RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 MST1RQ04912 1400 aa13.29□□□□□ -0.28
CCDC172-201ENST00000333254 AK9Q5TCS8 1911 aa13.28□□□□□ -0.28
CCDC172-201ENST00000333254 HSP90AB1P08238 724 aaKnown RBP13.28□□□□□ -0.28
CCDC172-201ENST00000333254 RAB3GAP1Q15042 981 aa13.28□□□□□ -0.28
CCDC172-201ENST00000333254 TAF7Q15545 349 aaPredicted RBP13.28□□□□□ -0.28
CCDC172-201ENST00000333254 IP6K1Q92551 441 aa13.28□□□□□ -0.28
CCDC172-201ENST00000333254 SALL3Q9BXA9 1300 aa13.28□□□□□ -0.28
CCDC172-201ENST00000333254 FLIIQ13045 1269 aa13.28□□□□□ -0.28
CCDC172-201ENST00000333254 G2E3Q7L622 706 aa13.28□□□□□ -0.28
CCDC172-201ENST00000333254 ANKLE2Q86XL3 938 aa13.28□□□□□ -0.28
CCDC172-201ENST00000333254 KCNH5Q8NCM2 988 aa13.28□□□□□ -0.28
CCDC172-201ENST00000333254 USP26Q9BXU7 913 aa13.28□□□□□ -0.28
CCDC172-201ENST00000333254 AOX1Q06278 1338 aa13.27□□□□□ -0.28
CCDC172-201ENST00000333254 FSD2A1L4K1 749 aa13.27□□□□□ -0.29
CCDC172-201ENST00000333254 EPB41L2O43491 1005 aaKnown RBP13.27□□□□□ -0.29
CCDC172-201ENST00000333254 ABTB2Q8N961 1025 aa13.27□□□□□ -0.29
CCDC172-201ENST00000333254 IL17REQ8NFR9 667 aa13.27□□□□□ -0.29
CCDC172-201ENST00000333254 GBP4Q96PP9 640 aa13.27□□□□□ -0.29
CCDC172-201ENST00000333254 ABCC6O95255 1503 aa13.26□□□□□ -0.29
CCDC172-201ENST00000333254 CRYBG1Q9Y4K1 1723 aa13.26□□□□□ -0.29
CCDC172-201ENST00000333254 REC8O95072 547 aa13.26□□□□□ -0.29
CCDC172-201ENST00000333254 SDSP20132 328 aa13.26□□□□□ -0.29
CCDC172-201ENST00000333254 IBTKQ9P2D0 1353 aaPredicted RBP13.26□□□□□ -0.29
CCDC172-201ENST00000333254 SOX12O15370 315 aa13.25□□□□□ -0.29
CCDC172-201ENST00000333254 ATP8B2P98198 1209 aa13.25□□□□□ -0.29
CCDC172-201ENST00000333254 SKOR2Q2VWA4 1001 aaPredicted RBP13.25□□□□□ -0.29
CCDC172-201ENST00000333254 PLEKHG2Q9H7P9 1386 aa13.25□□□□□ -0.29
CCDC172-201ENST00000333254 IL17RAQ96F46 866 aa13.24□□□□□ -0.29
CCDC172-201ENST00000333254 SRCIN1Q9C0H9 1055 aa13.24□□□□□ -0.29
CCDC172-201ENST00000333254 MIS18AQ9NYP9 233 aa13.24□□□□□ -0.29
CCDC172-201ENST00000333254 TRAK2O60296 914 aa13.24□□□□□ -0.29
CCDC172-201ENST00000333254 PDE1AP54750 535 aa13.24□□□□□ -0.29
CCDC172-201ENST00000333254 STAP2Q9UGK3 403 aa13.24□□□□□ -0.29
CCDC172-201ENST00000333254 ALS2Q96Q42 1657 aa13.23□□□□□ -0.29
CCDC172-201ENST00000333254 FKBP5Q13451 457 aaPredicted RBP13.23□□□□□ -0.29
CCDC172-201ENST00000333254 C16orf71Q8IYS4 520 aaPredicted RBP13.23□□□□□ -0.29
CCDC172-201ENST00000333254 TNPO1Q92973 898 aaKnown RBP13.23□□□□□ -0.29
CCDC172-201ENST00000333254 NPHP4O75161 1426 aaPredicted RBP13.23□□□□□ -0.29
CCDC172-201ENST00000333254 F6X3S4 739 aa13.22□□□□□ -0.29
CCDC172-201ENST00000333254 ERC2O15083 957 aa13.22□□□□□ -0.29
CCDC172-201ENST00000333254 CD2BP2O95400 341 aaKnown RBP13.22□□□□□ -0.29
CCDC172-201ENST00000333254 SPRYD3Q8NCJ5 442 aa13.22□□□□□ -0.29
CCDC172-201ENST00000333254 OTUD7AQ8TE49 926 aaPredicted RBP13.22□□□□□ -0.29
CCDC172-201ENST00000333254 LRRCC1Q9C099 1032 aa13.22□□□□□ -0.29
CCDC172-201ENST00000333254 BRPF3Q9ULD4 1205 aa13.22□□□□□ -0.29
CCDC172-201ENST00000333254 SLC4A10Q6U841 1118 aa13.21□□□□□ -0.29
CCDC172-201ENST00000333254 SSH3Q8TE77 659 aa13.21□□□□□ -0.29
CCDC172-201ENST00000333254 CWC22Q9HCG8 908 aaKnown RBP13.21□□□□□ -0.29
CCDC172-201ENST00000333254 GOLGA6L3A6NEY3 463 aa13.21□□□□□ -0.3
CCDC172-201ENST00000333254 RAB11FIP3O75154 756 aa13.21□□□□□ -0.3
CCDC172-201ENST00000333254 AMOTQ4VCS5 1084 aa13.21□□□□□ -0.3
CCDC172-201ENST00000333254 SCN11AQ9UI33 1791 aa13.2□□□□□ -0.3
CCDC172-201ENST00000333254 SMARCA5O60264 1052 aaPredicted RBP13.2□□□□□ -0.3
CCDC172-201ENST00000333254 ST18O60284 1047 aa13.2□□□□□ -0.3
CCDC172-201ENST00000333254 HSP90AA1P07900 732 aaKnown RBP13.2□□□□□ -0.3
CCDC172-201ENST00000333254 ANAPC15P60006 121 aa13.2□□□□□ -0.3
CCDC172-201ENST00000333254 NUCB2P80303 420 aa13.2□□□□□ -0.3
CCDC172-201ENST00000333254 AKAP4Q5JQC9 854 aa13.2□□□□□ -0.3
CCDC172-201ENST00000333254 HEG1Q9ULI3 1381 aa13.19□□□□□ -0.3
CCDC172-201ENST00000333254 MX1P20591 662 aa13.19□□□□□ -0.3
CCDC172-201ENST00000333254 EIF4A1P60842 406 aaKnown RBP13.19□□□□□ -0.3
CCDC172-201ENST00000333254 POLA2Q14181 598 aa13.19□□□□□ -0.3
CCDC172-201ENST00000333254 HDGFL1Q5TGJ6 251 aa13.19□□□□□ -0.3
CCDC172-201ENST00000333254 FAM43AQ8N2R8 423 aa13.19□□□□□ -0.3
CCDC172-201ENST00000333254 USP44Q9H0E7 712 aa13.19□□□□□ -0.3
CCDC172-201ENST00000333254 CYP2E1P05181 493 aaPredicted RBP13.18□□□□□ -0.3
CCDC172-201ENST00000333254 MCM2P49736 904 aa13.18□□□□□ -0.3
CCDC172-201ENST00000333254 MRE11P49959 708 aa13.18□□□□□ -0.3
CCDC172-201ENST00000333254 PLEKHO1Q53GL0 409 aaPredicted RBP13.18□□□□□ -0.3
CCDC172-201ENST00000333254 RBM42Q9BTD8 480 aaKnown RBP13.18□□□□□ -0.3
CCDC172-201ENST00000333254 RGPD5Q99666 1765 aa13.18□□□□□ -0.3
CCDC172-201ENST00000333254 GOLGA6L22H0YM25 854 aa13.18□□□□□ -0.3
CCDC172-201ENST00000333254 UBTFL1P0CB47 393 aaPredicted RBP13.18□□□□□ -0.3
CCDC172-201ENST00000333254 NBPF6Q5VWK0 638 aa13.18□□□□□ -0.3
CCDC172-201ENST00000333254 ARHGEF25Q86VW2 580 aa13.18□□□□□ -0.3
CCDC172-201ENST00000333254 NBPF4Q96M43 638 aa13.18□□□□□ -0.3
CCDC172-201ENST00000333254 PNMA6EA0A0J9YXQ4 647 aa13.17□□□□□ -0.3
CCDC172-201ENST00000333254 NUTM2GQ5VZR2 741 aa13.17□□□□□ -0.3
CCDC172-201ENST00000333254 ESYT1Q9BSJ8 1104 aa13.17□□□□□ -0.3
CCDC172-201ENST00000333254 PSME1Q06323 249 aa13.16□□□□□ -0.3
CCDC172-201ENST00000333254 MTX1Q13505 466 aa13.16□□□□□ -0.3
CCDC172-201ENST00000333254 HDAC5Q9UQL6 1122 aa13.16□□□□□ -0.3
CCDC172-201ENST00000333254 EXOC6BQ9Y2D4 811 aa13.16□□□□□ -0.3
CCDC172-201ENST00000333254 LRRFIP2Q9Y608 721 aaKnown RBP13.16□□□□□ -0.3
CCDC172-201ENST00000333254 USP42Q9H9J4 1324 aaKnown RBP13.16□□□□□ -0.3
CCDC172-201ENST00000333254 MCCP23508 829 aa13.15□□□□□ -0.3
CCDC172-201ENST00000333254 HSP90AB4PQ58FF6 505 aa13.15□□□□□ -0.3
CCDC172-201ENST00000333254 PXDNQ92626 1479 aa13.15□□□□□ -0.3
CCDC172-201ENST00000333254 DCCP43146 1447 aa13.15□□□□□ -0.3
CCDC172-201ENST00000333254 COL18A1P39060 1754 aa13.15□□□□□ -0.3
CCDC172-201ENST00000333254 XRCC6P12956 609 aaKnown RBP eCLIP13.15□□□□□ -0.31
CCDC172-201ENST00000333254 DNAAF4Q8WXU2 420 aa13.15□□□□□ -0.31
CCDC172-201ENST00000333254 LTV1Q96GA3 475 aaPredicted RBP13.15□□□□□ -0.31
CCDC172-201ENST00000333254 PKD1L3Q7Z443 1732 aa13.14□□□□□ -0.31
CCDC172-201ENST00000333254 PARP4Q9UKK3 1724 aaKnown RBP13.14□□□□□ -0.31
CCDC172-201ENST00000333254 ALDH1L1O75891 902 aa13.14□□□□□ -0.31
CCDC172-201ENST00000333254 CHMLP26374 656 aa13.14□□□□□ -0.31
CCDC172-201ENST00000333254 TEFQ10587 303 aa13.14□□□□□ -0.31
CCDC172-201ENST00000333254 KLHL40Q2TBA0 621 aa13.14□□□□□ -0.31
CCDC172-201ENST00000333254 ESCO1Q5FWF5 840 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms