST00000341037 DZIP1Q86YF9 867 aaKnown RBP13.34□□□□□ -0.27
TNC-201ENST00000341037 CEP131Q9UPN4 1083 aa13.34□□□□□ -0.27
TNC-201ENST00000341037 PPP6R1Q9UPN7 881 aa13.34□□□□□ -0.27
TNC-201ENST00000341037 AKAP2Q9Y2D5 859 aa13.34□□□□□ -0.27
TNC-201ENST00000341037 ANKRD18AQ8IVF6 992 aa13.34□□□□□ -0.27
TNC-201ENST00000341037 GRPEL1Q9HAV7 217 aa13.34□□□□□ -0.27
TNC-201ENST00000341037 TIAM1Q13009 1591 aa13.34□□□□□ -0.27
TNC-201ENST00000341037 EPRSP07814 1512 aaKnown RBP13.34□□□□□ -0.27
TNC-201ENST00000341037 WDR97A6NE52 1622 aa13.34□□□□□ -0.27
TNC-201ENST00000341037 IFIT1P09914 478 aaKnown RBP13.33□□□□□ -0.27
TNC-201ENST00000341037 LRRFIP2Q9Y608 721 aaKnown RBP13.33□□□□□ -0.27
TNC-201ENST00000341037 GUCY1B3Q02153 619 aa13.33□□□□□ -0.28
TNC-201ENST00000341037 CCDC96Q2M329 555 aa13.33□□□□□ -0.28
TNC-201ENST00000341037 MYCNP04198 464 aaPredicted RBP13.33□□□□□ -0.28
TNC-201ENST00000341037 MX1P20591 662 aa13.33□□□□□ -0.28
TNC-201ENST00000341037 SLC4A8Q2Y0W8 1093 aa13.33□□□□□ -0.28
TNC-201ENST00000341037 NME9Q86XW9 330 aa13.33□□□□□ -0.28
TNC-201ENST00000341037 UBA5Q9GZZ9 404 aa13.33□□□□□ -0.28
TNC-201ENST00000341037 NCAPD3P42695 1498 aa13.33□□□□□ -0.28
TNC-201ENST00000341037 CCDC112Q8NEF3 446 aa13.33□□□□□ -0.28
TNC-201ENST00000341037 BACH2Q9BYV9 841 aa13.33□□□□□ -0.28
TNC-201ENST00000341037 CC2D2AQ9P2K1 1620 aa13.32□□□□□ -0.28
TNC-201ENST00000341037 CCDC8Q9H0W5 538 aaPredicted RBP13.32□□□□□ -0.28
TNC-201ENST00000341037 ARHGEF11O15085 1522 aa13.32□□□□□ -0.28
TNC-201ENST00000341037 TTLL12Q14166 644 aaPredicted RBP13.32□□□□□ -0.28
TNC-201ENST00000341037 FERMT3Q86UX7 667 aa13.32□□□□□ -0.28
TNC-201ENST00000341037 FILIP1Q7Z7B0 1213 aa13.32□□□□□ -0.28
TNC-201ENST00000341037 CCDC82Q8N4S0 544 aa13.32□□□□□ -0.28
TNC-201ENST00000341037 KIF1BPQ96EK5 621 aa13.32□□□□□ -0.28
TNC-201ENST00000341037 F6X3S4 739 aa13.32□□□□□ -0.28
TNC-201ENST00000341037 TNIP1Q15025 636 aa13.32□□□□□ -0.28
TNC-201ENST00000341037 SMTNL1A8MU46 457 aa13.32□□□□□ -0.28
TNC-201ENST00000341037 RPAP2Q8IXW5 612 aaPredicted RBP13.32□□□□□ -0.28
TNC-201ENST00000341037 RPGRQ92834 1020 aaKnown RBP13.32□□□□□ -0.28
TNC-201ENST00000341037 RANBP6O60518 1105 aaKnown RBP13.31□□□□□ -0.28
TNC-201ENST00000341037 DESP17661 470 aa13.31□□□□□ -0.28
TNC-201ENST00000341037 FAM135AQ9P2D6 1515 aa13.31□□□□□ -0.28
TNC-201ENST00000341037 GBP2P32456 591 aaPredicted RBP13.31□□□□□ -0.28
TNC-201ENST00000341037 SLFN5Q08AF3 891 aa13.31□□□□□ -0.28
TNC-201ENST00000341037 NAPBQ9H115 298 aa13.31□□□□□ -0.28
TNC-201ENST00000341037 TRMT112Q9UI30 125 aaKnown RBP13.31□□□□□ -0.28
TNC-201ENST00000341037 EPB41L2O43491 1005 aaKnown RBP13.31□□□□□ -0.28
TNC-201ENST00000341037 LARP1Q6PKG0 1096 aaKnown RBP13.31□□□□□ -0.28
TNC-201ENST00000341037 RAB11FIP3O75154 756 aa13.31□□□□□ -0.28
TNC-201ENST00000341037 TOPBP1Q92547 1522 aa13.31□□□□□ -0.28
TNC-201ENST00000341037 JAKMIP3Q5VZ66 844 aa13.31□□□□□ -0.28
TNC-201ENST00000341037 KLHL10Q6JEL2 608 aa13.31□□□□□ -0.28
TNC-201ENST00000341037 U3KPZ7 1027 aaPredicted RBP13.31□□□□□ -0.28
TNC-201ENST00000341037 SYCE3A1L190 88 aa13.3□□□□□ -0.28
TNC-201ENST00000341037 SLC5A1P13866 664 aa13.3□□□□□ -0.28
TNC-201ENST00000341037 CFAP100Q494V2 611 aa13.3□□□□□ -0.28
TNC-201ENST00000341037 PAXIP1Q6ZW49 1069 aaPredicted RBP13.3□□□□□ -0.28
TNC-201ENST00000341037 LIG1P18858 919 aa13.3□□□□□ -0.28
TNC-201ENST00000341037 GPTP24298 496 aa13.3□□□□□ -0.28
TNC-201ENST00000341037 TAF4BQ92750 862 aa13.3□□□□□ -0.28
TNC-201ENST00000341037 ZNF287Q9HBT7 754 aa13.3□□□□□ -0.28
TNC-201ENST00000341037 IFIT5Q13325 482 aaKnown RBP13.3□□□□□ -0.28
TNC-201ENST00000341037 TAF7Q15545 349 aaPredicted RBP13.3□□□□□ -0.28
TNC-201ENST00000341037 WDR78Q5VTH9 848 aa13.3□□□□□ -0.28
TNC-201ENST00000341037 UQCRHLA0A096LP55 91 aa13.3□□□□□ -0.28
TNC-201ENST00000341037 UQCRHP07919 91 aa13.3□□□□□ -0.28
TNC-201ENST00000341037 ZNF397Q8NF99 534 aaPredicted RBP13.3□□□□□ -0.28
TNC-201ENST00000341037 LARP6Q9BRS8 491 aaKnown RBP13.3□□□□□ -0.28
TNC-201ENST00000341037 TAF3Q5VWG9 929 aa13.29□□□□□ -0.28
TNC-201ENST00000341037 CCDC61Q9Y6R9 512 aa13.29□□□□□ -0.28
TNC-201ENST00000341037 MTERF4Q7Z6M4 381 aaKnown RBP13.29□□□□□ -0.28
TNC-201ENST00000341037 MAP3K11Q16584 847 aa13.29□□□□□ -0.28
TNC-201ENST00000341037 IQCEQ6IPM2 695 aa13.29□□□□□ -0.28
TNC-201ENST00000341037 ZNF444Q8N0Y2 327 aaPredicted RBP13.29□□□□□ -0.28
TNC-201ENST00000341037 ERLIN1O75477 346 aa13.28□□□□□ -0.28
TNC-201ENST00000341037 KIAA0754O94854 1291 aa13.28□□□□□ -0.28
TNC-201ENST00000341037 EMILIN1Q9Y6C2 1016 aa13.28□□□□□ -0.28
TNC-201ENST00000341037 CCDC97Q96F63 343 aaPredicted RBP13.28□□□□□ -0.28
TNC-201ENST00000341037 TMX1Q9H3N1 280 aa13.28□□□□□ -0.28
TNC-201ENST00000341037 PPP4R3AQ6IN85 833 aa13.28□□□□□ -0.28
TNC-201ENST00000341037 CCDC144CPQ8IYA2 1237 aa13.28□□□□□ -0.28
TNC-201ENST00000341037 HMGN5P82970 282 aaKnown RBP13.28□□□□□ -0.28
TNC-201ENST00000341037 TSG101Q99816 390 aa13.28□□□□□ -0.28
TNC-201ENST00000341037 GLRX3O76003 335 aaKnown RBP13.28□□□□□ -0.28
TNC-201ENST00000341037 SLC12A7Q9Y666 1083 aa13.28□□□□□ -0.28
TNC-201ENST00000341037 MAP3K12Q12852 859 aa13.28□□□□□ -0.28
TNC-201ENST00000341037 SKAP1Q86WV1 359 aa13.28□□□□□ -0.28
TNC-201ENST00000341037 ANKRD18BA2A2Z9 1011 aa13.27□□□□□ -0.28
TNC-201ENST00000341037 SSRP1Q08945 709 aaKnown RBP13.27□□□□□ -0.28
TNC-201ENST00000341037 CUL5Q93034 780 aa13.27□□□□□ -0.28
TNC-201ENST00000341037 KIF14Q15058 1648 aa13.27□□□□□ -0.28
TNC-201ENST00000341037 TOP2BQ02880 1626 aa13.27□□□□□ -0.28
TNC-201ENST00000341037 PPP1R12BO60237 982 aaPredicted RBP13.27□□□□□ -0.28
TNC-201ENST00000341037 POTEJP0CG39 1038 aa13.27□□□□□ -0.28
TNC-201ENST00000341037 TRIM21P19474 475 aaKnown RBP13.27□□□□□ -0.28
TNC-201ENST00000341037 HSP90AB3PQ58FF7 597 aa13.27□□□□□ -0.29
TNC-201ENST00000341037 CCDC102AQ96A19 550 aa13.27□□□□□ -0.29
TNC-201ENST00000341037 ZBTB3Q9H5J0 574 aa13.27□□□□□ -0.29
TNC-201ENST00000341037 CAMSAP2Q08AD1 1489 aa13.27□□□□□ -0.29
TNC-201ENST00000341037 CCDC66A2RUB6 948 aa13.27□□□□□ -0.29
TNC-201ENST00000341037 TRMT1LQ7Z2T5 733 aaKnown RBP13.27□□□□□ -0.29
TNC-201ENST00000341037 ZNF213O14771 459 aa13.27□□□□□ -0.29
TNC-201ENST00000341037 CCT2P78371 535 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms