RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 GOLGA6L10A0A0M3HER8 536 aa16.54■□□□□ 0.24
FNDC1-202ENST00000329629 JAKMIP3Q5VZ66 844 aa16.54■□□□□ 0.24
FNDC1-202ENST00000329629 FKBP4Q02790 459 aaKnown RBP eCLIP16.53■□□□□ 0.24
FNDC1-202ENST00000329629 TMX1Q9H3N1 280 aa16.53■□□□□ 0.24
FNDC1-202ENST00000329629 CCT4P50991 539 aaKnown RBP16.53■□□□□ 0.24
FNDC1-202ENST00000329629 DDX11Q96FC9 970 aa16.53■□□□□ 0.24
FNDC1-202ENST00000329629 CEBPAP49715 358 aaPredicted RBP16.53■□□□□ 0.24
FNDC1-202ENST00000329629 MVPQ14764 893 aaKnown RBP16.53■□□□□ 0.24
FNDC1-202ENST00000329629 PTPN14Q15678 1187 aa16.53■□□□□ 0.24
FNDC1-202ENST00000329629 CCDC57Q2TAC2 916 aa16.53■□□□□ 0.24
FNDC1-202ENST00000329629 GNL3LQ9NVN8 582 aaKnown RBP16.53■□□□□ 0.24
FNDC1-202ENST00000329629 MYL6BP14649 208 aa16.53■□□□□ 0.24
FNDC1-202ENST00000329629 DENND4BO75064 1496 aaPredicted RBP16.52■□□□□ 0.24
FNDC1-202ENST00000329629 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.52■□□□□ 0.24
FNDC1-202ENST00000329629 ZSCAN31Q96LW9 406 aaPredicted RBP16.52■□□□□ 0.23
FNDC1-202ENST00000329629 POLR3GO15318 223 aaPredicted RBP16.52■□□□□ 0.23
FNDC1-202ENST00000329629 DMRT2Q9Y5R5 561 aa16.52■□□□□ 0.23
FNDC1-202ENST00000329629 URB2Q14146 1524 aaKnown RBP16.52■□□□□ 0.23
FNDC1-202ENST00000329629 WAPLQ7Z5K2 1190 aa16.51■□□□□ 0.23
FNDC1-202ENST00000329629 CASTP20810 708 aaKnown RBP16.51■□□□□ 0.23
FNDC1-202ENST00000329629 CCDC61Q9Y6R9 512 aa16.51■□□□□ 0.23
FNDC1-202ENST00000329629 PPP6R1Q9UPN7 881 aa16.51■□□□□ 0.23
FNDC1-202ENST00000329629 CDKL5O76039 1030 aa16.51■□□□□ 0.23
FNDC1-202ENST00000329629 PRKCSHP14314 528 aaPredicted RBP16.51■□□□□ 0.23
FNDC1-202ENST00000329629 MATR3P43243 847 aaKnown RBP eCLIP16.51■□□□□ 0.23
FNDC1-202ENST00000329629 CIZ1Q9ULV3 898 aaPredicted RBP16.51■□□□□ 0.23
FNDC1-202ENST00000329629 PCF11O94913 1555 aaKnown RBP16.51■□□□□ 0.23
FNDC1-202ENST00000329629 BTBD11A6QL63 1104 aa16.51■□□□□ 0.23
FNDC1-202ENST00000329629 HMGB2P26583 209 aaKnown RBP16.51■□□□□ 0.23
FNDC1-202ENST00000329629 NBPF8Q3BBV2 869 aa16.51■□□□□ 0.23
FNDC1-202ENST00000329629 SPINK5Q9NQ38 1064 aaPredicted RBP16.5■□□□□ 0.23
FNDC1-202ENST00000329629 IL1RAPL2Q9NP60 686 aa16.5■□□□□ 0.23
FNDC1-202ENST00000329629 URI1O94763 535 aaPredicted RBP16.49■□□□□ 0.23
FNDC1-202ENST00000329629 ATF7IPQ6VMQ6 1270 aa16.49■□□□□ 0.23
FNDC1-202ENST00000329629 ZNF397Q8NF99 534 aaPredicted RBP16.49■□□□□ 0.23
FNDC1-202ENST00000329629 FBXO31Q5XUX0 539 aaPredicted RBP16.49■□□□□ 0.23
FNDC1-202ENST00000329629 SRCIN1Q9C0H9 1055 aa16.49■□□□□ 0.23
FNDC1-202ENST00000329629 GBP3Q9H0R5 595 aa16.49■□□□□ 0.23
FNDC1-202ENST00000329629 BMP2KQ9NSY1 1161 aaPredicted RBP16.49■□□□□ 0.23
FNDC1-202ENST00000329629 ADAMTS2O95450 1211 aa16.49■□□□□ 0.23
FNDC1-202ENST00000329629 ZNF608Q9ULD9 1512 aaPredicted RBP16.49■□□□□ 0.23
FNDC1-202ENST00000329629 RNF187Q5TA31 235 aaPredicted RBP16.49■□□□□ 0.23
FNDC1-202ENST00000329629 FERMT3Q86UX7 667 aa16.49■□□□□ 0.23
FNDC1-202ENST00000329629 AMOTL2Q9Y2J4 779 aa16.48■□□□□ 0.23
FNDC1-202ENST00000329629 CCDC83Q8IWF9 413 aa16.48■□□□□ 0.23
FNDC1-202ENST00000329629 GOPCQ9HD26 462 aa16.48■□□□□ 0.23
FNDC1-202ENST00000329629 BCCIPQ9P287 314 aaKnown RBP eCLIP16.48■□□□□ 0.23
FNDC1-202ENST00000329629 CCDC91Q7Z6B0 441 aa16.48■□□□□ 0.23
FNDC1-202ENST00000329629 NEBLO76041 1014 aa16.48■□□□□ 0.23
FNDC1-202ENST00000329629 SFPQP23246 707 aaKnown RBP eCLIP16.48■□□□□ 0.23
FNDC1-202ENST00000329629 TDO2P48775 406 aa16.48■□□□□ 0.23
FNDC1-202ENST00000329629 NUTM1Q86Y26 1132 aa16.47■□□□□ 0.23
FNDC1-202ENST00000329629 UBAC1Q9BSL1 405 aa16.47■□□□□ 0.23
FNDC1-202ENST00000329629 FANCAO15360 1455 aa16.47■□□□□ 0.23
FNDC1-202ENST00000329629 SPA17Q15506 151 aa16.47■□□□□ 0.23
FNDC1-202ENST00000329629 RAI14Q9P0K7 980 aa16.47■□□□□ 0.23
FNDC1-202ENST00000329629 CGNQ9P2M7 1197 aaKnown RBP16.47■□□□□ 0.23
FNDC1-202ENST00000329629 DNA2P51530 1060 aa16.47■□□□□ 0.23
FNDC1-202ENST00000329629 ZSCAN25Q6NSZ9 544 aa16.47■□□□□ 0.23
FNDC1-202ENST00000329629 GPATCH11Q8N954 259 aa16.47■□□□□ 0.23
FNDC1-202ENST00000329629 ZSCAN12O43309 604 aa16.47■□□□□ 0.23
FNDC1-202ENST00000329629 KIF5CO60282 957 aa16.47■□□□□ 0.23
FNDC1-202ENST00000329629 CCDC178Q5BJE1 867 aa16.47■□□□□ 0.23
FNDC1-202ENST00000329629 SRGAP3O43295 1099 aa16.46■□□□□ 0.23
FNDC1-202ENST00000329629 KIF18AQ8NI77 898 aa16.46■□□□□ 0.23
FNDC1-202ENST00000329629 MPHOSPH8Q99549 860 aa16.46■□□□□ 0.23
FNDC1-202ENST00000329629 CLIP2Q9UDT6 1046 aa16.46■□□□□ 0.23
FNDC1-202ENST00000329629 BICDL1Q6ZP65 573 aa16.46■□□□□ 0.23
FNDC1-202ENST00000329629 KIF4BQ2VIQ3 1234 aa16.46■□□□□ 0.23
FNDC1-202ENST00000329629 KLHL10Q6JEL2 608 aa16.46■□□□□ 0.23
FNDC1-202ENST00000329629 TRMT1Q9NXH9 659 aaKnown RBP16.46■□□□□ 0.23
FNDC1-202ENST00000329629 MAP9Q49MG5 647 aa16.45■□□□□ 0.22
FNDC1-202ENST00000329629 ZNF76P36508 570 aa16.45■□□□□ 0.22
FNDC1-202ENST00000329629 PHF8Q9UPP1 1060 aa16.45■□□□□ 0.22
FNDC1-202ENST00000329629 GTF2F1P35269 517 aaKnown RBP eCLIP16.45■□□□□ 0.22
FNDC1-202ENST00000329629 CCDC183Q5T5S1 534 aa16.45■□□□□ 0.22
FNDC1-202ENST00000329629 KIF2AO00139 706 aaPredicted RBP16.44■□□□□ 0.22
FNDC1-202ENST00000329629 IFFO1Q0D2I5 559 aa16.44■□□□□ 0.22
FNDC1-202ENST00000329629 NSD3Q9BZ95 1437 aa16.44■□□□□ 0.22
FNDC1-202ENST00000329629 PTPN23Q9H3S7 1636 aa16.44■□□□□ 0.22
FNDC1-202ENST00000329629 NF2P35240 595 aa16.44■□□□□ 0.22
FNDC1-202ENST00000329629 USP5P45974 858 aa16.44■□□□□ 0.22
FNDC1-202ENST00000329629 STARD3NLO95772 234 aa16.44■□□□□ 0.22
FNDC1-202ENST00000329629 RBM5P52756 815 aaKnown RBP eCLIP16.44■□□□□ 0.22
FNDC1-202ENST00000329629 CEP131Q9UPN4 1083 aa16.44■□□□□ 0.22
FNDC1-202ENST00000329629 GNAT3A8MTJ3 354 aa16.44■□□□□ 0.22
FNDC1-202ENST00000329629 TNNT1P13805 278 aa16.44■□□□□ 0.22
FNDC1-202ENST00000329629 FAM135AQ9P2D6 1515 aa16.43■□□□□ 0.22
FNDC1-202ENST00000329629 WASF1Q92558 559 aa16.43■□□□□ 0.22
FNDC1-202ENST00000329629 NGLY1Q96IV0 654 aa16.43■□□□□ 0.22
FNDC1-202ENST00000329629 TMOD3Q9NYL9 352 aa16.43■□□□□ 0.22
FNDC1-202ENST00000329629 TOP1P11387 765 aaKnown RBP16.43■□□□□ 0.22
FNDC1-202ENST00000329629 KRT32Q14532 448 aa16.43■□□□□ 0.22
FNDC1-202ENST00000329629 LRPPRCP42704 1394 aaKnown RBP16.43■□□□□ 0.22
FNDC1-202ENST00000329629 CTNNA3Q9UI47 895 aa16.43■□□□□ 0.22
FNDC1-202ENST00000329629 ZHX1Q9UKY1 873 aaPredicted RBP16.43■□□□□ 0.22
FNDC1-202ENST00000329629 RBM25P49756 843 aaKnown RBP16.43■□□□□ 0.22
FNDC1-202ENST00000329629 LUZP1Q86V48 1076 aa16.43■□□□□ 0.22
FNDC1-202ENST00000329629 WDR63Q8IWG1 891 aa16.43■□□□□ 0.22
FNDC1-202ENST00000329629 CCDC97Q96F63 343 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms