RNA–Protein interactions for RNA: ENST00000330115.3

TMEM44-201, Transcript of transmembrane protein 44, humanhuman

TSL 1 (best) BASIC

Gene TMEM44, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM44-201ENST00000330115 DDX54Q8TDD1 881 aaKnown RBP22.06■■□□□ 1.12
TMEM44-201ENST00000330115 GNAT3A8MTJ3 354 aa22.05■■□□□ 1.12
TMEM44-201ENST00000330115 HTATSF1O43719 755 aaKnown RBP22.05■■□□□ 1.12
TMEM44-201ENST00000330115 LMOD3Q0VAK6 560 aa22.05■■□□□ 1.12
TMEM44-201ENST00000330115 CCDC27Q2M243 656 aa22.05■■□□□ 1.12
TMEM44-201ENST00000330115 AKAP4Q5JQC9 854 aa22.05■■□□□ 1.12
TMEM44-201ENST00000330115 LY75O60449 1722 aa22.05■■□□□ 1.12
TMEM44-201ENST00000330115 IFNL2Q8IZJ0 200 aa22.04■■□□□ 1.12
TMEM44-201ENST00000330115 RTF1Q92541 710 aaKnown RBP22.03■■□□□ 1.12
TMEM44-201ENST00000330115 TRIM35Q9UPQ4 493 aa22.03■■□□□ 1.12
TMEM44-201ENST00000330115 PCDH11XQ9BZA7 1347 aa22.03■■□□□ 1.12
TMEM44-201ENST00000330115 PCDH11YQ9BZA8 1340 aa22.03■■□□□ 1.12
TMEM44-201ENST00000330115 QSER1Q2KHR3 1735 aa22.03■■□□□ 1.12
TMEM44-201ENST00000330115 SGIP1Q9BQI5 828 aa22.02■■□□□ 1.12
TMEM44-201ENST00000330115 MAP3K5Q99683 1374 aa22.01■■□□□ 1.11
TMEM44-201ENST00000330115 CYP27B1O15528 508 aa22.01■■□□□ 1.11
TMEM44-201ENST00000330115 PHKG2P15735 406 aa22.01■■□□□ 1.11
TMEM44-201ENST00000330115 WWC1Q8IX03 1113 aa22.01■■□□□ 1.11
TMEM44-201ENST00000330115 ZBED9Q6R2W3 1325 aa22.01■■□□□ 1.11
TMEM44-201ENST00000330115 HSP90AB1P08238 724 aaKnown RBP22■■□□□ 1.11
TMEM44-201ENST00000330115 KCNQ4P56696 695 aa22■■□□□ 1.11
TMEM44-201ENST00000330115 SCN11AQ9UI33 1791 aa21.99■■□□□ 1.11
TMEM44-201ENST00000330115 PRIM1P49642 420 aaKnown RBP21.98■■□□□ 1.11
TMEM44-201ENST00000330115 WDR63Q8IWG1 891 aa21.98■■□□□ 1.11
TMEM44-201ENST00000330115 MTFR1LQ9H019 292 aa21.98■■□□□ 1.11
TMEM44-201ENST00000330115 COL24A1Q17RW2 1714 aa21.97■■□□□ 1.11
TMEM44-201ENST00000330115 TOGARAM1Q9Y4F4 1720 aa21.97■■□□□ 1.11
TMEM44-201ENST00000330115 NKX1-1Q15270 411 aaPredicted RBP21.97■■□□□ 1.11
TMEM44-201ENST00000330115 AKT1S1Q96B36 256 aa21.97■■□□□ 1.11
TMEM44-201ENST00000330115 RNMTO43148 476 aaKnown RBP21.96■■□□□ 1.11
TMEM44-201ENST00000330115 YY1P25490 414 aa21.96■■□□□ 1.11
TMEM44-201ENST00000330115 CALD1Q05682 793 aaKnown RBP21.96■■□□□ 1.11
TMEM44-201ENST00000330115 DCTN1Q14203 1278 aa21.96■■□□□ 1.11
TMEM44-201ENST00000330115 MPRIPQ6WCQ1 1025 aa21.96■■□□□ 1.11
TMEM44-201ENST00000330115 MCM10Q7L590 875 aa21.96■■□□□ 1.11
TMEM44-201ENST00000330115 IL17REQ8NFR9 667 aa21.96■■□□□ 1.11
TMEM44-201ENST00000330115 SYTL4Q96C24 671 aaPredicted RBP21.96■■□□□ 1.11
TMEM44-201ENST00000330115 DCAF5Q96JK2 942 aa21.96■■□□□ 1.11
TMEM44-201ENST00000330115 FHDC1Q9C0D6 1143 aaPredicted RBP21.96■■□□□ 1.11
TMEM44-201ENST00000330115 ZNF521Q96K83 1311 aa21.96■■□□□ 1.11
TMEM44-201ENST00000330115 LGR6Q9HBX8 967 aa21.95■■□□□ 1.1
TMEM44-201ENST00000330115 ADAMTS7Q9UKP4 1686 aa21.95■■□□□ 1.1
TMEM44-201ENST00000330115 GOLGA2Q08379 1002 aa21.94■■□□□ 1.1
TMEM44-201ENST00000330115 PNPLA7Q6ZV29 1317 aa21.93■■□□□ 1.1
TMEM44-201ENST00000330115 SYT17Q9BSW7 474 aa21.93■■□□□ 1.1
TMEM44-201ENST00000330115 IL16Q14005 1332 aa21.92■■□□□ 1.1
TMEM44-201ENST00000330115 THUMPD2Q9BTF0 503 aaKnown RBP21.92■■□□□ 1.1
TMEM44-201ENST00000330115 CEMIPQ8WUJ3 1361 aa21.91■■□□□ 1.1
TMEM44-201ENST00000330115 UTRNP46939 3433 aa21.91■■□□□ 1.1
TMEM44-201ENST00000330115 TEFQ10587 303 aa21.91■■□□□ 1.1
TMEM44-201ENST00000330115 SLC27A3Q5K4L6 730 aa21.91■■□□□ 1.1
TMEM44-201ENST00000330115 ITGB4P16144 1822 aa21.9■■□□□ 1.1
TMEM44-201ENST00000330115 ERVV-2B6SEH9 535 aa21.9■■□□□ 1.1
TMEM44-201ENST00000330115 C5P01031 1676 aa21.9■■□□□ 1.1
TMEM44-201ENST00000330115 SIPA1L3O60292 1781 aaPredicted RBP21.89■■□□□ 1.1
TMEM44-201ENST00000330115 TAF7Q15545 349 aaPredicted RBP21.89■■□□□ 1.09
TMEM44-201ENST00000330115 KDM6AO15550 1401 aaPredicted RBP21.89■■□□□ 1.09
TMEM44-201ENST00000330115 TAF1LQ8IZX4 1826 aa21.88■■□□□ 1.09
TMEM44-201ENST00000330115 GNAI1P63096 354 aa21.88■■□□□ 1.09
TMEM44-201ENST00000330115 ARXQ96QS3 562 aa21.88■■□□□ 1.09
TMEM44-201ENST00000330115 E9PSI1 815 aa21.87■■□□□ 1.09
TMEM44-201ENST00000330115 CABP4P57796 275 aa21.87■■□□□ 1.09
TMEM44-201ENST00000330115 SLFN5Q08AF3 891 aa21.87■■□□□ 1.09
TMEM44-201ENST00000330115 IFT57Q9NWB7 429 aa21.87■■□□□ 1.09
TMEM44-201ENST00000330115 LAS1LQ9Y4W2 734 aaKnown RBP21.87■■□□□ 1.09
TMEM44-201ENST00000330115 CDCA7LQ96GN5 454 aa21.86■■□□□ 1.09
TMEM44-201ENST00000330115 CFAP44Q96MT7 982 aa21.86■■□□□ 1.09
TMEM44-201ENST00000330115 SLC52A2Q9HAB3 445 aa21.86■■□□□ 1.09
TMEM44-201ENST00000330115 BABAM1Q9NWV8 329 aa21.86■■□□□ 1.09
TMEM44-201ENST00000330115 ZNF853P0CG23 659 aa21.85■■□□□ 1.09
TMEM44-201ENST00000330115 NFATC2IPQ8NCF5 419 aa21.85■■□□□ 1.09
TMEM44-201ENST00000330115 MYH16Q9H6N6 1097 aa21.85■■□□□ 1.09
TMEM44-201ENST00000330115 CCNL1Q9UK58 526 aaPredicted RBP21.85■■□□□ 1.09
TMEM44-201ENST00000330115 TRMT2AQ8IZ69 625 aaKnown RBP21.84■■□□□ 1.09
TMEM44-201ENST00000330115 SPINK5Q9NQ38 1064 aaPredicted RBP21.84■■□□□ 1.09
TMEM44-201ENST00000330115 TFCP2L1Q9NZI6 479 aa21.84■■□□□ 1.09
TMEM44-201ENST00000330115 DCAF8L1A6NGE4 600 aa21.83■■□□□ 1.09
TMEM44-201ENST00000330115 CHL1O00533 1208 aa21.83■■□□□ 1.09
TMEM44-201ENST00000330115 MRC1P22897 1456 aa21.83■■□□□ 1.08
TMEM44-201ENST00000330115 HMGB2P26583 209 aaKnown RBP21.82■■□□□ 1.08
TMEM44-201ENST00000330115 CHD4Q14839 1912 aa21.81■■□□□ 1.08
TMEM44-201ENST00000330115 BTBD11A6QL63 1104 aa21.81■■□□□ 1.08
TMEM44-201ENST00000330115 TMOD3Q9NYL9 352 aa21.81■■□□□ 1.08
TMEM44-201ENST00000330115 TSPYL4Q9UJ04 414 aa21.81■■□□□ 1.08
TMEM44-201ENST00000330115 KDM3BQ7LBC6 1761 aa21.8■■□□□ 1.08
TMEM44-201ENST00000330115 PALLDQ8WX93 1383 aa21.8■■□□□ 1.08
TMEM44-201ENST00000330115 SLC16A10Q8TF71 515 aa21.8■■□□□ 1.08
TMEM44-201ENST00000330115 MIS18AQ9NYP9 233 aa21.8■■□□□ 1.08
TMEM44-201ENST00000330115 DUSP27Q5VZP5 1158 aa21.79■■□□□ 1.08
TMEM44-201ENST00000330115 COL23A1Q86Y22 540 aaPredicted RBP21.79■■□□□ 1.08
TMEM44-201ENST00000330115 MBIPQ9NS73 344 aa21.79■■□□□ 1.08
TMEM44-201ENST00000330115 C4BP0C0L5 1744 aa21.79■■□□□ 1.08
TMEM44-201ENST00000330115 KLHL34Q8N239 644 aa21.78■■□□□ 1.08
TMEM44-201ENST00000330115 TSR2Q969E8 191 aaKnown RBP21.78■■□□□ 1.08
TMEM44-201ENST00000330115 AMIGO3Q86WK7 504 aa21.77■■□□□ 1.08
TMEM44-201ENST00000330115 NLGN2Q8NFZ4 835 aa21.77■■□□□ 1.08
TMEM44-201ENST00000330115 PIGBQ92521 554 aa21.77■■□□□ 1.08
TMEM44-201ENST00000330115 UBR3Q6ZT12 1888 aa21.77■■□□□ 1.08
TMEM44-201ENST00000330115 FANCIQ9NVI1 1328 aa21.77■■□□□ 1.07
TMEM44-201ENST00000330115 MSL1Q68DK7 614 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms