RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 BCAR3O75815 825 aa11.28□□□□□ -0.6
LSAMP-201ENST00000333617 BCL2L12Q9HB09 334 aa11.28□□□□□ -0.6
LSAMP-201ENST00000333617 PIK3C2AO00443 1686 aa11.28□□□□□ -0.6
LSAMP-201ENST00000333617 PEAK1Q9H792 1746 aa11.27□□□□□ -0.6
LSAMP-201ENST00000333617 MARF1Q9Y4F3 1742 aaKnown RBP11.27□□□□□ -0.6
LSAMP-201ENST00000333617 USP54Q70EL1 1684 aa11.27□□□□□ -0.61
LSAMP-201ENST00000333617 KCNA6P17658 529 aa11.27□□□□□ -0.61
LSAMP-201ENST00000333617 IL13P35225 146 aa11.27□□□□□ -0.61
LSAMP-201ENST00000333617 RSPH6AQ9H0K4 717 aa11.27□□□□□ -0.61
LSAMP-201ENST00000333617 SSH2Q76I76 1423 aa11.26□□□□□ -0.61
LSAMP-201ENST00000333617 RIPK4P57078 832 aa11.26□□□□□ -0.61
LSAMP-201ENST00000333617 IL16Q14005 1332 aa11.26□□□□□ -0.61
LSAMP-201ENST00000333617 TTC21AQ8NDW8 1320 aa11.26□□□□□ -0.61
LSAMP-201ENST00000333617 RGPD1P0DJD0 1748 aa11.25□□□□□ -0.61
LSAMP-201ENST00000333617 PRKAR2BP31323 418 aa11.25□□□□□ -0.61
LSAMP-201ENST00000333617 RARSP54136 660 aaKnown RBP11.25□□□□□ -0.61
LSAMP-201ENST00000333617 RRS1Q15050 365 aaKnown RBP11.25□□□□□ -0.61
LSAMP-201ENST00000333617 PMFBP1Q8TBY8 1022 aa11.25□□□□□ -0.61
LSAMP-201ENST00000333617 HMOX1P09601 288 aa11.24□□□□□ -0.61
LSAMP-201ENST00000333617 CANXP27824 592 aaKnown RBP11.24□□□□□ -0.61
LSAMP-201ENST00000333617 PDE3AQ14432 1141 aa11.24□□□□□ -0.61
LSAMP-201ENST00000333617 NGDNQ8NEJ9 315 aaKnown RBP11.24□□□□□ -0.61
LSAMP-201ENST00000333617 ZDHHC16Q969W1 377 aa11.24□□□□□ -0.61
LSAMP-201ENST00000333617 USP31Q70CQ4 1352 aa11.24□□□□□ -0.61
LSAMP-201ENST00000333617 CT47B1P0C2W7 299 aaPredicted RBP11.24□□□□□ -0.61
LSAMP-201ENST00000333617 PTPREP23469 700 aa11.24□□□□□ -0.61
LSAMP-201ENST00000333617 IRX2Q9BZI1 471 aaPredicted RBP11.24□□□□□ -0.61
LSAMP-201ENST00000333617 LTN1O94822 1766 aa11.23□□□□□ -0.61
LSAMP-201ENST00000333617 FANCIQ9NVI1 1328 aa11.23□□□□□ -0.61
LSAMP-201ENST00000333617 NFE2L2Q16236 605 aa11.23□□□□□ -0.61
LSAMP-201ENST00000333617 TSR2Q969E8 191 aaKnown RBP11.22□□□□□ -0.61
LSAMP-201ENST00000333617 NPHP4O75161 1426 aaPredicted RBP11.22□□□□□ -0.61
LSAMP-201ENST00000333617 DPYSL4O14531 572 aa11.21□□□□□ -0.61
LSAMP-201ENST00000333617 HRO43593 1189 aa11.21□□□□□ -0.61
LSAMP-201ENST00000333617 FRAT1Q92837 279 aaPredicted RBP11.21□□□□□ -0.61
LSAMP-201ENST00000333617 PHACTR3Q96KR7 559 aa11.21□□□□□ -0.61
LSAMP-201ENST00000333617 TCERG1O14776 1098 aaKnown RBP11.2□□□□□ -0.62
LSAMP-201ENST00000333617 CALD1Q05682 793 aaKnown RBP11.2□□□□□ -0.62
LSAMP-201ENST00000333617 CENPQQ7L2Z9 268 aaPredicted RBP11.2□□□□□ -0.62
LSAMP-201ENST00000333617 ADAM33Q9BZ11 813 aa11.2□□□□□ -0.62
LSAMP-201ENST00000333617 KDM2BQ8NHM5 1336 aa11.2□□□□□ -0.62
LSAMP-201ENST00000333617 NWD1Q149M9 1564 aa11.2□□□□□ -0.62
LSAMP-201ENST00000333617 EXOSC9Q06265 439 aaKnown RBP11.2□□□□□ -0.62
LSAMP-201ENST00000333617 EIF4A2Q14240 407 aaKnown RBP11.2□□□□□ -0.62
LSAMP-201ENST00000333617 SLC4A5Q9BY07 1137 aa11.2□□□□□ -0.62
LSAMP-201ENST00000333617 VIRMAQ69YN4 1812 aaKnown RBP11.19□□□□□ -0.62
LSAMP-201ENST00000333617 ADGRL3Q9HAR2 1447 aa11.19□□□□□ -0.62
LSAMP-201ENST00000333617 LMOD3Q0VAK6 560 aa11.19□□□□□ -0.62
LSAMP-201ENST00000333617 PANK1Q8TE04 598 aa11.19□□□□□ -0.62
LSAMP-201ENST00000333617 BCL2L13Q9BXK5 485 aa11.19□□□□□ -0.62
LSAMP-201ENST00000333617 VPS9D1Q9Y2B5 631 aa11.19□□□□□ -0.62
LSAMP-201ENST00000333617 PCDHGA10Q9Y5H3 936 aa11.19□□□□□ -0.62
LSAMP-201ENST00000333617 SBNO1A3KN83 1393 aa11.18□□□□□ -0.62
LSAMP-201ENST00000333617 PHF14O94880 888 aa11.18□□□□□ -0.62
LSAMP-201ENST00000333617 TYW1BQ6NUM6 668 aa11.18□□□□□ -0.62
LSAMP-201ENST00000333617 FBXW7Q969H0 707 aa11.18□□□□□ -0.62
LSAMP-201ENST00000333617 WDR70Q9NW82 654 aa11.18□□□□□ -0.62
LSAMP-201ENST00000333617 COG6Q9Y2V7 657 aa11.18□□□□□ -0.62
LSAMP-201ENST00000333617 MS4A1P11836 297 aa11.17□□□□□ -0.62
LSAMP-201ENST00000333617 AAMPQ13685 434 aa11.17□□□□□ -0.62
LSAMP-201ENST00000333617 HSP90AB2PQ58FF8 381 aa11.17□□□□□ -0.62
LSAMP-201ENST00000333617 SULT6B1Q6IMI4 303 aa11.17□□□□□ -0.62
LSAMP-201ENST00000333617 SMC4Q9NTJ3 1288 aa11.17□□□□□ -0.62
LSAMP-201ENST00000333617 MAP3K19Q56UN5 1328 aa11.17□□□□□ -0.62
LSAMP-201ENST00000333617 FLT4P35916 1363 aa11.17□□□□□ -0.62
LSAMP-201ENST00000333617 ZKSCAN2Q63HK3 967 aa11.16□□□□□ -0.62
LSAMP-201ENST00000333617 IFT57Q9NWB7 429 aa11.16□□□□□ -0.62
LSAMP-201ENST00000333617 CACNA1FO60840 1977 aa11.16□□□□□ -0.62
LSAMP-201ENST00000333617 ARHGEF10O15013 1369 aa11.16□□□□□ -0.62
LSAMP-201ENST00000333617 GNAI1P63096 354 aa11.16□□□□□ -0.62
LSAMP-201ENST00000333617 CLUAP1Q96AJ1 413 aa11.16□□□□□ -0.62
LSAMP-201ENST00000333617 LAS1LQ9Y4W2 734 aaKnown RBP11.16□□□□□ -0.62
LSAMP-201ENST00000333617 RGPD2P0DJD1 1756 aa11.15□□□□□ -0.62
LSAMP-201ENST00000333617 AMPHP49418 695 aa11.15□□□□□ -0.62
LSAMP-201ENST00000333617 KIF1AQ12756 1690 aa11.15□□□□□ -0.62
LSAMP-201ENST00000333617 E2F4Q16254 413 aa11.15□□□□□ -0.62
LSAMP-201ENST00000333617 KIF24Q5T7B8 1368 aa11.15□□□□□ -0.62
LSAMP-201ENST00000333617 AEBP1Q8IUX7 1158 aa11.15□□□□□ -0.62
LSAMP-201ENST00000333617 ABTB2Q8N961 1025 aa11.15□□□□□ -0.62
LSAMP-201ENST00000333617 SSH1Q8WYL5 1049 aa11.15□□□□□ -0.62
LSAMP-201ENST00000333617 RBM33Q96EV2 1170 aaKnown RBP11.15□□□□□ -0.62
LSAMP-201ENST00000333617 STRCP1A6NGW2 1772 aa11.14□□□□□ -0.63
LSAMP-201ENST00000333617 RLBP1P12271 317 aa11.14□□□□□ -0.63
LSAMP-201ENST00000333617 ALDH1L2Q3SY69 923 aa11.14□□□□□ -0.63
LSAMP-201ENST00000333617 C14orf37Q86TY3 774 aa11.14□□□□□ -0.63
LSAMP-201ENST00000333617 FTSJ3Q8IY81 847 aaKnown RBP11.14□□□□□ -0.63
LSAMP-201ENST00000333617 ZNF428Q96B54 188 aa11.14□□□□□ -0.63
LSAMP-201ENST00000333617 EPAS1Q99814 870 aa11.14□□□□□ -0.63
LSAMP-201ENST00000333617 THUMPD2Q9BTF0 503 aaKnown RBP11.14□□□□□ -0.63
LSAMP-201ENST00000333617 ZBED2Q9BTP6 218 aa11.14□□□□□ -0.63
LSAMP-201ENST00000333617 TNNQ9UQP3 1299 aa11.14□□□□□ -0.63
LSAMP-201ENST00000333617 KIF16BQ96L93 1317 aa11.13□□□□□ -0.63
LSAMP-201ENST00000333617 ZNF853P0CG23 659 aa11.13□□□□□ -0.63
LSAMP-201ENST00000333617 MVPQ14764 893 aaKnown RBP11.13□□□□□ -0.63
LSAMP-201ENST00000333617 DZIP1LQ8IYY4 767 aaKnown RBP11.13□□□□□ -0.63
LSAMP-201ENST00000333617 HCSTQ9UBK5 93 aa11.13□□□□□ -0.63
LSAMP-201ENST00000333617 PHRF1Q9P1Y6 1649 aaKnown RBP11.13□□□□□ -0.63
LSAMP-201ENST00000333617 TRPM3Q9HCF6 1732 aaPredicted RBP11.12□□□□□ -0.63
LSAMP-201ENST00000333617 IPO8O15397 1037 aaKnown RBP11.12□□□□□ -0.63
LSAMP-201ENST00000333617 ESCO1Q5FWF5 840 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms