RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 SSFA2P28290 1259 aa21.57■■□□□ 1.04
LINC01116-202ENST00000339037 PHKG2P15735 406 aa21.56■■□□□ 1.04
LINC01116-202ENST00000339037 IFNL2Q8IZJ0 200 aa21.56■■□□□ 1.04
LINC01116-202ENST00000339037 MAP2P11137 1827 aaKnown RBP21.55■■□□□ 1.04
LINC01116-202ENST00000339037 TNNT2P45379 298 aaPredicted RBP21.55■■□□□ 1.04
LINC01116-202ENST00000339037 SMIM5Q71RC9 77 aa21.55■■□□□ 1.04
LINC01116-202ENST00000339037 LINC00116Q8NCU8 138 aa21.55■■□□□ 1.04
LINC01116-202ENST00000339037 PCGF6Q9BYE7 350 aa21.55■■□□□ 1.04
LINC01116-202ENST00000339037 ASAP1Q9ULH1 1129 aa21.55■■□□□ 1.04
LINC01116-202ENST00000339037 UBR3Q6ZT12 1888 aa21.55■■□□□ 1.04
LINC01116-202ENST00000339037 CLSPNQ9HAW4 1339 aa21.55■■□□□ 1.04
LINC01116-202ENST00000339037 EIF4A2Q14240 407 aaKnown RBP21.54■■□□□ 1.04
LINC01116-202ENST00000339037 PLEKHG2Q9H7P9 1386 aa21.53■■□□□ 1.04
LINC01116-202ENST00000339037 GNPATO15228 680 aa21.52■■□□□ 1.04
LINC01116-202ENST00000339037 ATP6V1AP38606 617 aa21.52■■□□□ 1.04
LINC01116-202ENST00000339037 ITPK1Q13572 414 aa21.52■■□□□ 1.04
LINC01116-202ENST00000339037 ATP10DQ9P241 1426 aa21.51■■□□□ 1.03
LINC01116-202ENST00000339037 ATG3Q9NT62 314 aa21.5■■□□□ 1.03
LINC01116-202ENST00000339037 IGSF1Q8N6C5 1336 aa21.5■■□□□ 1.03
LINC01116-202ENST00000339037 POTEDQ86YR6 584 aa21.48■■□□□ 1.03
LINC01116-202ENST00000339037 EIF4G2P78344 907 aaKnown RBP eCLIP21.47■■□□□ 1.03
LINC01116-202ENST00000339037 WWC3Q9ULE0 1092 aa21.47■■□□□ 1.03
LINC01116-202ENST00000339037 KDRP35968 1356 aa21.47■■□□□ 1.03
LINC01116-202ENST00000339037 HSP90AB1P08238 724 aaKnown RBP21.46■■□□□ 1.03
LINC01116-202ENST00000339037 PANK3Q9H999 370 aa21.46■■□□□ 1.03
LINC01116-202ENST00000339037 ADCY9O60503 1353 aa21.46■■□□□ 1.03
LINC01116-202ENST00000339037 ERVV-2B6SEH9 535 aa21.45■■□□□ 1.02
LINC01116-202ENST00000339037 MMP10P09238 476 aa21.45■■□□□ 1.02
LINC01116-202ENST00000339037 DCAF5Q96JK2 942 aa21.45■■□□□ 1.02
LINC01116-202ENST00000339037 GPBP1L1Q9HC44 474 aaPredicted RBP21.45■■□□□ 1.02
LINC01116-202ENST00000339037 PLEKHO1Q53GL0 409 aaPredicted RBP21.44■■□□□ 1.02
LINC01116-202ENST00000339037 RTCBQ9Y3I0 505 aaKnown RBP21.44■■□□□ 1.02
LINC01116-202ENST00000339037 HSPA5P11021 654 aaKnown RBP21.43■■□□□ 1.02
LINC01116-202ENST00000339037 RBM42Q9BTD8 480 aaKnown RBP21.43■■□□□ 1.02
LINC01116-202ENST00000339037 AMOTQ4VCS5 1084 aa21.42■■□□□ 1.02
LINC01116-202ENST00000339037 TRAPPC3LQ5T215 181 aa21.42■■□□□ 1.02
LINC01116-202ENST00000339037 ZNF530Q6P9A1 599 aaPredicted RBP21.42■■□□□ 1.02
LINC01116-202ENST00000339037 SLC4A9Q96Q91 983 aa21.42■■□□□ 1.02
LINC01116-202ENST00000339037 KDM6AO15550 1401 aaPredicted RBP21.41■■□□□ 1.02
LINC01116-202ENST00000339037 ZNF526Q8TF50 670 aaPredicted RBP21.41■■□□□ 1.02
LINC01116-202ENST00000339037 CABP4P57796 275 aa21.4■■□□□ 1.02
LINC01116-202ENST00000339037 MORC1Q86VD1 984 aa21.4■■□□□ 1.02
LINC01116-202ENST00000339037 NLGN1Q8N2Q7 840 aa21.4■■□□□ 1.02
LINC01116-202ENST00000339037 ZNF831Q5JPB2 1677 aa21.4■■□□□ 1.02
LINC01116-202ENST00000339037 CNTNAP4Q9C0A0 1308 aa21.39■■□□□ 1.01
LINC01116-202ENST00000339037 RC3H1Q5TC82 1133 aaKnown RBP21.39■■□□□ 1.01
LINC01116-202ENST00000339037 PXDNLA1KZ92 1463 aa21.39■■□□□ 1.01
LINC01116-202ENST00000339037 CICQ96RK0 1608 aaPredicted RBP21.38■■□□□ 1.01
LINC01116-202ENST00000339037 C1orf141Q5JVX7 400 aa21.38■■□□□ 1.01
LINC01116-202ENST00000339037 AEBP1Q8IUX7 1158 aa21.38■■□□□ 1.01
LINC01116-202ENST00000339037 MTHFSP49914 203 aa21.37■■□□□ 1.01
LINC01116-202ENST00000339037 ARHGEF1Q92888 912 aaKnown RBP21.37■■□□□ 1.01
LINC01116-202ENST00000339037 RFC4P35249 363 aa21.36■■□□□ 1.01
LINC01116-202ENST00000339037 C10orf71Q711Q0 1435 aa21.36■■□□□ 1.01
LINC01116-202ENST00000339037 COL5A3P25940 1745 aaPredicted RBP21.35■■□□□ 1.01
LINC01116-202ENST00000339037 PTCD1O75127 700 aaKnown RBP21.35■■□□□ 1.01
LINC01116-202ENST00000339037 RPS6KA4O75676 772 aa21.35■■□□□ 1.01
LINC01116-202ENST00000339037 TGFB2P61812 414 aa21.35■■□□□ 1.01
LINC01116-202ENST00000339037 CCER1Q8TC90 406 aaPredicted RBP21.35■■□□□ 1.01
LINC01116-202ENST00000339037 KNSTRNQ9Y448 316 aa21.35■■□□□ 1.01
LINC01116-202ENST00000339037 GYS1P13807 737 aa21.34■■□□□ 1.01
LINC01116-202ENST00000339037 SULT6B1Q6IMI4 303 aa21.34■■□□□ 1.01
LINC01116-202ENST00000339037 KIF13BQ9NQT8 1826 aa21.34■■□□□ 1.01
LINC01116-202ENST00000339037 A0A0G2JLW4 131 aa21.33■■□□□ 1.01
LINC01116-202ENST00000339037 NFATC2IPQ8NCF5 419 aa21.33■■□□□ 1.01
LINC01116-202ENST00000339037 CCDC87Q9NVE4 849 aa21.33■■□□□ 1.01
LINC01116-202ENST00000339037 BCS1LQ9Y276 419 aa21.33■■□□□ 1.01
LINC01116-202ENST00000339037 PARP3Q9Y6F1 533 aa21.32■■□□□ 1
LINC01116-202ENST00000339037 CRKLP46109 303 aaKnown RBP21.31■■□□□ 1
LINC01116-202ENST00000339037 C4AP0C0L4 1744 aa21.31■■□□□ 1
LINC01116-202ENST00000339037 KIAA1551Q9HCM1 1747 aa21.31■■□□□ 1
LINC01116-202ENST00000339037 HSPA6P17066 643 aa21.3■■□□□ 1
LINC01116-202ENST00000339037 IL13P35225 146 aa21.3■■□□□ 1
LINC01116-202ENST00000339037 MYH14Q7Z406 1995 aaKnown RBP21.29■■□□□ 1
LINC01116-202ENST00000339037 DPEP1P16444 411 aa21.29■■□□□ 1
LINC01116-202ENST00000339037 N4BP2Q86UW6 1770 aaPredicted RBP21.28■■□□□ 1
LINC01116-202ENST00000339037 RNF39Q9H2S5 420 aa21.27■■□□□ 1
LINC01116-202ENST00000339037 USP42Q9H9J4 1324 aaKnown RBP21.27■□□□□ 0.99
LINC01116-202ENST00000339037 KIF3CO14782 793 aa21.26■□□□□ 0.99
LINC01116-202ENST00000339037 FCHSD2O94868 740 aa21.26■□□□□ 0.99
LINC01116-202ENST00000339037 AKAP4Q5JQC9 854 aa21.26■□□□□ 0.99
LINC01116-202ENST00000339037 AMER1Q5JTC6 1135 aaPredicted RBP21.26■□□□□ 0.99
LINC01116-202ENST00000339037 ARHGAP27Q6ZUM4 889 aa21.26■□□□□ 0.99
LINC01116-202ENST00000339037 SRP68Q9UHB9 627 aaKnown RBP21.26■□□□□ 0.99
LINC01116-202ENST00000339037 FKBP8Q14318 412 aa21.24■□□□□ 0.99
LINC01116-202ENST00000339037 SLC52A2Q9HAB3 445 aa21.24■□□□□ 0.99
LINC01116-202ENST00000339037 TJP1Q07157 1748 aa21.24■□□□□ 0.99
LINC01116-202ENST00000339037 SCN11AQ9UI33 1791 aa21.23■□□□□ 0.99
LINC01116-202ENST00000339037 DDR1Q08345 913 aa21.23■□□□□ 0.99
LINC01116-202ENST00000339037 KCNA3P22001 575 aa21.22■□□□□ 0.99
LINC01116-202ENST00000339037 INTS5Q6P9B9 1019 aaKnown RBP21.22■□□□□ 0.99
LINC01116-202ENST00000339037 PIM2Q9P1W9 311 aa21.22■□□□□ 0.99
LINC01116-202ENST00000339037 HMOX1P09601 288 aa21.21■□□□□ 0.99
LINC01116-202ENST00000339037 DNAJC10Q8IXB1 793 aa21.21■□□□□ 0.99
LINC01116-202ENST00000339037 ZNF219Q9P2Y4 722 aaPredicted RBP21.21■□□□□ 0.99
LINC01116-202ENST00000339037 BRCA1P38398 1863 aaKnown RBP21.21■□□□□ 0.99
LINC01116-202ENST00000339037 KIF7Q2M1P5 1343 aa21.21■□□□□ 0.99
LINC01116-202ENST00000339037 MRC1P22897 1456 aa21.2■□□□□ 0.98
LINC01116-202ENST00000339037 ZPR1O75312 459 aa21.2■□□□□ 0.98
LINC01116-202ENST00000339037 LGR6Q9HBX8 967 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms