RNA–Protein interactions for RNA: ENST00000327443.8

SP1-201, Transcript of Sp1 transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SP1, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-201ENST00000327443 CEP83Q9Y592 693 aa12.01□□□□□ -0.49
SP1-201ENST00000327443 UPF2Q9HAU5 1272 aaKnown RBP12.01□□□□□ -0.49
SP1-201ENST00000327443 RSPH14Q9UHP6 348 aa12.01□□□□□ -0.49
SP1-201ENST00000327443 CLSTN1O94985 981 aa12□□□□□ -0.49
SP1-201ENST00000327443 WDR43Q15061 677 aaKnown RBP eCLIP12□□□□□ -0.49
SP1-201ENST00000327443 CENPQQ7L2Z9 268 aaPredicted RBP12□□□□□ -0.49
SP1-201ENST00000327443 BCL2L12Q9HB09 334 aa12□□□□□ -0.49
SP1-201ENST00000327443 SMC4Q9NTJ3 1288 aa12□□□□□ -0.49
SP1-201ENST00000327443 SLIT3O75094 1523 aa12□□□□□ -0.49
SP1-201ENST00000327443 TTC21BQ7Z4L5 1316 aa12□□□□□ -0.49
SP1-201ENST00000327443 GOLIM4O00461 696 aa11.99□□□□□ -0.49
SP1-201ENST00000327443 GPATCH11Q8N954 259 aa11.99□□□□□ -0.49
SP1-201ENST00000327443 RNF217Q8TC41 542 aa11.99□□□□□ -0.49
SP1-201ENST00000327443 NCKAP5LQ9HCH0 1330 aa11.99□□□□□ -0.49
SP1-201ENST00000327443 BRPF1P55201 1214 aaPredicted RBP11.99□□□□□ -0.49
SP1-201ENST00000327443 ACEP12821 1306 aa11.99□□□□□ -0.49
SP1-201ENST00000327443 MED1Q15648 1581 aaPredicted RBP11.98□□□□□ -0.49
SP1-201ENST00000327443 ALS2Q96Q42 1657 aa11.98□□□□□ -0.49
SP1-201ENST00000327443 CDCA7LQ96GN5 454 aa11.98□□□□□ -0.49
SP1-201ENST00000327443 NCAPGQ9BPX3 1015 aa11.98□□□□□ -0.49
SP1-201ENST00000327443 ZNF521Q96K83 1311 aa11.98□□□□□ -0.49
SP1-201ENST00000327443 CCDC27Q2M243 656 aa11.98□□□□□ -0.49
SP1-201ENST00000327443 HSP90AB3PQ58FF7 597 aa11.98□□□□□ -0.49
SP1-201ENST00000327443 RTL1A6NKG5 1358 aa11.98□□□□□ -0.49
SP1-201ENST00000327443 CCDC172P0C7W6 258 aa11.97□□□□□ -0.49
SP1-201ENST00000327443 TNNT1P13805 278 aa11.97□□□□□ -0.49
SP1-201ENST00000327443 NOP2P46087 812 aaKnown RBP11.97□□□□□ -0.49
SP1-201ENST00000327443 SATB1Q01826 763 aa11.97□□□□□ -0.49
SP1-201ENST00000327443 TOMM22Q9NS69 142 aa11.97□□□□□ -0.49
SP1-201ENST00000327443 OGFRQ9NZT2 677 aa11.97□□□□□ -0.49
SP1-201ENST00000327443 PLEKHG2Q9H7P9 1386 aa11.97□□□□□ -0.49
SP1-201ENST00000327443 C1orf167Q5SNV9 1468 aa11.96□□□□□ -0.49
SP1-201ENST00000327443 GTF2F1P35269 517 aaKnown RBP eCLIP11.96□□□□□ -0.49
SP1-201ENST00000327443 NBPF20Q3BBV1 942 aa11.96□□□□□ -0.49
SP1-201ENST00000327443 CEP120Q8N960 986 aa11.96□□□□□ -0.49
SP1-201ENST00000327443 PRIMPOLQ96LW4 560 aa11.96□□□□□ -0.49
SP1-201ENST00000327443 FEZ1Q99689 392 aa11.96□□□□□ -0.49
SP1-201ENST00000327443 PHF23Q9BUL5 403 aaPredicted RBP11.96□□□□□ -0.49
SP1-201ENST00000327443 DMRT2Q9Y5R5 561 aa11.96□□□□□ -0.49
SP1-201ENST00000327443 DHX16O60231 1041 aaKnown RBP11.96□□□□□ -0.5
SP1-201ENST00000327443 ZNF526Q8TF50 670 aaPredicted RBP11.96□□□□□ -0.5
SP1-201ENST00000327443 COG3Q96JB2 828 aa11.96□□□□□ -0.5
SP1-201ENST00000327443 C19orf44Q9H6X5 657 aa11.96□□□□□ -0.5
SP1-201ENST00000327443 MCM5P33992 734 aa11.95□□□□□ -0.5
SP1-201ENST00000327443 HMGN5P82970 282 aaKnown RBP11.95□□□□□ -0.5
SP1-201ENST00000327443 TERF2Q15554 542 aa11.95□□□□□ -0.5
SP1-201ENST00000327443 PEAK1Q9H792 1746 aa11.95□□□□□ -0.5
SP1-201ENST00000327443 MTHFSP49914 203 aa11.95□□□□□ -0.5
SP1-201ENST00000327443 ADAMTS8Q9UP79 889 aa11.95□□□□□ -0.5
SP1-201ENST00000327443 NFAT5O94916 1531 aa11.95□□□□□ -0.5
SP1-201ENST00000327443 CAMTA1Q9Y6Y1 1673 aa11.95□□□□□ -0.5
SP1-201ENST00000327443 CRYBG1Q9Y4K1 1723 aa11.94□□□□□ -0.5
SP1-201ENST00000327443 SBNO1A3KN83 1393 aa11.94□□□□□ -0.5
SP1-201ENST00000327443 DNAJC21Q5F1R6 531 aaKnown RBP11.94□□□□□ -0.5
SP1-201ENST00000327443 RUNDC1Q96C34 613 aa11.94□□□□□ -0.5
SP1-201ENST00000327443 MAP2K1Q02750 393 aaPredicted RBP11.93□□□□□ -0.5
SP1-201ENST00000327443 PDLIM2Q96JY6 352 aa11.93□□□□□ -0.5
SP1-201ENST00000327443 MFAP1P55081 439 aaKnown RBP11.92□□□□□ -0.5
SP1-201ENST00000327443 PHF8Q9UPP1 1060 aa11.92□□□□□ -0.5
SP1-201ENST00000327443 ICE2Q659A1 982 aa11.92□□□□□ -0.5
SP1-201ENST00000327443 GGNBP2Q9H3C7 697 aa11.92□□□□□ -0.5
SP1-201ENST00000327443 POLKQ9UBT6 870 aa11.92□□□□□ -0.5
SP1-201ENST00000327443 GYS2P54840 703 aa11.92□□□□□ -0.5
SP1-201ENST00000327443 RAD51AP2Q09MP3 1159 aa11.92□□□□□ -0.5
SP1-201ENST00000327443 SKOR2Q2VWA4 1001 aaPredicted RBP11.92□□□□□ -0.5
SP1-201ENST00000327443 TRMT2AQ8IZ69 625 aaKnown RBP11.92□□□□□ -0.5
SP1-201ENST00000327443 SGSM3Q96HU1 749 aa11.92□□□□□ -0.5
SP1-201ENST00000327443 SPINK5Q9NQ38 1064 aaPredicted RBP11.92□□□□□ -0.5
SP1-201ENST00000327443 FAM208AQ9UK61 1670 aaKnown RBP11.91□□□□□ -0.5
SP1-201ENST00000327443 TMEM94Q12767 1356 aa11.91□□□□□ -0.5
SP1-201ENST00000327443 KIAA2012Q0VF49 1180 aa11.91□□□□□ -0.5
SP1-201ENST00000327443 NHSL1Q5SYE7 1610 aa11.91□□□□□ -0.5
SP1-201ENST00000327443 ARHGEF10O15013 1369 aa11.91□□□□□ -0.5
SP1-201ENST00000327443 FCHSD2O94868 740 aa11.9□□□□□ -0.5
SP1-201ENST00000327443 RBM25P49756 843 aaKnown RBP11.9□□□□□ -0.5
SP1-201ENST00000327443 HNRNPH2P55795 449 aaKnown RBP11.9□□□□□ -0.5
SP1-201ENST00000327443 IL16Q14005 1332 aa11.9□□□□□ -0.5
SP1-201ENST00000327443 MSH6P52701 1360 aa11.9□□□□□ -0.5
SP1-201ENST00000327443 LTN1O94822 1766 aa11.9□□□□□ -0.5
SP1-201ENST00000327443 DIAPH1O60610 1272 aaKnown RBP11.9□□□□□ -0.5
SP1-201ENST00000327443 CADPS2Q86UW7 1296 aa11.9□□□□□ -0.5
SP1-201ENST00000327443 PROSER2Q86WR7 435 aaPredicted RBP11.9□□□□□ -0.5
SP1-201ENST00000327443 NME9Q86XW9 330 aa11.9□□□□□ -0.5
SP1-201ENST00000327443 WDR63Q8IWG1 891 aa11.9□□□□□ -0.5
SP1-201ENST00000327443 CCDC39Q9UFE4 941 aa11.9□□□□□ -0.5
SP1-201ENST00000327443 ZBTB12Q9Y330 459 aaPredicted RBP11.9□□□□□ -0.5
SP1-201ENST00000327443 NCAPD2Q15021 1401 aa11.9□□□□□ -0.51
SP1-201ENST00000327443 FLT4P35916 1363 aa11.89□□□□□ -0.51
SP1-201ENST00000327443 TNPO1Q92973 898 aaKnown RBP11.89□□□□□ -0.51
SP1-201ENST00000327443 NGDNQ8NEJ9 315 aaKnown RBP11.89□□□□□ -0.51
SP1-201ENST00000327443 ANKRD7Q92527 254 aa11.89□□□□□ -0.51
SP1-201ENST00000327443 RASSF4Q9H2L5 321 aa11.89□□□□□ -0.51
SP1-201ENST00000327443 SENP3Q9H4L4 574 aaPredicted RBP11.89□□□□□ -0.51
SP1-201ENST00000327443 PXDNQ92626 1479 aa11.89□□□□□ -0.51
SP1-201ENST00000327443 PLEKHF1Q96S99 279 aa11.88□□□□□ -0.51
SP1-201ENST00000327443 LMO7Q8WWI1 1683 aa11.88□□□□□ -0.51
SP1-201ENST00000327443 GUCY2CP25092 1073 aa11.88□□□□□ -0.51
SP1-201ENST00000327443 IL13P35225 146 aa11.88□□□□□ -0.51
SP1-201ENST00000327443 RBSNQ9H1K0 784 aa11.88□□□□□ -0.51
SP1-201ENST00000327443 TBC1D32Q96NH3 1257 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms