RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 DLG5Q8TDM6 1919 aa20.9■□□□□ 0.94
PRKCD-201ENST00000330452 BMP2KLQ5H9B9 411 aa20.9■□□□□ 0.94
PRKCD-201ENST00000330452 SULT6B1Q6IMI4 303 aa20.9■□□□□ 0.94
PRKCD-201ENST00000330452 HSCBQ8IWL3 235 aa20.9■□□□□ 0.94
PRKCD-201ENST00000330452 EIF4A2Q14240 407 aaKnown RBP20.89■□□□□ 0.93
PRKCD-201ENST00000330452 RBM25P49756 843 aaKnown RBP20.89■□□□□ 0.93
PRKCD-201ENST00000330452 SKOR2Q2VWA4 1001 aaPredicted RBP20.89■□□□□ 0.93
PRKCD-201ENST00000330452 ZNF692Q9BU19 519 aaPredicted RBP20.89■□□□□ 0.93
PRKCD-201ENST00000330452 TBX22Q9Y458 520 aa20.89■□□□□ 0.93
PRKCD-201ENST00000330452 RIMS1Q86UR5 1692 aaKnown RBP20.88■□□□□ 0.93
PRKCD-201ENST00000330452 MCM5P33992 734 aa20.88■□□□□ 0.93
PRKCD-201ENST00000330452 MYCNP04198 464 aaPredicted RBP20.87■□□□□ 0.93
PRKCD-201ENST00000330452 SIRT1Q96EB6 747 aa20.87■□□□□ 0.93
PRKCD-201ENST00000330452 API5Q9BZZ5 524 aaKnown RBP20.87■□□□□ 0.93
PRKCD-201ENST00000330452 ZBTB7CA1YPR0 619 aa20.87■□□□□ 0.93
PRKCD-201ENST00000330452 CHMP4CQ96CF2 233 aa20.87■□□□□ 0.93
PRKCD-201ENST00000330452 PDLIM2Q96JY6 352 aa20.87■□□□□ 0.93
PRKCD-201ENST00000330452 MON2Q7Z3U7 1717 aa20.87■□□□□ 0.93
PRKCD-201ENST00000330452 CLGNO14967 610 aa20.86■□□□□ 0.93
PRKCD-201ENST00000330452 ZBTB9Q96C00 473 aa20.86■□□□□ 0.93
PRKCD-201ENST00000330452 MCM10Q7L590 875 aa20.86■□□□□ 0.93
PRKCD-201ENST00000330452 RGPD8O14715 1765 aaPredicted RBP20.85■□□□□ 0.93
PRKCD-201ENST00000330452 CAPN2P17655 700 aa20.84■□□□□ 0.93
PRKCD-201ENST00000330452 TBC1D9Q6ZT07 1266 aa20.84■□□□□ 0.93
PRKCD-201ENST00000330452 LTV1Q96GA3 475 aaPredicted RBP20.84■□□□□ 0.93
PRKCD-201ENST00000330452 GTF2F1P35269 517 aaKnown RBP eCLIP20.84■□□□□ 0.93
PRKCD-201ENST00000330452 TRIM6-TRIM34B2RNG4 842 aa20.83■□□□□ 0.93
PRKCD-201ENST00000330452 TRIM34Q9BYJ4 488 aa20.83■□□□□ 0.93
PRKCD-201ENST00000330452 KIF2CQ99661 725 aa20.82■□□□□ 0.92
PRKCD-201ENST00000330452 AKAP12Q02952 1782 aa20.82■□□□□ 0.92
PRKCD-201ENST00000330452 ANKLE2Q86XL3 938 aa20.82■□□□□ 0.92
PRKCD-201ENST00000330452 ARHGAP23Q9P227 1491 aa20.82■□□□□ 0.92
PRKCD-201ENST00000330452 TULP2O00295 520 aa20.81■□□□□ 0.92
PRKCD-201ENST00000330452 NLRP6P59044 892 aa20.81■□□□□ 0.92
PRKCD-201ENST00000330452 TIGD1Q96MW7 591 aa20.81■□□□□ 0.92
PRKCD-201ENST00000330452 ITSN1Q15811 1721 aa20.81■□□□□ 0.92
PRKCD-201ENST00000330452 TNPO1Q92973 898 aaKnown RBP20.81■□□□□ 0.92
PRKCD-201ENST00000330452 KNDC1Q76NI1 1749 aa20.81■□□□□ 0.92
PRKCD-201ENST00000330452 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.81■□□□□ 0.92
PRKCD-201ENST00000330452 IBTKQ9P2D0 1353 aaPredicted RBP20.8■□□□□ 0.92
PRKCD-201ENST00000330452 USP6P35125 1406 aa20.8■□□□□ 0.92
PRKCD-201ENST00000330452 SLIT1O75093 1534 aa20.8■□□□□ 0.92
PRKCD-201ENST00000330452 PLEKHG3A1L390 1219 aa20.8■□□□□ 0.92
PRKCD-201ENST00000330452 FOXO3O43524 673 aa20.8■□□□□ 0.92
PRKCD-201ENST00000330452 SNX21Q969T3 373 aa20.8■□□□□ 0.92
PRKCD-201ENST00000330452 CCDC66A2RUB6 948 aa20.8■□□□□ 0.92
PRKCD-201ENST00000330452 CHL1O00533 1208 aa20.8■□□□□ 0.92
PRKCD-201ENST00000330452 CD2BP2O95400 341 aaKnown RBP20.8■□□□□ 0.92
PRKCD-201ENST00000330452 APPP05067 770 aa20.8■□□□□ 0.92
PRKCD-201ENST00000330452 PDCL2Q8N4E4 241 aa20.8■□□□□ 0.92
PRKCD-201ENST00000330452 PRIMPOLQ96LW4 560 aa20.8■□□□□ 0.92
PRKCD-201ENST00000330452 YY1AP1Q9H869 796 aa20.8■□□□□ 0.92
PRKCD-201ENST00000330452 RBM42Q9BTD8 480 aaKnown RBP20.79■□□□□ 0.92
PRKCD-201ENST00000330452 GSPT1P15170 499 aaKnown RBP20.79■□□□□ 0.92
PRKCD-201ENST00000330452 U2AF2P26368 475 aaKnown RBP eCLIP20.79■□□□□ 0.92
PRKCD-201ENST00000330452 C16orf71Q8IYS4 520 aaPredicted RBP20.79■□□□□ 0.92
PRKCD-201ENST00000330452 GEMIN8Q9NWZ8 242 aaKnown RBP20.79■□□□□ 0.92
PRKCD-201ENST00000330452 MIS18AQ9NYP9 233 aa20.79■□□□□ 0.92
PRKCD-201ENST00000330452 MAP3K19Q56UN5 1328 aa20.79■□□□□ 0.92
PRKCD-201ENST00000330452 INTS3Q68E01 1043 aaKnown RBP20.78■□□□□ 0.92
PRKCD-201ENST00000330452 GBP4Q96PP9 640 aa20.78■□□□□ 0.92
PRKCD-201ENST00000330452 CEP170BQ9Y4F5 1589 aaPredicted RBP20.78■□□□□ 0.92
PRKCD-201ENST00000330452 HSP90AB1P08238 724 aaKnown RBP20.78■□□□□ 0.92
PRKCD-201ENST00000330452 DDIT3P35638 169 aa20.78■□□□□ 0.92
PRKCD-201ENST00000330452 PLEKHM2Q8IWE5 1019 aa20.78■□□□□ 0.92
PRKCD-201ENST00000330452 FAM177BA6PVY3 158 aa20.77■□□□□ 0.92
PRKCD-201ENST00000330452 HMGN5P82970 282 aaKnown RBP20.77■□□□□ 0.92
PRKCD-201ENST00000330452 LMOD2Q6P5Q4 547 aa20.77■□□□□ 0.92
PRKCD-201ENST00000330452 HOMEZQ8IX15 550 aa20.77■□□□□ 0.92
PRKCD-201ENST00000330452 DCTPP1Q9H773 170 aa20.77■□□□□ 0.92
PRKCD-201ENST00000330452 FOXD4L1Q9NU39 408 aa20.77■□□□□ 0.92
PRKCD-201ENST00000330452 NCOA3Q9Y6Q9 1424 aa20.77■□□□□ 0.92
PRKCD-201ENST00000330452 ESCO1Q5FWF5 840 aa20.77■□□□□ 0.92
PRKCD-201ENST00000330452 ABTB2Q8N961 1025 aa20.77■□□□□ 0.92
PRKCD-201ENST00000330452 OVOS2A0A0J9YW53 1432 aa20.76■□□□□ 0.91
PRKCD-201ENST00000330452 OVOS2Q6IE36 1432 aa20.76■□□□□ 0.91
PRKCD-201ENST00000330452 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.76■□□□□ 0.91
PRKCD-201ENST00000330452 PTMSP20962 102 aa20.76■□□□□ 0.91
PRKCD-201ENST00000330452 GABPB1Q06547 395 aaPredicted RBP20.76■□□□□ 0.91
PRKCD-201ENST00000330452 CNKSR2Q8WXI2 1034 aa20.76■□□□□ 0.91
PRKCD-201ENST00000330452 RGS12O14924 1447 aa20.76■□□□□ 0.91
PRKCD-201ENST00000330452 NRKQ7Z2Y5 1582 aa20.75■□□□□ 0.91
PRKCD-201ENST00000330452 USHBP1Q8N6Y0 703 aa20.75■□□□□ 0.91
PRKCD-201ENST00000330452 BCL2L12Q9HB09 334 aa20.75■□□□□ 0.91
PRKCD-201ENST00000330452 APBB1O00213 710 aa20.75■□□□□ 0.91
PRKCD-201ENST00000330452 CDC45O75419 566 aa20.75■□□□□ 0.91
PRKCD-201ENST00000330452 OTUD7AQ8TE49 926 aaPredicted RBP20.75■□□□□ 0.91
PRKCD-201ENST00000330452 KIF3AQ9Y496 699 aa20.75■□□□□ 0.91
PRKCD-201ENST00000330452 SLFN14P0C7P3 912 aa20.74■□□□□ 0.91
PRKCD-201ENST00000330452 AMPHP49418 695 aa20.74■□□□□ 0.91
PRKCD-201ENST00000330452 DIP2AQ14689 1571 aa20.74■□□□□ 0.91
PRKCD-201ENST00000330452 ORAI2Q96SN7 254 aa20.74■□□□□ 0.91
PRKCD-201ENST00000330452 DNAJC5Q9H3Z4 198 aa20.74■□□□□ 0.91
PRKCD-201ENST00000330452 KIF24Q5T7B8 1368 aa20.74■□□□□ 0.91
PRKCD-201ENST00000330452 ANKRD44Q8N8A2 993 aa20.74■□□□□ 0.91
PRKCD-201ENST00000330452 MEIS3Q99687 375 aa20.73■□□□□ 0.91
PRKCD-201ENST00000330452 PEAK1Q9H792 1746 aa20.73■□□□□ 0.91
PRKCD-201ENST00000330452 CCDC39Q9UFE4 941 aa20.73■□□□□ 0.91
PRKCD-201ENST00000330452 MSH6P52701 1360 aa20.73■□□□□ 0.91
PRKCD-201ENST00000330452 SLC4A2P04920 1241 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms