RNA–Protein interactions for RNA: ENST00000339600.5

NDUFA4-201, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA4, Length 2,130 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-201ENST00000339600 ZSCAN16Q9H4T2 348 aaPredicted RBP8.54□□□□□ -1.04
NDUFA4-201ENST00000339600 USP25Q9UHP3 1055 aa8.54□□□□□ -1.04
NDUFA4-201ENST00000339600 GCC2Q8IWJ2 1684 aa8.54□□□□□ -1.04
NDUFA4-201ENST00000339600 CD109Q6YHK3 1445 aa8.54□□□□□ -1.04
NDUFA4-201ENST00000339600 IGF1RP08069 1367 aa8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 ERBB3P21860 1342 aa8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 EIF3CLB5ME19 914 aaKnown RBP8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 CT47B1P0C2W7 299 aaPredicted RBP8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 PNMA6AP0CW24 399 aaPredicted RBP8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 ERCC3P19447 782 aa8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 RBM5P52756 815 aaKnown RBP eCLIP8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 CORO7P57737 925 aa8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 DNAJC14Q6Y2X3 702 aaPredicted RBP8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 STAG1Q8WVM7 1258 aa8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 ERO1AQ96HE7 468 aa8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 EIF3CQ99613 913 aaKnown RBP8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 USP47Q96K76 1375 aa8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 ANKRD18BA2A2Z9 1011 aa8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 SGSM2O43147 1006 aa8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 SMC2O95347 1197 aa8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 IVLP07476 585 aa8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 SCP2P22307 547 aa8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 ADCY2Q08462 1091 aa8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 TSHZ1Q6ZSZ6 1077 aa8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 ERCC4Q92889 916 aaPredicted RBP8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 MIEF2Q96C03 454 aa8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 ETAA1Q9NY74 926 aa8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 NSFL1CQ9UNZ2 370 aaKnown RBP8.53□□□□□ -1.04
NDUFA4-201ENST00000339600 PLXNC1O60486 1568 aa8.52□□□□□ -1.04
NDUFA4-201ENST00000339600 DISP1Q96F81 1524 aa8.52□□□□□ -1.05
NDUFA4-201ENST00000339600 NKTRP30414 1462 aaKnown RBP8.52□□□□□ -1.05
NDUFA4-201ENST00000339600 SCAF11Q99590 1463 aaKnown RBP8.52□□□□□ -1.05
NDUFA4-201ENST00000339600 HTATSF1O43719 755 aaKnown RBP8.52□□□□□ -1.05
NDUFA4-201ENST00000339600 RPS6KA5O75582 802 aa8.52□□□□□ -1.05
NDUFA4-201ENST00000339600 TPM1P09493 284 aa8.52□□□□□ -1.05
NDUFA4-201ENST00000339600 SLFN5Q08AF3 891 aa8.52□□□□□ -1.05
NDUFA4-201ENST00000339600 SETDB1Q15047 1291 aa8.52□□□□□ -1.05
NDUFA4-201ENST00000339600 FOXD4L1Q9NU39 408 aa8.52□□□□□ -1.05
NDUFA4-201ENST00000339600 IQGAP2Q13576 1575 aa8.51□□□□□ -1.05
NDUFA4-201ENST00000339600 FGD6Q6ZV73 1430 aa8.51□□□□□ -1.05
NDUFA4-201ENST00000339600 KDM4AO75164 1064 aa8.51□□□□□ -1.05
NDUFA4-201ENST00000339600 ZRANB2O95218 330 aaKnown RBP eCLIP8.51□□□□□ -1.05
NDUFA4-201ENST00000339600 NEFHP12036 1026 aa8.51□□□□□ -1.05
NDUFA4-201ENST00000339600 ACTN2P35609 894 aa8.51□□□□□ -1.05
NDUFA4-201ENST00000339600 CCT2P78371 535 aaKnown RBP8.51□□□□□ -1.05
NDUFA4-201ENST00000339600 GOLGA2Q08379 1002 aa8.51□□□□□ -1.05
NDUFA4-201ENST00000339600 REXO1L1PQ8IX06 675 aa8.51□□□□□ -1.05
NDUFA4-201ENST00000339600 EXOC4Q96A65 974 aa8.51□□□□□ -1.05
NDUFA4-201ENST00000339600 ZNF215Q9UL58 517 aaPredicted RBP8.51□□□□□ -1.05
NDUFA4-201ENST00000339600 MBD5Q9P267 1494 aa8.51□□□□□ -1.05
NDUFA4-201ENST00000339600 ELF2Q15723 593 aa8.51□□□□□ -1.05
NDUFA4-201ENST00000339600 NAIF1Q69YI7 327 aaPredicted RBP8.51□□□□□ -1.05
NDUFA4-201ENST00000339600 TTC19Q6DKK2 380 aaPredicted RBP8.51□□□□□ -1.05
NDUFA4-201ENST00000339600 SYAP1Q96A49 352 aaPredicted RBP8.51□□□□□ -1.05
NDUFA4-201ENST00000339600 A1CFQ9NQ94 594 aaKnown RBP8.51□□□□□ -1.05
NDUFA4-201ENST00000339600 KIF14Q15058 1648 aa8.51□□□□□ -1.05
NDUFA4-201ENST00000339600 MADDQ8WXG6 1647 aa8.5□□□□□ -1.05
NDUFA4-201ENST00000339600 ATP8B1O43520 1251 aa8.5□□□□□ -1.05
NDUFA4-201ENST00000339600 PAX7P23759 505 aa8.5□□□□□ -1.05
NDUFA4-201ENST00000339600 AK7Q96M32 723 aa8.5□□□□□ -1.05
NDUFA4-201ENST00000339600 EXOC6BQ9Y2D4 811 aa8.5□□□□□ -1.05
NDUFA4-201ENST00000339600 KIF2AO00139 706 aaPredicted RBP8.5□□□□□ -1.05
NDUFA4-201ENST00000339600 TMTC2Q8N394 836 aa8.5□□□□□ -1.05
NDUFA4-201ENST00000339600 KLHL23Q8NBE8 558 aa8.5□□□□□ -1.05
NDUFA4-201ENST00000339600 RTF1Q92541 710 aaKnown RBP8.5□□□□□ -1.05
NDUFA4-201ENST00000339600 CWC22Q9HCG8 908 aaKnown RBP8.5□□□□□ -1.05
NDUFA4-201ENST00000339600 PCDHB15Q9Y5E8 787 aa8.5□□□□□ -1.05
NDUFA4-201ENST00000339600 FAM135AQ9P2D6 1515 aa8.49□□□□□ -1.05
NDUFA4-201ENST00000339600 BCAR3O75815 825 aa8.49□□□□□ -1.05
NDUFA4-201ENST00000339600 TBC1D8BQ0IIM8 1120 aa8.49□□□□□ -1.05
NDUFA4-201ENST00000339600 GRIK3Q13003 919 aa8.49□□□□□ -1.05
NDUFA4-201ENST00000339600 RINLQ6ZS11 566 aa8.49□□□□□ -1.05
NDUFA4-201ENST00000339600 EFCAB13Q8IY85 973 aa8.49□□□□□ -1.05
NDUFA4-201ENST00000339600 C16orf45Q96MC5 204 aaPredicted RBP8.49□□□□□ -1.05
NDUFA4-201ENST00000339600 RWDD1Q9H446 243 aaPredicted RBP8.49□□□□□ -1.05
NDUFA4-201ENST00000339600 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.49□□□□□ -1.05
NDUFA4-201ENST00000339600 UGGT2Q9NYU1 1516 aa8.49□□□□□ -1.05
NDUFA4-201ENST00000339600 POLR3GO15318 223 aaPredicted RBP8.48□□□□□ -1.05
NDUFA4-201ENST00000339600 NRDCO43847 1150 aa8.48□□□□□ -1.05
NDUFA4-201ENST00000339600 CAND2O75155 1236 aa8.48□□□□□ -1.05
NDUFA4-201ENST00000339600 FAM163BP0C2L3 166 aa8.48□□□□□ -1.05
NDUFA4-201ENST00000339600 CLCN6P51797 869 aa8.48□□□□□ -1.05
NDUFA4-201ENST00000339600 CCDC186Q7Z3E2 898 aa8.48□□□□□ -1.05
NDUFA4-201ENST00000339600 FMNL3Q8IVF7 1028 aa8.48□□□□□ -1.05
NDUFA4-201ENST00000339600 TRAF1Q13077 416 aa8.48□□□□□ -1.05
NDUFA4-201ENST00000339600 HDAC1Q13547 482 aaPredicted RBP8.48□□□□□ -1.05
NDUFA4-201ENST00000339600 CCDC26Q8TAB7 109 aa8.48□□□□□ -1.05
NDUFA4-201ENST00000339600 DNAAF4Q8WXU2 420 aa8.48□□□□□ -1.05
NDUFA4-201ENST00000339600 TSPAN18Q96SJ8 248 aa8.48□□□□□ -1.05
NDUFA4-201ENST00000339600 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.48□□□□□ -1.05
NDUFA4-201ENST00000339600 GNL3LQ9NVN8 582 aaKnown RBP8.48□□□□□ -1.05
NDUFA4-201ENST00000339600 ZDHHC9Q9Y397 364 aa8.48□□□□□ -1.05
NDUFA4-201ENST00000339600 ANKRD30BQ9BXX2 1392 aa8.47□□□□□ -1.05
NDUFA4-201ENST00000339600 ZRSR1Q15695 479 aaKnown RBP8.47□□□□□ -1.05
NDUFA4-201ENST00000339600 AP1ARQ63HQ0 302 aa8.47□□□□□ -1.05
NDUFA4-201ENST00000339600 CEP135Q66GS9 1140 aa8.47□□□□□ -1.05
NDUFA4-201ENST00000339600 TEX11Q8IYF3 940 aa8.47□□□□□ -1.05
NDUFA4-201ENST00000339600 IRAK4Q9NWZ3 460 aa8.47□□□□□ -1.05
NDUFA4-201ENST00000339600 ANAPC4Q9UJX5 808 aa8.47□□□□□ -1.05
NDUFA4-201ENST00000339600 COG6Q9Y2V7 657 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 214.5 ms