RNA–Protein interactions for RNA: ENST00000337004.8

PTDSS1-201, Transcript of phosphatidylserine synthase 1, humanhuman

TSL 1 (best)

Gene PTDSS1, Length 2,366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS1-201ENST00000337004 NLRP6P59044 892 aa26.31■■□□□ 1.8
PTDSS1-201ENST00000337004 CEP170BQ9Y4F5 1589 aaPredicted RBP26.3■■□□□ 1.8
PTDSS1-201ENST00000337004 MX1P20591 662 aa26.29■■□□□ 1.8
PTDSS1-201ENST00000337004 ZGPATQ8N5A5 531 aaKnown RBP26.29■■□□□ 1.8
PTDSS1-201ENST00000337004 BABAM1Q9NWV8 329 aa26.29■■□□□ 1.8
PTDSS1-201ENST00000337004 SALL3Q9BXA9 1300 aa26.29■■□□□ 1.8
PTDSS1-201ENST00000337004 ANP32BQ92688 251 aaKnown RBP26.28■■□□□ 1.8
PTDSS1-201ENST00000337004 LMBRD1Q9NUN5 540 aa26.28■■□□□ 1.8
PTDSS1-201ENST00000337004 MCCP23508 829 aa26.28■■□□□ 1.8
PTDSS1-201ENST00000337004 MCM2P49736 904 aa26.28■■□□□ 1.8
PTDSS1-201ENST00000337004 PKP1Q13835 747 aa26.28■■□□□ 1.8
PTDSS1-201ENST00000337004 NASPP49321 788 aaPredicted RBP26.27■■□□□ 1.8
PTDSS1-201ENST00000337004 ESYT1Q9BSJ8 1104 aa26.27■■□□□ 1.8
PTDSS1-201ENST00000337004 SRCIN1Q9C0H9 1055 aa26.27■■□□□ 1.8
PTDSS1-201ENST00000337004 CEBPAP49715 358 aaPredicted RBP26.27■■□□□ 1.8
PTDSS1-201ENST00000337004 PNMA6EA0A0J9YXQ4 647 aa26.26■■□□□ 1.79
PTDSS1-201ENST00000337004 NCLP19338 710 aaKnown RBP26.26■■□□□ 1.79
PTDSS1-201ENST00000337004 NEK4P51957 841 aa26.26■■□□□ 1.79
PTDSS1-201ENST00000337004 ZNF445P59923 1031 aa26.26■■□□□ 1.79
PTDSS1-201ENST00000337004 CCDC173Q0VFZ6 552 aa26.26■■□□□ 1.79
PTDSS1-201ENST00000337004 HOXC9P31274 260 aa26.26■■□□□ 1.79
PTDSS1-201ENST00000337004 TAF7Q15545 349 aaPredicted RBP26.26■■□□□ 1.79
PTDSS1-201ENST00000337004 NECTIN2Q92692 538 aa26.25■■□□□ 1.79
PTDSS1-201ENST00000337004 FMN2Q9NZ56 1722 aa26.25■■□□□ 1.79
PTDSS1-201ENST00000337004 TSHZ3Q63HK5 1081 aa26.25■■□□□ 1.79
PTDSS1-201ENST00000337004 STAP2Q9UGK3 403 aa26.24■■□□□ 1.79
PTDSS1-201ENST00000337004 RIMS1Q86UR5 1692 aaKnown RBP26.24■■□□□ 1.79
PTDSS1-201ENST00000337004 TRIM6-TRIM34B2RNG4 842 aa26.24■■□□□ 1.79
PTDSS1-201ENST00000337004 CAVIN1Q6NZI2 390 aaKnown RBP26.24■■□□□ 1.79
PTDSS1-201ENST00000337004 IL17REQ8NFR9 667 aa26.24■■□□□ 1.79
PTDSS1-201ENST00000337004 MAP3K5Q99683 1374 aa26.23■■□□□ 1.79
PTDSS1-201ENST00000337004 ANAPC15P60006 121 aa26.23■■□□□ 1.79
PTDSS1-201ENST00000337004 LRRFIP2Q9Y608 721 aaKnown RBP26.23■■□□□ 1.79
PTDSS1-201ENST00000337004 DIP2AQ14689 1571 aa26.23■■□□□ 1.79
PTDSS1-201ENST00000337004 RILPL2Q969X0 211 aa26.22■■□□□ 1.79
PTDSS1-201ENST00000337004 ZDHHC9Q9Y397 364 aa26.22■■□□□ 1.79
PTDSS1-201ENST00000337004 CHMLP26374 656 aa26.22■■□□□ 1.79
PTDSS1-201ENST00000337004 TMX3Q96JJ7 454 aa26.22■■□□□ 1.79
PTDSS1-201ENST00000337004 PPP1R9BQ96SB3 815 aa26.22■■□□□ 1.79
PTDSS1-201ENST00000337004 PRPF40AO75400 957 aaKnown RBP26.21■■□□□ 1.79
PTDSS1-201ENST00000337004 UBTFL1P0CB47 393 aaPredicted RBP26.21■■□□□ 1.79
PTDSS1-201ENST00000337004 ZSCAN23Q3MJ62 389 aa26.21■■□□□ 1.79
PTDSS1-201ENST00000337004 SLIT1O75093 1534 aa26.21■■□□□ 1.79
PTDSS1-201ENST00000337004 ARHGAP23Q9P227 1491 aa26.2■■□□□ 1.79
PTDSS1-201ENST00000337004 NAP1L5Q96NT1 182 aaPredicted RBP26.2■■□□□ 1.79
PTDSS1-201ENST00000337004 USP44Q9H0E7 712 aa26.2■■□□□ 1.79
PTDSS1-201ENST00000337004 ANO2Q9NQ90 1003 aa26.2■■□□□ 1.78
PTDSS1-201ENST00000337004 ERBB4Q15303 1308 aa26.2■■□□□ 1.78
PTDSS1-201ENST00000337004 ANKARQ7Z5J8 1434 aa26.19■■□□□ 1.78
PTDSS1-201ENST00000337004 THEMISQ8N1K5 641 aaPredicted RBP26.19■■□□□ 1.78
PTDSS1-201ENST00000337004 AOX1Q06278 1338 aa26.19■■□□□ 1.78
PTDSS1-201ENST00000337004 NUTM2GQ5VZR2 741 aa26.19■■□□□ 1.78
PTDSS1-201ENST00000337004 LRRC37A3O60309 1634 aa26.18■■□□□ 1.78
PTDSS1-201ENST00000337004 ABTB2Q8N961 1025 aa26.18■■□□□ 1.78
PTDSS1-201ENST00000337004 PIK3C2AO00443 1686 aa26.18■■□□□ 1.78
PTDSS1-201ENST00000337004 KIF13AQ9H1H9 1805 aa26.18■■□□□ 1.78
PTDSS1-201ENST00000337004 PXDNLA1KZ92 1463 aa26.18■■□□□ 1.78
PTDSS1-201ENST00000337004 HDGFL1Q5TGJ6 251 aa26.18■■□□□ 1.78
PTDSS1-201ENST00000337004 LTV1Q96GA3 475 aaPredicted RBP26.18■■□□□ 1.78
PTDSS1-201ENST00000337004 RAB11FIP3O75154 756 aa26.16■■□□□ 1.78
PTDSS1-201ENST00000337004 CUL4AQ13619 759 aa26.16■■□□□ 1.78
PTDSS1-201ENST00000337004 SSH3Q8TE77 659 aa26.16■■□□□ 1.78
PTDSS1-201ENST00000337004 EPB41L2O43491 1005 aaKnown RBP26.15■■□□□ 1.78
PTDSS1-201ENST00000337004 INTS4Q96HW7 963 aaKnown RBP26.15■■□□□ 1.78
PTDSS1-201ENST00000337004 GPT2Q8TD30 523 aa26.14■■□□□ 1.78
PTDSS1-201ENST00000337004 IL17RAQ96F46 866 aa26.14■■□□□ 1.78
PTDSS1-201ENST00000337004 PALD1Q9ULE6 856 aa26.14■■□□□ 1.78
PTDSS1-201ENST00000337004 XRN1Q8IZH2 1706 aaKnown RBP26.13■■□□□ 1.77
PTDSS1-201ENST00000337004 FAM208AQ9UK61 1670 aaKnown RBP26.13■■□□□ 1.77
PTDSS1-201ENST00000337004 CHMP4AQ9BY43 222 aa26.13■■□□□ 1.77
PTDSS1-201ENST00000337004 NWD1Q149M9 1564 aa26.13■■□□□ 1.77
PTDSS1-201ENST00000337004 PHAXQ9H814 394 aaKnown RBP26.12■■□□□ 1.77
PTDSS1-201ENST00000337004 BRD1O95696 1058 aa26.12■■□□□ 1.77
PTDSS1-201ENST00000337004 PLPPR3Q6T4P5 718 aa26.12■■□□□ 1.77
PTDSS1-201ENST00000337004 UNC5CLQ8IV45 518 aa26.12■■□□□ 1.77
PTDSS1-201ENST00000337004 IL1RAPL2Q9NP60 686 aa26.12■■□□□ 1.77
PTDSS1-201ENST00000337004 SURF6O75683 361 aaKnown RBP26.11■■□□□ 1.77
PTDSS1-201ENST00000337004 PPP1R42Q7Z4L9 355 aa26.11■■□□□ 1.77
PTDSS1-201ENST00000337004 AK9Q5TCS8 1911 aa26.11■■□□□ 1.77
PTDSS1-201ENST00000337004 MBD3O95983 291 aa26.1■■□□□ 1.77
PTDSS1-201ENST00000337004 KCNA6P17658 529 aa26.1■■□□□ 1.77
PTDSS1-201ENST00000337004 POLA2Q14181 598 aa26.1■■□□□ 1.77
PTDSS1-201ENST00000337004 PRIM1P49642 420 aaKnown RBP26.09■■□□□ 1.77
PTDSS1-201ENST00000337004 C14orf37Q86TY3 774 aa26.09■■□□□ 1.77
PTDSS1-201ENST00000337004 FOXD4L5Q5VV16 416 aaPredicted RBP26.09■■□□□ 1.77
PTDSS1-201ENST00000337004 ZSCAN30Q86W11 494 aa26.09■■□□□ 1.77
PTDSS1-201ENST00000337004 NUTM1Q86Y26 1132 aa26.09■■□□□ 1.77
PTDSS1-201ENST00000337004 USHBP1Q8N6Y0 703 aa26.09■■□□□ 1.77
PTDSS1-201ENST00000337004 FOXD4L4Q8WXT5 416 aaPredicted RBP26.09■■□□□ 1.77
PTDSS1-201ENST00000337004 RBSNQ9H1K0 784 aa26.09■■□□□ 1.77
PTDSS1-201ENST00000337004 RHPN1Q8TCX5 695 aa26.08■■□□□ 1.77
PTDSS1-201ENST00000337004 RBM27Q9P2N5 1060 aaKnown RBP26.08■■□□□ 1.77
PTDSS1-201ENST00000337004 RGPD8O14715 1765 aaPredicted RBP26.08■■□□□ 1.77
PTDSS1-201ENST00000337004 HOXB7P09629 217 aa26.07■■□□□ 1.76
PTDSS1-201ENST00000337004 EIF2S2P20042 333 aaKnown RBP26.07■■□□□ 1.76
PTDSS1-201ENST00000337004 CEMIPQ8WUJ3 1361 aa26.07■■□□□ 1.76
PTDSS1-201ENST00000337004 HSPA4P34932 840 aa26.07■■□□□ 1.76
PTDSS1-201ENST00000337004 KIF1BPQ96EK5 621 aa26.07■■□□□ 1.76
PTDSS1-201ENST00000337004 SRGAP3O43295 1099 aa26.06■■□□□ 1.76
PTDSS1-201ENST00000337004 NOL8Q76FK4 1167 aaKnown RBP26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms