RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 USP26Q9BXU7 913 aa21.83■■□□□ 1.09
LRCH3-201ENST00000334859 SOS1Q07889 1333 aaPredicted RBP21.83■■□□□ 1.09
LRCH3-201ENST00000334859 ESCO1Q5FWF5 840 aa21.82■■□□□ 1.08
LRCH3-201ENST00000334859 HDGFL1Q5TGJ6 251 aa21.82■■□□□ 1.08
LRCH3-201ENST00000334859 PDE1AP54750 535 aa21.82■■□□□ 1.08
LRCH3-201ENST00000334859 PSME1Q06323 249 aa21.82■■□□□ 1.08
LRCH3-201ENST00000334859 RAB3GAP1Q15042 981 aa21.82■■□□□ 1.08
LRCH3-201ENST00000334859 IP6K1Q92551 441 aa21.82■■□□□ 1.08
LRCH3-201ENST00000334859 GBP4Q96PP9 640 aa21.82■■□□□ 1.08
LRCH3-201ENST00000334859 BABAM1Q9NWV8 329 aa21.82■■□□□ 1.08
LRCH3-201ENST00000334859 CACNA1FO60840 1977 aa21.82■■□□□ 1.08
LRCH3-201ENST00000334859 NFAT5O94916 1531 aa21.82■■□□□ 1.08
LRCH3-201ENST00000334859 SETD1BQ9UPS6 1966 aaKnown RBP21.81■■□□□ 1.08
LRCH3-201ENST00000334859 PNMA6EA0A0J9YXQ4 647 aa21.8■■□□□ 1.08
LRCH3-201ENST00000334859 REC8O95072 547 aa21.8■■□□□ 1.08
LRCH3-201ENST00000334859 LRRCC1Q9C099 1032 aa21.8■■□□□ 1.08
LRCH3-201ENST00000334859 GOLGA6L3A6NEY3 463 aa21.8■■□□□ 1.08
LRCH3-201ENST00000334859 NBPF6Q5VWK0 638 aa21.8■■□□□ 1.08
LRCH3-201ENST00000334859 TSHZ3Q63HK5 1081 aa21.8■■□□□ 1.08
LRCH3-201ENST00000334859 NBPF4Q96M43 638 aa21.8■■□□□ 1.08
LRCH3-201ENST00000334859 LRRFIP2Q9Y608 721 aaKnown RBP21.8■■□□□ 1.08
LRCH3-201ENST00000334859 OSBPL3Q9H4L5 887 aa21.79■■□□□ 1.08
LRCH3-201ENST00000334859 ADGRL3Q9HAR2 1447 aa21.79■■□□□ 1.08
LRCH3-201ENST00000334859 PXDNLA1KZ92 1463 aa21.79■■□□□ 1.08
LRCH3-201ENST00000334859 PLEKHG5O94827 1062 aa21.78■■□□□ 1.08
LRCH3-201ENST00000334859 N4BP2Q86UW6 1770 aaPredicted RBP21.78■■□□□ 1.08
LRCH3-201ENST00000334859 ERC2O15083 957 aa21.78■■□□□ 1.08
LRCH3-201ENST00000334859 CEMIPQ8WUJ3 1361 aa21.77■■□□□ 1.08
LRCH3-201ENST00000334859 UBTFL1P0CB47 393 aaPredicted RBP21.77■■□□□ 1.08
LRCH3-201ENST00000334859 ATP8B2P98198 1209 aa21.77■■□□□ 1.08
LRCH3-201ENST00000334859 PHAXQ9H814 394 aaKnown RBP21.77■■□□□ 1.08
LRCH3-201ENST00000334859 EIF2S2P20042 333 aaKnown RBP21.76■■□□□ 1.07
LRCH3-201ENST00000334859 MX1P20591 662 aa21.76■■□□□ 1.07
LRCH3-201ENST00000334859 KCNH5Q8NCM2 988 aa21.76■■□□□ 1.07
LRCH3-201ENST00000334859 ZNF142P52746 1687 aaPredicted RBP21.76■■□□□ 1.07
LRCH3-201ENST00000334859 IBTKQ9P2D0 1353 aaPredicted RBP21.76■■□□□ 1.07
LRCH3-201ENST00000334859 USP44Q9H0E7 712 aa21.75■■□□□ 1.07
LRCH3-201ENST00000334859 LGR6Q9HBX8 967 aa21.75■■□□□ 1.07
LRCH3-201ENST00000334859 SSFA2P28290 1259 aa21.75■■□□□ 1.07
LRCH3-201ENST00000334859 LRRC59Q96AG4 307 aaKnown RBP21.75■■□□□ 1.07
LRCH3-201ENST00000334859 ST18O60284 1047 aa21.74■■□□□ 1.07
LRCH3-201ENST00000334859 RGPD2P0DJD1 1756 aa21.74■■□□□ 1.07
LRCH3-201ENST00000334859 FSD2A1L4K1 749 aa21.73■■□□□ 1.07
LRCH3-201ENST00000334859 XPCQ01831 940 aaPredicted RBP21.73■■□□□ 1.07
LRCH3-201ENST00000334859 ZNF530Q6P9A1 599 aaPredicted RBP21.73■■□□□ 1.07
LRCH3-201ENST00000334859 SALL3Q9BXA9 1300 aa21.73■■□□□ 1.07
LRCH3-201ENST00000334859 MED1Q15648 1581 aaPredicted RBP21.73■■□□□ 1.07
LRCH3-201ENST00000334859 TEFQ10587 303 aa21.73■■□□□ 1.07
LRCH3-201ENST00000334859 EIF4A1P60842 406 aaKnown RBP21.72■■□□□ 1.07
LRCH3-201ENST00000334859 LMOD2Q6P5Q4 547 aa21.72■■□□□ 1.07
LRCH3-201ENST00000334859 SRCIN1Q9C0H9 1055 aa21.72■■□□□ 1.07
LRCH3-201ENST00000334859 CHPF2Q9P2E5 772 aa21.72■■□□□ 1.07
LRCH3-201ENST00000334859 TRIM6-TRIM34B2RNG4 842 aa21.71■■□□□ 1.07
LRCH3-201ENST00000334859 XRCC6P12956 609 aaKnown RBP eCLIP21.71■■□□□ 1.07
LRCH3-201ENST00000334859 KDM3BQ7LBC6 1761 aa21.7■■□□□ 1.06
LRCH3-201ENST00000334859 MPRIPQ6WCQ1 1025 aa21.7■■□□□ 1.06
LRCH3-201ENST00000334859 RILPL2Q969X0 211 aa21.7■■□□□ 1.06
LRCH3-201ENST00000334859 TUBGCP6Q96RT7 1819 aa21.7■■□□□ 1.06
LRCH3-201ENST00000334859 KCNQ3O43525 872 aa21.69■■□□□ 1.06
LRCH3-201ENST00000334859 PTMSP20962 102 aa21.69■■□□□ 1.06
LRCH3-201ENST00000334859 ORAI2Q96SN7 254 aa21.69■■□□□ 1.06
LRCH3-201ENST00000334859 AK9Q5TCS8 1911 aa21.69■■□□□ 1.06
LRCH3-201ENST00000334859 GOLGA6L22H0YM25 854 aa21.69■■□□□ 1.06
LRCH3-201ENST00000334859 PLEKHO1Q53GL0 409 aaPredicted RBP21.69■■□□□ 1.06
LRCH3-201ENST00000334859 AKAP4Q5JQC9 854 aa21.69■■□□□ 1.06
LRCH3-201ENST00000334859 IL1RAPL2Q9NP60 686 aa21.69■■□□□ 1.06
LRCH3-201ENST00000334859 LMO7Q8WWI1 1683 aa21.69■■□□□ 1.06
LRCH3-201ENST00000334859 PHRF1Q9P1Y6 1649 aaKnown RBP21.69■■□□□ 1.06
LRCH3-201ENST00000334859 BTBD11A6QL63 1104 aa21.68■■□□□ 1.06
LRCH3-201ENST00000334859 ESYT1Q9BSJ8 1104 aa21.68■■□□□ 1.06
LRCH3-201ENST00000334859 GCP02774 474 aa21.68■■□□□ 1.06
LRCH3-201ENST00000334859 HOXB7P09629 217 aa21.68■■□□□ 1.06
LRCH3-201ENST00000334859 SKOR2Q2VWA4 1001 aaPredicted RBP21.68■■□□□ 1.06
LRCH3-201ENST00000334859 PPP1R42Q7Z4L9 355 aa21.67■■□□□ 1.06
LRCH3-201ENST00000334859 SSH3Q8TE77 659 aa21.67■■□□□ 1.06
LRCH3-201ENST00000334859 NPHP4O75161 1426 aaPredicted RBP21.67■■□□□ 1.06
LRCH3-201ENST00000334859 ANXA1P04083 346 aa21.67■■□□□ 1.06
LRCH3-201ENST00000334859 C1orf141Q5JVX7 400 aa21.67■■□□□ 1.06
LRCH3-201ENST00000334859 PXDNQ92626 1479 aa21.66■■□□□ 1.06
LRCH3-201ENST00000334859 PI4KAP2A4QPH2 592 aa21.66■■□□□ 1.06
LRCH3-201ENST00000334859 PI4KAP1Q8N8J0 262 aa21.66■■□□□ 1.06
LRCH3-201ENST00000334859 DNAAF4Q8WXU2 420 aa21.66■■□□□ 1.06
LRCH3-201ENST00000334859 CHMP4AQ9BY43 222 aa21.66■■□□□ 1.06
LRCH3-201ENST00000334859 PANK2Q9BZ23 570 aa21.66■■□□□ 1.06
LRCH3-201ENST00000334859 STAP2Q9UGK3 403 aa21.66■■□□□ 1.06
LRCH3-201ENST00000334859 SURF6O75683 361 aaKnown RBP21.66■■□□□ 1.06
LRCH3-201ENST00000334859 ANO2Q9NQ90 1003 aa21.66■■□□□ 1.06
LRCH3-201ENST00000334859 SRGAP3O43295 1099 aa21.65■■□□□ 1.06
LRCH3-201ENST00000334859 NUCB2P80303 420 aa21.65■■□□□ 1.06
LRCH3-201ENST00000334859 ARHGEF25Q86VW2 580 aa21.65■■□□□ 1.06
LRCH3-201ENST00000334859 BAG4O95429 457 aaKnown RBP21.64■■□□□ 1.06
LRCH3-201ENST00000334859 NBPF7P0C2Y1 421 aaPredicted RBP21.64■■□□□ 1.06
LRCH3-201ENST00000334859 CHMLP26374 656 aa21.64■■□□□ 1.06
LRCH3-201ENST00000334859 MRE11P49959 708 aa21.64■■□□□ 1.06
LRCH3-201ENST00000334859 AMOTQ4VCS5 1084 aa21.64■■□□□ 1.06
LRCH3-201ENST00000334859 MCCP23508 829 aa21.64■■□□□ 1.05
LRCH3-201ENST00000334859 NUTM1Q86Y26 1132 aa21.64■■□□□ 1.05
LRCH3-201ENST00000334859 ANKRD24Q8TF21 1146 aa21.64■■□□□ 1.05
LRCH3-201ENST00000334859 NEK4P51957 841 aa21.63■■□□□ 1.05
LRCH3-201ENST00000334859 UNC5CLQ8IV45 518 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 204 ms