RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 GORABQ5T7V8 394 aa24.58■■□□□ 1.53
CMTM4-201ENST00000330687 SHPRHQ149N8 1683 aa24.58■■□□□ 1.53
CMTM4-201ENST00000330687 SMTNL1A8MU46 457 aa24.58■■□□□ 1.52
CMTM4-201ENST00000330687 POLR3GO15318 223 aaPredicted RBP24.58■■□□□ 1.52
CMTM4-201ENST00000330687 KIF18AQ8NI77 898 aa24.58■■□□□ 1.52
CMTM4-201ENST00000330687 CTIFO43310 598 aaKnown RBP24.57■■□□□ 1.52
CMTM4-201ENST00000330687 CUL4AQ13619 759 aa24.57■■□□□ 1.52
CMTM4-201ENST00000330687 CEP135Q66GS9 1140 aa24.57■■□□□ 1.52
CMTM4-201ENST00000330687 ATP10AO60312 1499 aa24.57■■□□□ 1.52
CMTM4-201ENST00000330687 RPAP2Q8IXW5 612 aaPredicted RBP24.57■■□□□ 1.52
CMTM4-201ENST00000330687 TFIP11Q9UBB9 837 aaKnown RBP24.57■■□□□ 1.52
CMTM4-201ENST00000330687 FCHSD2O94868 740 aa24.56■■□□□ 1.52
CMTM4-201ENST00000330687 TPM3P06753 285 aa24.56■■□□□ 1.52
CMTM4-201ENST00000330687 ANO6Q4KMQ2 910 aa24.56■■□□□ 1.52
CMTM4-201ENST00000330687 TTC37Q6PGP7 1564 aa24.56■■□□□ 1.52
CMTM4-201ENST00000330687 SOX12O15370 315 aa24.55■■□□□ 1.52
CMTM4-201ENST00000330687 ARID5BQ14865 1188 aa24.55■■□□□ 1.52
CMTM4-201ENST00000330687 UNC5CLQ8IV45 518 aa24.55■■□□□ 1.52
CMTM4-201ENST00000330687 ARHGEF5Q12774 1597 aa24.55■■□□□ 1.52
CMTM4-201ENST00000330687 MAST1Q9Y2H9 1570 aa24.55■■□□□ 1.52
CMTM4-201ENST00000330687 CLIP2Q9UDT6 1046 aa24.55■■□□□ 1.52
CMTM4-201ENST00000330687 KMT5BQ4FZB7 885 aa24.54■■□□□ 1.52
CMTM4-201ENST00000330687 INTS4Q96HW7 963 aaKnown RBP24.54■■□□□ 1.52
CMTM4-201ENST00000330687 TMX1Q9H3N1 280 aa24.54■■□□□ 1.52
CMTM4-201ENST00000330687 TERF2IPQ9NYB0 399 aa24.54■■□□□ 1.52
CMTM4-201ENST00000330687 NUP62CLQ9H1M0 184 aa24.54■■□□□ 1.52
CMTM4-201ENST00000330687 EMILIN1Q9Y6C2 1016 aa24.54■■□□□ 1.52
CMTM4-201ENST00000330687 F13A1P00488 732 aa24.54■■□□□ 1.52
CMTM4-201ENST00000330687 SLC4A2P04920 1241 aa24.54■■□□□ 1.52
CMTM4-201ENST00000330687 NUTM1Q86Y26 1132 aa24.54■■□□□ 1.52
CMTM4-201ENST00000330687 TNMDQ9H2S6 317 aa24.54■■□□□ 1.52
CMTM4-201ENST00000330687 ZNF428Q96B54 188 aa24.53■■□□□ 1.52
CMTM4-201ENST00000330687 ATP6V1DQ9Y5K8 247 aa24.53■■□□□ 1.52
CMTM4-201ENST00000330687 MAP3K11Q16584 847 aa24.53■■□□□ 1.52
CMTM4-201ENST00000330687 NECAB1Q8N987 351 aa24.52■■□□□ 1.52
CMTM4-201ENST00000330687 ARHGAP31Q2M1Z3 1444 aa24.52■■□□□ 1.52
CMTM4-201ENST00000330687 TYRO3Q06418 890 aa24.52■■□□□ 1.52
CMTM4-201ENST00000330687 FAM200AQ8TCP9 573 aa24.52■■□□□ 1.52
CMTM4-201ENST00000330687 SPG7Q9UQ90 795 aa24.52■■□□□ 1.52
CMTM4-201ENST00000330687 AK2P54819 239 aa24.52■■□□□ 1.52
CMTM4-201ENST00000330687 MSH6P52701 1360 aa24.52■■□□□ 1.52
CMTM4-201ENST00000330687 CHMLP26374 656 aa24.51■■□□□ 1.51
CMTM4-201ENST00000330687 GJB2P29033 226 aa24.51■■□□□ 1.51
CMTM4-201ENST00000330687 A0A1W2PP64 1363 aa24.51■■□□□ 1.51
CMTM4-201ENST00000330687 USP27XA6NNY8 438 aa24.51■■□□□ 1.51
CMTM4-201ENST00000330687 ZSCAN25Q6NSZ9 544 aa24.51■■□□□ 1.51
CMTM4-201ENST00000330687 IL25Q9H293 177 aa24.51■■□□□ 1.51
CMTM4-201ENST00000330687 LIG1P18858 919 aa24.51■■□□□ 1.51
CMTM4-201ENST00000330687 PTPN14Q15678 1187 aa24.51■■□□□ 1.51
CMTM4-201ENST00000330687 CACTINQ8WUQ7 758 aaKnown RBP24.51■■□□□ 1.51
CMTM4-201ENST00000330687 DNAJC25Q9H1X3 360 aa24.51■■□□□ 1.51
CMTM4-201ENST00000330687 CEBPZQ03701 1054 aaKnown RBP24.5■■□□□ 1.51
CMTM4-201ENST00000330687 FBXO38Q6PIJ6 1188 aa24.5■■□□□ 1.51
CMTM4-201ENST00000330687 BICD2Q8TD16 824 aa24.5■■□□□ 1.51
CMTM4-201ENST00000330687 TRAPPC8Q9Y2L5 1435 aa24.5■■□□□ 1.51
CMTM4-201ENST00000330687 HDGFL2Q7Z4V5 671 aaPredicted RBP24.5■■□□□ 1.51
CMTM4-201ENST00000330687 NOL10Q9BSC4 688 aaKnown RBP24.5■■□□□ 1.51
CMTM4-201ENST00000330687 DACT1Q9NYF0 836 aa24.5■■□□□ 1.51
CMTM4-201ENST00000330687 CALCOCO1Q9P1Z2 691 aa24.5■■□□□ 1.51
CMTM4-201ENST00000330687 MCM10Q7L590 875 aa24.49■■□□□ 1.51
CMTM4-201ENST00000330687 CABP1Q9NZU7 370 aa24.49■■□□□ 1.51
CMTM4-201ENST00000330687 CASTP20810 708 aaKnown RBP24.49■■□□□ 1.51
CMTM4-201ENST00000330687 A0A087WWV3 80 aa24.49■■□□□ 1.51
CMTM4-201ENST00000330687 CBX8Q9HC52 389 aa24.49■■□□□ 1.51
CMTM4-201ENST00000330687 TCHHQ07283 1943 aa24.48■■□□□ 1.51
CMTM4-201ENST00000330687 FOSBP53539 338 aa24.48■■□□□ 1.51
CMTM4-201ENST00000330687 ZNF397Q8NF99 534 aaPredicted RBP24.48■■□□□ 1.51
CMTM4-201ENST00000330687 DNAJC2Q99543 621 aaKnown RBP24.48■■□□□ 1.51
CMTM4-201ENST00000330687 DUOX2Q9NRD8 1548 aa24.48■■□□□ 1.51
CMTM4-201ENST00000330687 CWC27Q6UX04 472 aaKnown RBP24.48■■□□□ 1.51
CMTM4-201ENST00000330687 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.48■■□□□ 1.51
CMTM4-201ENST00000330687 LRRCC1Q9C099 1032 aa24.48■■□□□ 1.51
CMTM4-201ENST00000330687 GOLGA6L19H0YKK7 550 aa24.47■■□□□ 1.51
CMTM4-201ENST00000330687 IQGAP3Q86VI3 1631 aa24.47■■□□□ 1.51
CMTM4-201ENST00000330687 LARGE1O95461 756 aa24.47■■□□□ 1.51
CMTM4-201ENST00000330687 TCEANC2Q96MN5 208 aa24.47■■□□□ 1.51
CMTM4-201ENST00000330687 UNC13BO14795 1591 aa24.47■■□□□ 1.51
CMTM4-201ENST00000330687 ZNF165P49910 485 aa24.47■■□□□ 1.51
CMTM4-201ENST00000330687 RRS1Q15050 365 aaKnown RBP24.47■■□□□ 1.51
CMTM4-201ENST00000330687 PAXBP1Q9Y5B6 917 aa24.47■■□□□ 1.51
CMTM4-201ENST00000330687 NEK11Q8NG66 645 aa24.46■■□□□ 1.51
CMTM4-201ENST00000330687 MORC2Q9Y6X9 1032 aaPredicted RBP24.46■■□□□ 1.51
CMTM4-201ENST00000330687 C14orf93Q9H972 538 aaKnown RBP24.45■■□□□ 1.51
CMTM4-201ENST00000330687 HNRNPH2P55795 449 aaKnown RBP24.45■■□□□ 1.5
CMTM4-201ENST00000330687 CCDC144BQ3MJ40 725 aa24.45■■□□□ 1.5
CMTM4-201ENST00000330687 CCDC144CPQ8IYA2 1237 aa24.45■■□□□ 1.5
CMTM4-201ENST00000330687 USP16Q9Y5T5 823 aa24.45■■□□□ 1.5
CMTM4-201ENST00000330687 MRVI1Q9Y6F6 885 aa24.44■■□□□ 1.5
CMTM4-201ENST00000330687 MED14O60244 1454 aa24.44■■□□□ 1.5
CMTM4-201ENST00000330687 CAPN2P17655 700 aa24.44■■□□□ 1.5
CMTM4-201ENST00000330687 LARP1BQ659C4 914 aaKnown RBP24.44■■□□□ 1.5
CMTM4-201ENST00000330687 SKILP12757 684 aa24.44■■□□□ 1.5
CMTM4-201ENST00000330687 ERCC6LQ2NKX8 1250 aa24.44■■□□□ 1.5
CMTM4-201ENST00000330687 LIMCH1Q9UPQ0 1083 aa24.44■■□□□ 1.5
CMTM4-201ENST00000330687 STK3Q13188 491 aa24.43■■□□□ 1.5
CMTM4-201ENST00000330687 RASEFQ8IZ41 740 aa24.43■■□□□ 1.5
CMTM4-201ENST00000330687 ABCA8O94911 1581 aa24.43■■□□□ 1.5
CMTM4-201ENST00000330687 RPAP1Q9BWH6 1393 aaPredicted RBP24.43■■□□□ 1.5
CMTM4-201ENST00000330687 G2E3Q7L622 706 aa24.43■■□□□ 1.5
CMTM4-201ENST00000330687 TAOK2Q9UL54 1235 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms