RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 SEC24BO95487 1268 aa12.69□□□□□ -0.38
ARHGEF3-202ENST00000338458 CHPF2Q9P2E5 772 aa12.69□□□□□ -0.38
ARHGEF3-202ENST00000338458 NFATC2IPQ8NCF5 419 aa12.69□□□□□ -0.38
ARHGEF3-202ENST00000338458 INTS3Q68E01 1043 aaKnown RBP12.68□□□□□ -0.38
ARHGEF3-202ENST00000338458 PTPRCP08575 1304 aa12.68□□□□□ -0.38
ARHGEF3-202ENST00000338458 CEMIPQ8WUJ3 1361 aa12.68□□□□□ -0.38
ARHGEF3-202ENST00000338458 EVA1CP58658 441 aa12.68□□□□□ -0.38
ARHGEF3-202ENST00000338458 RGS12O14924 1447 aa12.68□□□□□ -0.38
ARHGEF3-202ENST00000338458 SMC5Q8IY18 1101 aa12.68□□□□□ -0.38
ARHGEF3-202ENST00000338458 CHMP4BQ9H444 224 aaKnown RBP12.68□□□□□ -0.38
ARHGEF3-202ENST00000338458 SLC4A3P48751 1232 aa12.67□□□□□ -0.38
ARHGEF3-202ENST00000338458 IPO9Q96P70 1041 aaKnown RBP12.67□□□□□ -0.38
ARHGEF3-202ENST00000338458 SPG7Q9UQ90 795 aa12.67□□□□□ -0.38
ARHGEF3-202ENST00000338458 SOS2Q07890 1332 aaPredicted RBP12.67□□□□□ -0.38
ARHGEF3-202ENST00000338458 PIP4K2AP48426 406 aaPredicted RBP12.67□□□□□ -0.38
ARHGEF3-202ENST00000338458 DDX54Q8TDD1 881 aaKnown RBP12.67□□□□□ -0.38
ARHGEF3-202ENST00000338458 MEGF6O75095 1541 aa12.66□□□□□ -0.38
ARHGEF3-202ENST00000338458 ZBTB47Q9UFB7 747 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF3-202ENST00000338458 AIMP1Q12904 312 aaKnown RBP12.66□□□□□ -0.38
ARHGEF3-202ENST00000338458 CHD1LQ86WJ1 897 aa12.66□□□□□ -0.38
ARHGEF3-202ENST00000338458 CYP27B1O15528 508 aa12.66□□□□□ -0.38
ARHGEF3-202ENST00000338458 PHKG2P15735 406 aa12.66□□□□□ -0.38
ARHGEF3-202ENST00000338458 PROSER3Q2NL68 480 aa12.65□□□□□ -0.38
ARHGEF3-202ENST00000338458 LARP1Q6PKG0 1096 aaKnown RBP12.65□□□□□ -0.38
ARHGEF3-202ENST00000338458 IFNL2Q8IZJ0 200 aa12.65□□□□□ -0.38
ARHGEF3-202ENST00000338458 SMARCA5O60264 1052 aaPredicted RBP12.64□□□□□ -0.39
ARHGEF3-202ENST00000338458 NUCB1Q02818 461 aa12.64□□□□□ -0.39
ARHGEF3-202ENST00000338458 NOP58Q9Y2X3 529 aaKnown RBP12.64□□□□□ -0.39
ARHGEF3-202ENST00000338458 PHRF1Q9P1Y6 1649 aaKnown RBP12.64□□□□□ -0.39
ARHGEF3-202ENST00000338458 PI4KAP2A4QPH2 592 aa12.64□□□□□ -0.39
ARHGEF3-202ENST00000338458 PIP4K2BP78356 416 aa12.64□□□□□ -0.39
ARHGEF3-202ENST00000338458 PI4KAP1Q8N8J0 262 aa12.64□□□□□ -0.39
ARHGEF3-202ENST00000338458 MYL6BP14649 208 aa12.63□□□□□ -0.39
ARHGEF3-202ENST00000338458 CCT4P50991 539 aaKnown RBP12.63□□□□□ -0.39
ARHGEF3-202ENST00000338458 CEP85Q6P2H3 762 aa12.63□□□□□ -0.39
ARHGEF3-202ENST00000338458 C16orf71Q8IYS4 520 aaPredicted RBP12.63□□□□□ -0.39
ARHGEF3-202ENST00000338458 LRRC37A3O60309 1634 aa12.63□□□□□ -0.39
ARHGEF3-202ENST00000338458 GIGYF1O75420 1035 aaPredicted RBP12.63□□□□□ -0.39
ARHGEF3-202ENST00000338458 BABAM1Q9NWV8 329 aa12.63□□□□□ -0.39
ARHGEF3-202ENST00000338458 SLC52A2Q9HAB3 445 aa12.62□□□□□ -0.39
ARHGEF3-202ENST00000338458 ZNF790Q6PG37 636 aa12.62□□□□□ -0.39
ARHGEF3-202ENST00000338458 GCC1Q96CN9 775 aa12.62□□□□□ -0.39
ARHGEF3-202ENST00000338458 BTG4Q9NY30 223 aa12.62□□□□□ -0.39
ARHGEF3-202ENST00000338458 KAT6BQ8WYB5 2073 aa12.62□□□□□ -0.39
ARHGEF3-202ENST00000338458 CABP4P57796 275 aa12.62□□□□□ -0.39
ARHGEF3-202ENST00000338458 ANKRD44Q8N8A2 993 aa12.62□□□□□ -0.39
ARHGEF3-202ENST00000338458 CAMTA1Q9Y6Y1 1673 aa12.62□□□□□ -0.39
ARHGEF3-202ENST00000338458 WDR17Q8IZU2 1322 aa12.61□□□□□ -0.39
ARHGEF3-202ENST00000338458 MFAP1P55081 439 aaKnown RBP12.61□□□□□ -0.39
ARHGEF3-202ENST00000338458 ZNF496Q96IT1 587 aaPredicted RBP12.61□□□□□ -0.39
ARHGEF3-202ENST00000338458 EXOC6BQ9Y2D4 811 aa12.61□□□□□ -0.39
ARHGEF3-202ENST00000338458 LRRFIP2Q9Y608 721 aaKnown RBP12.61□□□□□ -0.39
ARHGEF3-202ENST00000338458 ADAMTS2O95450 1211 aa12.61□□□□□ -0.39
ARHGEF3-202ENST00000338458 TTC5Q8N0Z6 440 aa12.61□□□□□ -0.39
ARHGEF3-202ENST00000338458 KDM6AO15550 1401 aaPredicted RBP12.61□□□□□ -0.39
ARHGEF3-202ENST00000338458 OTUD7AQ8TE49 926 aaPredicted RBP12.61□□□□□ -0.39
ARHGEF3-202ENST00000338458 A0A0G2JS52 829 aa12.6□□□□□ -0.39
ARHGEF3-202ENST00000338458 GNAI2P04899 355 aa12.6□□□□□ -0.39
ARHGEF3-202ENST00000338458 ZCRB1Q8TBF4 217 aaKnown RBP12.6□□□□□ -0.39
ARHGEF3-202ENST00000338458 NCAPD2Q15021 1401 aa12.6□□□□□ -0.39
ARHGEF3-202ENST00000338458 COL18A1P39060 1754 aa12.6□□□□□ -0.39
ARHGEF3-202ENST00000338458 CPDO75976 1380 aa12.6□□□□□ -0.39
ARHGEF3-202ENST00000338458 NUTM2BA6NNL0 878 aaPredicted RBP12.6□□□□□ -0.39
ARHGEF3-202ENST00000338458 NUTM2EB1AL46 878 aaPredicted RBP12.6□□□□□ -0.39
ARHGEF3-202ENST00000338458 NUTM2AQ8IVF1 878 aaPredicted RBP12.6□□□□□ -0.39
ARHGEF3-202ENST00000338458 RPAP2Q8IXW5 612 aaPredicted RBP12.6□□□□□ -0.39
ARHGEF3-202ENST00000338458 SRCIN1Q9C0H9 1055 aa12.6□□□□□ -0.39
ARHGEF3-202ENST00000338458 DBF4Q9UBU7 674 aaPredicted RBP12.6□□□□□ -0.39
ARHGEF3-202ENST00000338458 LMO7Q8WWI1 1683 aa12.59□□□□□ -0.39
ARHGEF3-202ENST00000338458 PNMA6EA0A0J9YXQ4 647 aa12.59□□□□□ -0.39
ARHGEF3-202ENST00000338458 PTCD1O75127 700 aaKnown RBP12.59□□□□□ -0.39
ARHGEF3-202ENST00000338458 UBTFL1P0CB47 393 aaPredicted RBP12.59□□□□□ -0.39
ARHGEF3-202ENST00000338458 DNAAF4Q8WXU2 420 aa12.59□□□□□ -0.39
ARHGEF3-202ENST00000338458 DCAF5Q96JK2 942 aa12.59□□□□□ -0.39
ARHGEF3-202ENST00000338458 USP44Q9H0E7 712 aa12.59□□□□□ -0.39
ARHGEF3-202ENST00000338458 DCTPP1Q9H773 170 aa12.59□□□□□ -0.39
ARHGEF3-202ENST00000338458 MAP3K2Q9Y2U5 619 aa12.59□□□□□ -0.39
ARHGEF3-202ENST00000338458 USP16Q9Y5T5 823 aa12.59□□□□□ -0.39
ARHGEF3-202ENST00000338458 ATP10DQ9P241 1426 aa12.58□□□□□ -0.39
ARHGEF3-202ENST00000338458 DAXXQ9UER7 740 aaPredicted RBP12.58□□□□□ -0.39
ARHGEF3-202ENST00000338458 NBPF7P0C2Y1 421 aaPredicted RBP12.58□□□□□ -0.4
ARHGEF3-202ENST00000338458 IL2RBP14784 551 aa12.58□□□□□ -0.4
ARHGEF3-202ENST00000338458 CWF19L2Q2TBE0 894 aaKnown RBP12.58□□□□□ -0.4
ARHGEF3-202ENST00000338458 GNAI3P08754 354 aa12.57□□□□□ -0.4
ARHGEF3-202ENST00000338458 NBR1Q14596 966 aa12.57□□□□□ -0.4
ARHGEF3-202ENST00000338458 FAM208AQ9UK61 1670 aaKnown RBP12.57□□□□□ -0.4
ARHGEF3-202ENST00000338458 VIRMAQ69YN4 1812 aaKnown RBP12.57□□□□□ -0.4
ARHGEF3-202ENST00000338458 ANP32EQ9BTT0 268 aa12.57□□□□□ -0.4
ARHGEF3-202ENST00000338458 UPF2Q9HAU5 1272 aaKnown RBP12.57□□□□□ -0.4
ARHGEF3-202ENST00000338458 HMMRO75330 724 aa12.57□□□□□ -0.4
ARHGEF3-202ENST00000338458 TSHZ3Q63HK5 1081 aa12.57□□□□□ -0.4
ARHGEF3-202ENST00000338458 COL5A2P05997 1499 aaPredicted RBP12.57□□□□□ -0.4
ARHGEF3-202ENST00000338458 JARID2Q92833 1246 aaPredicted RBP12.56□□□□□ -0.4
ARHGEF3-202ENST00000338458 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.56□□□□□ -0.4
ARHGEF3-202ENST00000338458 ZNF330Q9Y3S2 320 aaPredicted RBP12.56□□□□□ -0.4
ARHGEF3-202ENST00000338458 HOXB7P09629 217 aa12.56□□□□□ -0.4
ARHGEF3-202ENST00000338458 SOS1Q07889 1333 aaPredicted RBP12.55□□□□□ -0.4
ARHGEF3-202ENST00000338458 RIC3Q7Z5B4 369 aa12.55□□□□□ -0.4
ARHGEF3-202ENST00000338458 C9orf78Q9NZ63 289 aaPredicted RBP12.55□□□□□ -0.4
ARHGEF3-202ENST00000338458 BEND3Q5T5X7 828 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms