RNA–Protein interactions for RNA: ENST00000336625.12

HFE-203, Transcript of homeostatic iron regulator, humanhuman

TSL 1 (best) BASIC

Gene HFE, Length 804 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFE-203ENST00000336625 TAF1LQ8IZX4 1826 aa18.81■□□□□ 0.6
HFE-203ENST00000336625 ATG3Q9NT62 314 aa18.79■□□□□ 0.6
HFE-203ENST00000336625 EIF4A2Q14240 407 aaKnown RBP18.78■□□□□ 0.6
HFE-203ENST00000336625 ITGB4P16144 1822 aa18.78■□□□□ 0.6
HFE-203ENST00000336625 ITPK1Q13572 414 aa18.77■□□□□ 0.6
HFE-203ENST00000336625 ADCY9O60503 1353 aa18.77■□□□□ 0.6
HFE-203ENST00000336625 MMP10P09238 476 aa18.76■□□□□ 0.59
HFE-203ENST00000336625 AMIGO3Q86WK7 504 aa18.76■□□□□ 0.59
HFE-203ENST00000336625 HSPA6P17066 643 aa18.75■□□□□ 0.59
HFE-203ENST00000336625 RFC4P35249 363 aa18.75■□□□□ 0.59
HFE-203ENST00000336625 CCDC87Q9NVE4 849 aa18.75■□□□□ 0.59
HFE-203ENST00000336625 UBR3Q6ZT12 1888 aa18.75■□□□□ 0.59
HFE-203ENST00000336625 ANKRD26Q9UPS8 1709 aa18.74■□□□□ 0.59
HFE-203ENST00000336625 RPS6KA4O75676 772 aa18.74■□□□□ 0.59
HFE-203ENST00000336625 CABP4P57796 275 aa18.74■□□□□ 0.59
HFE-203ENST00000336625 EIF4G2P78344 907 aaKnown RBP eCLIP18.74■□□□□ 0.59
HFE-203ENST00000336625 RBM42Q9BTD8 480 aaKnown RBP18.74■□□□□ 0.59
HFE-203ENST00000336625 MAP2P11137 1827 aaKnown RBP18.74■□□□□ 0.59
HFE-203ENST00000336625 CNTNAP4Q9C0A0 1308 aa18.74■□□□□ 0.59
HFE-203ENST00000336625 TNNT2P45379 298 aaPredicted RBP18.73■□□□□ 0.59
HFE-203ENST00000336625 C1orf141Q5JVX7 400 aa18.73■□□□□ 0.59
HFE-203ENST00000336625 POLR3GLQ9BT43 218 aa18.73■□□□□ 0.59
HFE-203ENST00000336625 PARP3Q9Y6F1 533 aa18.73■□□□□ 0.59
HFE-203ENST00000336625 TOGARAM1Q9Y4F4 1720 aa18.73■□□□□ 0.59
HFE-203ENST00000336625 MTHFSP49914 203 aa18.72■□□□□ 0.59
HFE-203ENST00000336625 IFFO2Q5TF58 517 aa18.72■□□□□ 0.59
HFE-203ENST00000336625 ZNF530Q6P9A1 599 aaPredicted RBP18.71■□□□□ 0.59
HFE-203ENST00000336625 ARHGEF1Q92888 912 aaKnown RBP18.71■□□□□ 0.59
HFE-203ENST00000336625 KDRP35968 1356 aa18.7■□□□□ 0.58
HFE-203ENST00000336625 ZNF526Q8TF50 670 aaPredicted RBP18.7■□□□□ 0.58
HFE-203ENST00000336625 PANK3Q9H999 370 aa18.7■□□□□ 0.58
HFE-203ENST00000336625 SMIM5Q71RC9 77 aa18.69■□□□□ 0.58
HFE-203ENST00000336625 MORC1Q86VD1 984 aa18.69■□□□□ 0.58
HFE-203ENST00000336625 BCS1LQ9Y276 419 aa18.69■□□□□ 0.58
HFE-203ENST00000336625 ZNF831Q5JPB2 1677 aa18.69■□□□□ 0.58
HFE-203ENST00000336625 GYS1P13807 737 aa18.68■□□□□ 0.58
HFE-203ENST00000336625 TOMM70O94826 608 aa18.67■□□□□ 0.58
HFE-203ENST00000336625 SLC4A9Q96Q91 983 aa18.67■□□□□ 0.58
HFE-203ENST00000336625 KNSTRNQ9Y448 316 aa18.67■□□□□ 0.58
HFE-203ENST00000336625 APLP1P51693 650 aa18.66■□□□□ 0.58
HFE-203ENST00000336625 ARHGAP27Q6ZUM4 889 aa18.66■□□□□ 0.58
HFE-203ENST00000336625 PIM2Q9P1W9 311 aa18.66■□□□□ 0.58
HFE-203ENST00000336625 PXDNLA1KZ92 1463 aa18.65■□□□□ 0.58
HFE-203ENST00000336625 A0A0G2JLW4 131 aa18.65■□□□□ 0.58
HFE-203ENST00000336625 KIF3CO14782 793 aa18.65■□□□□ 0.58
HFE-203ENST00000336625 FCHSD2O94868 740 aa18.65■□□□□ 0.58
HFE-203ENST00000336625 NFATC2IPQ8NCF5 419 aa18.65■□□□□ 0.58
HFE-203ENST00000336625 C10orf71Q711Q0 1435 aa18.65■□□□□ 0.58
HFE-203ENST00000336625 WWC3Q9ULE0 1092 aa18.64■□□□□ 0.57
HFE-203ENST00000336625 CICQ96RK0 1608 aaPredicted RBP18.63■□□□□ 0.57
HFE-203ENST00000336625 PTCD1O75127 700 aaKnown RBP18.63■□□□□ 0.57
HFE-203ENST00000336625 DPEP1P16444 411 aa18.63■□□□□ 0.57
HFE-203ENST00000336625 CRKLP46109 303 aaKnown RBP18.63■□□□□ 0.57
HFE-203ENST00000336625 HSPA5P11021 654 aaKnown RBP18.62■□□□□ 0.57
HFE-203ENST00000336625 DALRD3Q5D0E6 543 aaKnown RBP18.62■□□□□ 0.57
HFE-203ENST00000336625 AKAP4Q5JQC9 854 aa18.62■□□□□ 0.57
HFE-203ENST00000336625 SULT6B1Q6IMI4 303 aa18.62■□□□□ 0.57
HFE-203ENST00000336625 ZPR1O75312 459 aa18.61■□□□□ 0.57
HFE-203ENST00000336625 PCGF6Q9BYE7 350 aa18.61■□□□□ 0.57
HFE-203ENST00000336625 KIF13BQ9NQT8 1826 aa18.6■□□□□ 0.57
HFE-203ENST00000336625 KDM6AO15550 1401 aaPredicted RBP18.6■□□□□ 0.57
HFE-203ENST00000336625 USP42Q9H9J4 1324 aaKnown RBP18.6■□□□□ 0.57
HFE-203ENST00000336625 C16orf71Q8IYS4 520 aaPredicted RBP18.6■□□□□ 0.57
HFE-203ENST00000336625 KDM2BQ8NHM5 1336 aa18.59■□□□□ 0.57
HFE-203ENST00000336625 IL13P35225 146 aa18.59■□□□□ 0.57
HFE-203ENST00000336625 KCNA3P22001 575 aa18.58■□□□□ 0.56
HFE-203ENST00000336625 RBM46Q8TBY0 533 aaKnown RBP18.58■□□□□ 0.56
HFE-203ENST00000336625 SLC52A2Q9HAB3 445 aa18.58■□□□□ 0.56
HFE-203ENST00000336625 AEBP1Q8IUX7 1158 aa18.57■□□□□ 0.56
HFE-203ENST00000336625 VSIG10Q8N0Z9 540 aa18.57■□□□□ 0.56
HFE-203ENST00000336625 C4AP0C0L4 1744 aa18.57■□□□□ 0.56
HFE-203ENST00000336625 ZC3H4Q9UPT8 1303 aaKnown RBP18.56■□□□□ 0.56
HFE-203ENST00000336625 TM4SF1P30408 202 aa18.56■□□□□ 0.56
HFE-203ENST00000336625 FSTL1Q12841 308 aa18.56■□□□□ 0.56
HFE-203ENST00000336625 FKBP8Q14318 412 aa18.56■□□□□ 0.56
HFE-203ENST00000336625 C9orf131Q5VYM1 1079 aa18.56■□□□□ 0.56
HFE-203ENST00000336625 INTS5Q6P9B9 1019 aaKnown RBP18.55■□□□□ 0.56
HFE-203ENST00000336625 NARFQ9UHQ1 456 aa18.54■□□□□ 0.56
HFE-203ENST00000336625 PDZRN3Q9UPQ7 1066 aa18.54■□□□□ 0.56
HFE-203ENST00000336625 COL5A3P25940 1745 aaPredicted RBP18.54■□□□□ 0.56
HFE-203ENST00000336625 POLRMTO00411 1230 aaKnown RBP18.53■□□□□ 0.56
HFE-203ENST00000336625 SRP68Q9UHB9 627 aaKnown RBP18.53■□□□□ 0.56
HFE-203ENST00000336625 RNMTO43148 476 aaKnown RBP18.52■□□□□ 0.56
HFE-203ENST00000336625 MYH14Q7Z406 1995 aaKnown RBP18.51■□□□□ 0.55
HFE-203ENST00000336625 SOS1Q07889 1333 aaPredicted RBP18.51■□□□□ 0.55
HFE-203ENST00000336625 A0A087WZG4 1122 aa18.51■□□□□ 0.55
HFE-203ENST00000336625 STARD3NLO95772 234 aa18.51■□□□□ 0.55
HFE-203ENST00000336625 CYP19A1P11511 503 aaPredicted RBP18.51■□□□□ 0.55
HFE-203ENST00000336625 DDR1Q08345 913 aa18.51■□□□□ 0.55
HFE-203ENST00000336625 AMER1Q5JTC6 1135 aaPredicted RBP18.51■□□□□ 0.55
HFE-203ENST00000336625 DNAJC10Q8IXB1 793 aa18.51■□□□□ 0.55
HFE-203ENST00000336625 TEX13AQ9BXU3 409 aaPredicted RBP18.51■□□□□ 0.55
HFE-203ENST00000336625 NMRK2Q9NPI5 230 aa18.51■□□□□ 0.55
HFE-203ENST00000336625 RNF181Q9P0P0 153 aa18.51■□□□□ 0.55
HFE-203ENST00000336625 N4BP2Q86UW6 1770 aaPredicted RBP18.5■□□□□ 0.55
HFE-203ENST00000336625 DIAPH1O60610 1272 aaKnown RBP18.5■□□□□ 0.55
HFE-203ENST00000336625 USPL1Q5W0Q7 1092 aa18.5■□□□□ 0.55
HFE-203ENST00000336625 DNAJC5GQ8N7S2 189 aa18.5■□□□□ 0.55
HFE-203ENST00000336625 KIAA1551Q9HCM1 1747 aa18.49■□□□□ 0.55
HFE-203ENST00000336625 TTC5Q8N0Z6 440 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms