RNA–Protein interactions for RNA: ENST00000333674.5

PMS2P6-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 6, humanhuman

BASIC

Gene PMS2P6, Length 710 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P6-201ENST00000333674 CASZ1Q86V15 1759 aa13.1□□□□□ -0.31
PMS2P6-201ENST00000333674 POLD1P28340 1107 aa13.1□□□□□ -0.31
PMS2P6-201ENST00000333674 ATP6V1AP38606 617 aa13.1□□□□□ -0.31
PMS2P6-201ENST00000333674 NFATC2IPQ8NCF5 419 aa13.1□□□□□ -0.31
PMS2P6-201ENST00000333674 AK7Q96M32 723 aa13.1□□□□□ -0.31
PMS2P6-201ENST00000333674 PPP2R1AP30153 589 aa13.09□□□□□ -0.31
PMS2P6-201ENST00000333674 RBM42Q9BTD8 480 aaKnown RBP13.09□□□□□ -0.31
PMS2P6-201ENST00000333674 TOGARAM1Q9Y4F4 1720 aa13.08□□□□□ -0.32
PMS2P6-201ENST00000333674 COL23A1Q86Y22 540 aaPredicted RBP13.08□□□□□ -0.32
PMS2P6-201ENST00000333674 ARXQ96QS3 562 aa13.08□□□□□ -0.32
PMS2P6-201ENST00000333674 MTHFSDQ2M296 383 aaKnown RBP13.07□□□□□ -0.32
PMS2P6-201ENST00000333674 SGIP1Q9BQI5 828 aa13.07□□□□□ -0.32
PMS2P6-201ENST00000333674 KDM6AO15550 1401 aaPredicted RBP13.06□□□□□ -0.32
PMS2P6-201ENST00000333674 LINC00116Q8NCU8 138 aa13.06□□□□□ -0.32
PMS2P6-201ENST00000333674 SYT17Q9BSW7 474 aa13.06□□□□□ -0.32
PMS2P6-201ENST00000333674 RNMTO43148 476 aaKnown RBP13.05□□□□□ -0.32
PMS2P6-201ENST00000333674 PTCD1O75127 700 aaKnown RBP13.05□□□□□ -0.32
PMS2P6-201ENST00000333674 U2AF1L5P0DN76 240 aaPredicted RBP13.05□□□□□ -0.32
PMS2P6-201ENST00000333674 U2AF1Q01081 240 aaKnown RBP eCLIP13.05□□□□□ -0.32
PMS2P6-201ENST00000333674 ITPK1Q13572 414 aa13.05□□□□□ -0.32
PMS2P6-201ENST00000333674 GAS2L2Q8NHY3 880 aa13.05□□□□□ -0.32
PMS2P6-201ENST00000333674 FHDC1Q9C0D6 1143 aaPredicted RBP13.05□□□□□ -0.32
PMS2P6-201ENST00000333674 SLC52A2Q9HAB3 445 aa13.05□□□□□ -0.32
PMS2P6-201ENST00000333674 LGR6Q9HBX8 967 aa13.05□□□□□ -0.32
PMS2P6-201ENST00000333674 QSER1Q2KHR3 1735 aa13.05□□□□□ -0.32
PMS2P6-201ENST00000333674 PHF14O94880 888 aa13.04□□□□□ -0.32
PMS2P6-201ENST00000333674 SSFA2P28290 1259 aa13.04□□□□□ -0.32
PMS2P6-201ENST00000333674 ZEB1P37275 1124 aaPredicted RBP13.04□□□□□ -0.32
PMS2P6-201ENST00000333674 DDX10Q13206 875 aaKnown RBP13.04□□□□□ -0.32
PMS2P6-201ENST00000333674 C5P01031 1676 aa13.04□□□□□ -0.32
PMS2P6-201ENST00000333674 COL3A1P02461 1466 aaPredicted RBP13.04□□□□□ -0.32
PMS2P6-201ENST00000333674 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.03□□□□□ -0.32
PMS2P6-201ENST00000333674 GNAT3A8MTJ3 354 aa13.03□□□□□ -0.32
PMS2P6-201ENST00000333674 GNPATO15228 680 aa13.03□□□□□ -0.32
PMS2P6-201ENST00000333674 FCHSD2O94868 740 aa13.03□□□□□ -0.32
PMS2P6-201ENST00000333674 PRKAR2BP31323 418 aa13.03□□□□□ -0.32
PMS2P6-201ENST00000333674 RC3H1Q5TC82 1133 aaKnown RBP13.03□□□□□ -0.32
PMS2P6-201ENST00000333674 FOXD4L1Q9NU39 408 aa13.03□□□□□ -0.32
PMS2P6-201ENST00000333674 RTCBQ9Y3I0 505 aaKnown RBP13.03□□□□□ -0.32
PMS2P6-201ENST00000333674 TAF1LQ8IZX4 1826 aa13.03□□□□□ -0.32
PMS2P6-201ENST00000333674 NEFMP07197 916 aa13.02□□□□□ -0.33
PMS2P6-201ENST00000333674 TRAPPC3LQ5T215 181 aa13.02□□□□□ -0.33
PMS2P6-201ENST00000333674 KLHL34Q8N239 644 aa13.02□□□□□ -0.33
PMS2P6-201ENST00000333674 SLC4A9Q96Q91 983 aa13.02□□□□□ -0.33
PMS2P6-201ENST00000333674 RSPH6AQ9H0K4 717 aa13.02□□□□□ -0.33
PMS2P6-201ENST00000333674 C4BP0C0L5 1744 aa13.02□□□□□ -0.33
PMS2P6-201ENST00000333674 TEFQ10587 303 aa13.01□□□□□ -0.33
PMS2P6-201ENST00000333674 RALBP1Q15311 655 aa13.01□□□□□ -0.33
PMS2P6-201ENST00000333674 MSL1Q68DK7 614 aa13.01□□□□□ -0.33
PMS2P6-201ENST00000333674 RPS6KA4O75676 772 aa13□□□□□ -0.33
PMS2P6-201ENST00000333674 SMIM5Q71RC9 77 aa13□□□□□ -0.33
PMS2P6-201ENST00000333674 PHACTR3Q96KR7 559 aa13□□□□□ -0.33
PMS2P6-201ENST00000333674 TUBGCP6Q96RT7 1819 aa12.99□□□□□ -0.33
PMS2P6-201ENST00000333674 SCN11AQ9UI33 1791 aa12.99□□□□□ -0.33
PMS2P6-201ENST00000333674 MAP3K5Q99683 1374 aa12.99□□□□□ -0.33
PMS2P6-201ENST00000333674 CNTNAP4Q9C0A0 1308 aa12.99□□□□□ -0.33
PMS2P6-201ENST00000333674 RFC4P35249 363 aa12.99□□□□□ -0.33
PMS2P6-201ENST00000333674 SLC39A6Q13433 755 aa12.99□□□□□ -0.33
PMS2P6-201ENST00000333674 AMIGO3Q86WK7 504 aa12.99□□□□□ -0.33
PMS2P6-201ENST00000333674 TTC5Q8N0Z6 440 aa12.99□□□□□ -0.33
PMS2P6-201ENST00000333674 IL17REQ8NFR9 667 aa12.99□□□□□ -0.33
PMS2P6-201ENST00000333674 RTF1Q92541 710 aaKnown RBP12.99□□□□□ -0.33
PMS2P6-201ENST00000333674 PNNQ9H307 717 aaKnown RBP12.99□□□□□ -0.33
PMS2P6-201ENST00000333674 CRKLP46109 303 aaKnown RBP12.98□□□□□ -0.33
PMS2P6-201ENST00000333674 VSIG10Q8N0Z9 540 aa12.97□□□□□ -0.33
PMS2P6-201ENST00000333674 NLGN1Q8N2Q7 840 aa12.97□□□□□ -0.33
PMS2P6-201ENST00000333674 ARHGEF1Q92888 912 aaKnown RBP12.97□□□□□ -0.33
PMS2P6-201ENST00000333674 ZNF831Q5JPB2 1677 aa12.96□□□□□ -0.33
PMS2P6-201ENST00000333674 UBR3Q6ZT12 1888 aa12.96□□□□□ -0.33
PMS2P6-201ENST00000333674 HTATSF1O43719 755 aaKnown RBP12.96□□□□□ -0.33
PMS2P6-201ENST00000333674 GPR162Q16538 588 aa12.96□□□□□ -0.33
PMS2P6-201ENST00000333674 DNAJC10Q8IXB1 793 aa12.96□□□□□ -0.33
PMS2P6-201ENST00000333674 CD2APQ9Y5K6 639 aa12.96□□□□□ -0.33
PMS2P6-201ENST00000333674 BTBD11A6QL63 1104 aa12.95□□□□□ -0.34
PMS2P6-201ENST00000333674 STARD3NLO95772 234 aa12.95□□□□□ -0.34
PMS2P6-201ENST00000333674 ZNF790Q6PG37 636 aa12.95□□□□□ -0.34
PMS2P6-201ENST00000333674 TEX13AQ9BXU3 409 aaPredicted RBP12.95□□□□□ -0.34
PMS2P6-201ENST00000333674 CCDC87Q9NVE4 849 aa12.95□□□□□ -0.34
PMS2P6-201ENST00000333674 COL24A1Q17RW2 1714 aa12.94□□□□□ -0.34
PMS2P6-201ENST00000333674 MRC1P22897 1456 aa12.94□□□□□ -0.34
PMS2P6-201ENST00000333674 CYP19A1P11511 503 aaPredicted RBP12.94□□□□□ -0.34
PMS2P6-201ENST00000333674 INTS5Q6P9B9 1019 aaKnown RBP12.94□□□□□ -0.34
PMS2P6-201ENST00000333674 PELP1Q8IZL8 1130 aaKnown RBP12.94□□□□□ -0.34
PMS2P6-201ENST00000333674 MMP10P09238 476 aa12.93□□□□□ -0.34
PMS2P6-201ENST00000333674 YY1P25490 414 aa12.93□□□□□ -0.34
PMS2P6-201ENST00000333674 NLGN2Q8NFZ4 835 aa12.93□□□□□ -0.34
PMS2P6-201ENST00000333674 FMNL2Q96PY5 1086 aa12.93□□□□□ -0.34
PMS2P6-201ENST00000333674 CEMIPQ8WUJ3 1361 aa12.93□□□□□ -0.34
PMS2P6-201ENST00000333674 VIRMAQ69YN4 1812 aaKnown RBP12.92□□□□□ -0.34
PMS2P6-201ENST00000333674 MYBBP1AQ9BQG0 1328 aaKnown RBP12.92□□□□□ -0.34
PMS2P6-201ENST00000333674 MAPK8IP3Q9UPT6 1336 aa12.92□□□□□ -0.34
PMS2P6-201ENST00000333674 ZPR1O75312 459 aa12.92□□□□□ -0.34
PMS2P6-201ENST00000333674 GYS1P13807 737 aa12.92□□□□□ -0.34
PMS2P6-201ENST00000333674 MCM10Q7L590 875 aa12.92□□□□□ -0.34
PMS2P6-201ENST00000333674 ZNF496Q96IT1 587 aaPredicted RBP12.92□□□□□ -0.34
PMS2P6-201ENST00000333674 ADAMTS7Q9UKP4 1686 aa12.92□□□□□ -0.34
PMS2P6-201ENST00000333674 MYH14Q7Z406 1995 aaKnown RBP12.91□□□□□ -0.34
PMS2P6-201ENST00000333674 TAF7Q15545 349 aaPredicted RBP12.91□□□□□ -0.34
PMS2P6-201ENST00000333674 NPM2Q86SE8 214 aaKnown RBP12.91□□□□□ -0.34
PMS2P6-201ENST00000333674 PARP3Q9Y6F1 533 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms