RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 ATP10DQ9P241 1426 aa9.2□□□□□ -0.94
NUP43-201ENST00000340413 TWISTNBQ3B726 338 aaPredicted RBP9.2□□□□□ -0.94
NUP43-201ENST00000340413 ABCC4O15439 1325 aa9.19□□□□□ -0.94
NUP43-201ENST00000340413 SOX12O15370 315 aa9.19□□□□□ -0.94
NUP43-201ENST00000340413 SLC52A2Q9HAB3 445 aa9.19□□□□□ -0.94
NUP43-201ENST00000340413 BCL9LQ86UU0 1499 aa9.19□□□□□ -0.94
NUP43-201ENST00000340413 TOM1L2Q6ZVM7 507 aa9.19□□□□□ -0.94
NUP43-201ENST00000340413 TSPYL4Q9UJ04 414 aa9.19□□□□□ -0.94
NUP43-201ENST00000340413 RGL2O15211 777 aa9.18□□□□□ -0.94
NUP43-201ENST00000340413 EVA1CP58658 441 aa9.18□□□□□ -0.94
NUP43-201ENST00000340413 NEUROD2Q15784 382 aa9.18□□□□□ -0.94
NUP43-201ENST00000340413 CCDC30Q5VVM6 783 aa9.18□□□□□ -0.94
NUP43-201ENST00000340413 UNC5CLQ8IV45 518 aa9.18□□□□□ -0.94
NUP43-201ENST00000340413 VSIG10Q8N0Z9 540 aa9.18□□□□□ -0.94
NUP43-201ENST00000340413 CABLES1Q8TDN4 633 aa9.18□□□□□ -0.94
NUP43-201ENST00000340413 LTV1Q96GA3 475 aaPredicted RBP9.18□□□□□ -0.94
NUP43-201ENST00000340413 TEFQ10587 303 aa9.18□□□□□ -0.94
NUP43-201ENST00000340413 ATF7IPQ6VMQ6 1270 aa9.18□□□□□ -0.94
NUP43-201ENST00000340413 EIF4A1P60842 406 aaKnown RBP9.17□□□□□ -0.94
NUP43-201ENST00000340413 FKBP8Q14318 412 aa9.17□□□□□ -0.94
NUP43-201ENST00000340413 DDX19BQ9UMR2 479 aa9.17□□□□□ -0.94
NUP43-201ENST00000340413 TJP1Q07157 1748 aa9.17□□□□□ -0.94
NUP43-201ENST00000340413 NUP188Q5SRE5 1749 aa9.17□□□□□ -0.94
NUP43-201ENST00000340413 TEX13AQ9BXU3 409 aaPredicted RBP9.17□□□□□ -0.94
NUP43-201ENST00000340413 BTG4Q9NY30 223 aa9.17□□□□□ -0.94
NUP43-201ENST00000340413 COL5A3P25940 1745 aaPredicted RBP9.16□□□□□ -0.94
NUP43-201ENST00000340413 CHRNA2Q15822 529 aa9.16□□□□□ -0.94
NUP43-201ENST00000340413 MCM10Q7L590 875 aa9.16□□□□□ -0.94
NUP43-201ENST00000340413 SSH1Q8WYL5 1049 aa9.16□□□□□ -0.94
NUP43-201ENST00000340413 SMC4Q9NTJ3 1288 aa9.16□□□□□ -0.94
NUP43-201ENST00000340413 SALL2Q9Y467 1007 aaPredicted RBP9.16□□□□□ -0.94
NUP43-201ENST00000340413 ONECUT3O60422 494 aaPredicted RBP9.16□□□□□ -0.94
NUP43-201ENST00000340413 DZIP1LQ8IYY4 767 aaKnown RBP9.16□□□□□ -0.94
NUP43-201ENST00000340413 COL15A1P39059 1388 aa9.16□□□□□ -0.94
NUP43-201ENST00000340413 INTS3Q68E01 1043 aaKnown RBP9.15□□□□□ -0.94
NUP43-201ENST00000340413 LARP1Q6PKG0 1096 aaKnown RBP9.15□□□□□ -0.94
NUP43-201ENST00000340413 TSR2Q969E8 191 aaKnown RBP9.15□□□□□ -0.94
NUP43-201ENST00000340413 CYP27B1O15528 508 aa9.15□□□□□ -0.94
NUP43-201ENST00000340413 MVPQ14764 893 aaKnown RBP9.15□□□□□ -0.94
NUP43-201ENST00000340413 USHBP1Q8N6Y0 703 aa9.15□□□□□ -0.94
NUP43-201ENST00000340413 LY75O60449 1722 aa9.15□□□□□ -0.94
NUP43-201ENST00000340413 BTBD11A6QL63 1104 aa9.15□□□□□ -0.95
NUP43-201ENST00000340413 HDAC5Q9UQL6 1122 aa9.15□□□□□ -0.95
NUP43-201ENST00000340413 C8orf58Q8NAV2 365 aa9.14□□□□□ -0.95
NUP43-201ENST00000340413 STK31Q9BXU1 1019 aa9.14□□□□□ -0.95
NUP43-201ENST00000340413 SBF2Q86WG5 1849 aa9.14□□□□□ -0.95
NUP43-201ENST00000340413 CCT4P50991 539 aaKnown RBP9.14□□□□□ -0.95
NUP43-201ENST00000340413 ANKRD36CQ5JPF3 1778 aa9.13□□□□□ -0.95
NUP43-201ENST00000340413 ARFGEF2Q9Y6D5 1785 aa9.13□□□□□ -0.95
NUP43-201ENST00000340413 FMNL2Q96PY5 1086 aa9.13□□□□□ -0.95
NUP43-201ENST00000340413 HYPKQ9NX55 129 aa9.13□□□□□ -0.95
NUP43-201ENST00000340413 ZBTB7CA1YPR0 619 aa9.13□□□□□ -0.95
NUP43-201ENST00000340413 CENPQQ7L2Z9 268 aaPredicted RBP9.13□□□□□ -0.95
NUP43-201ENST00000340413 BCAR3O75815 825 aa9.12□□□□□ -0.95
NUP43-201ENST00000340413 ZNF790Q6PG37 636 aa9.12□□□□□ -0.95
NUP43-201ENST00000340413 EXOC5O00471 708 aa9.12□□□□□ -0.95
NUP43-201ENST00000340413 CANXP27824 592 aaKnown RBP9.12□□□□□ -0.95
NUP43-201ENST00000340413 ILDR1Q86SU0 546 aaPredicted RBP9.12□□□□□ -0.95
NUP43-201ENST00000340413 DBF4Q9UBU7 674 aaPredicted RBP9.12□□□□□ -0.95
NUP43-201ENST00000340413 GIGYF1O75420 1035 aaPredicted RBP9.12□□□□□ -0.95
NUP43-201ENST00000340413 HDAC1Q13547 482 aaPredicted RBP9.12□□□□□ -0.95
NUP43-201ENST00000340413 LGR6Q9HBX8 967 aa9.12□□□□□ -0.95
NUP43-201ENST00000340413 BCORQ6W2J9 1755 aa9.12□□□□□ -0.95
NUP43-201ENST00000340413 KDM2BQ8NHM5 1336 aa9.12□□□□□ -0.95
NUP43-201ENST00000340413 SNRPA1P09661 255 aaKnown RBP9.11□□□□□ -0.95
NUP43-201ENST00000340413 TRIM27P14373 513 aa9.11□□□□□ -0.95
NUP43-201ENST00000340413 CABP4P57796 275 aa9.11□□□□□ -0.95
NUP43-201ENST00000340413 DCTN1Q14203 1278 aa9.11□□□□□ -0.95
NUP43-201ENST00000340413 THUMPD2Q9BTF0 503 aaKnown RBP9.11□□□□□ -0.95
NUP43-201ENST00000340413 CLUAP1Q96AJ1 413 aa9.11□□□□□ -0.95
NUP43-201ENST00000340413 CRBNQ96SW2 442 aa9.11□□□□□ -0.95
NUP43-201ENST00000340413 NOB1Q9ULX3 412 aaKnown RBP9.11□□□□□ -0.95
NUP43-201ENST00000340413 SMARCC1Q92922 1105 aaPredicted RBP9.11□□□□□ -0.95
NUP43-201ENST00000340413 FTSJ3Q8IY81 847 aaKnown RBP9.1□□□□□ -0.95
NUP43-201ENST00000340413 DDX21Q9NR30 783 aaKnown RBP eCLIP9.1□□□□□ -0.95
NUP43-201ENST00000340413 PIP4K2BP78356 416 aa9.1□□□□□ -0.95
NUP43-201ENST00000340413 TTC5Q8N0Z6 440 aa9.1□□□□□ -0.95
NUP43-201ENST00000340413 TSPYL6Q8N831 410 aa9.1□□□□□ -0.95
NUP43-201ENST00000340413 TRPC5Q9UL62 973 aaPredicted RBP9.1□□□□□ -0.95
NUP43-201ENST00000340413 LAMB2P55268 1798 aa9.1□□□□□ -0.95
NUP43-201ENST00000340413 ALDH1L1O75891 902 aa9.1□□□□□ -0.95
NUP43-201ENST00000340413 MPRIPQ6WCQ1 1025 aa9.1□□□□□ -0.95
NUP43-201ENST00000340413 LAS1LQ9Y4W2 734 aaKnown RBP9.1□□□□□ -0.95
NUP43-201ENST00000340413 DDX58O95786 925 aaKnown RBP9.09□□□□□ -0.95
NUP43-201ENST00000340413 QSER1Q2KHR3 1735 aa9.09□□□□□ -0.95
NUP43-201ENST00000340413 DDB1Q16531 1140 aa9.09□□□□□ -0.95
NUP43-201ENST00000340413 HDGFL1Q5TGJ6 251 aa9.09□□□□□ -0.95
NUP43-201ENST00000340413 STRN4Q9NRL3 753 aa9.09□□□□□ -0.95
NUP43-201ENST00000340413 ZBTB40Q9NUA8 1239 aa9.09□□□□□ -0.95
NUP43-201ENST00000340413 EXOC6Q8TAG9 804 aa9.08□□□□□ -0.96
NUP43-201ENST00000340413 UTYO14607 1347 aa9.08□□□□□ -0.96
NUP43-201ENST00000340413 BTAF1O14981 1849 aa9.08□□□□□ -0.96
NUP43-201ENST00000340413 SCN7AQ01118 1682 aa9.08□□□□□ -0.96
NUP43-201ENST00000340413 HSPA1LP34931 641 aa9.08□□□□□ -0.96
NUP43-201ENST00000340413 RWDD1Q9H446 243 aaPredicted RBP9.08□□□□□ -0.96
NUP43-201ENST00000340413 TMOD3Q9NYL9 352 aa9.08□□□□□ -0.96
NUP43-201ENST00000340413 ZNF772Q68DY9 489 aaPredicted RBP9.07□□□□□ -0.96
NUP43-201ENST00000340413 RPAP2Q8IXW5 612 aaPredicted RBP9.07□□□□□ -0.96
NUP43-201ENST00000340413 CCDC136Q96JN2 1154 aa9.07□□□□□ -0.96
NUP43-201ENST00000340413 GNAI3P08754 354 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms