RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 GNAI3P08754 354 aa26.56■■□□□ 1.84
LIMS2-201ENST00000324938 OTUD7AQ8TE49 926 aaPredicted RBP26.56■■□□□ 1.84
LIMS2-201ENST00000324938 NECTIN2Q92692 538 aa26.56■■□□□ 1.84
LIMS2-201ENST00000324938 TUBGCP6Q96RT7 1819 aa26.55■■□□□ 1.84
LIMS2-201ENST00000324938 GCP02774 474 aa26.55■■□□□ 1.84
LIMS2-201ENST00000324938 ZBTB7CA1YPR0 619 aa26.54■■□□□ 1.84
LIMS2-201ENST00000324938 SMARCA5O60264 1052 aaPredicted RBP26.54■■□□□ 1.84
LIMS2-201ENST00000324938 ALS2Q96Q42 1657 aa26.54■■□□□ 1.84
LIMS2-201ENST00000324938 HDGFL1Q5TGJ6 251 aa26.54■■□□□ 1.84
LIMS2-201ENST00000324938 SPRYD3Q8NCJ5 442 aa26.53■■□□□ 1.84
LIMS2-201ENST00000324938 LRRC59Q96AG4 307 aaKnown RBP26.53■■□□□ 1.84
LIMS2-201ENST00000324938 CHMP5Q9NZZ3 219 aa26.53■■□□□ 1.84
LIMS2-201ENST00000324938 RGPD5Q99666 1765 aa26.53■■□□□ 1.84
LIMS2-201ENST00000324938 MST1RQ04912 1400 aa26.53■■□□□ 1.84
LIMS2-201ENST00000324938 HOXB7P09629 217 aa26.53■■□□□ 1.84
LIMS2-201ENST00000324938 OVOS2A0A0G2JMS6 1433 aa26.53■■□□□ 1.84
LIMS2-201ENST00000324938 C1orf167Q5SNV9 1468 aa26.52■■□□□ 1.84
LIMS2-201ENST00000324938 AKAP4Q5JQC9 854 aa26.52■■□□□ 1.84
LIMS2-201ENST00000324938 XPCQ01831 940 aaPredicted RBP26.51■■□□□ 1.84
LIMS2-201ENST00000324938 LGR6Q9HBX8 967 aa26.51■■□□□ 1.84
LIMS2-201ENST00000324938 APBB1O00213 710 aa26.51■■□□□ 1.83
LIMS2-201ENST00000324938 EIF4A1P60842 406 aaKnown RBP26.51■■□□□ 1.83
LIMS2-201ENST00000324938 PLEKHO1Q53GL0 409 aaPredicted RBP26.51■■□□□ 1.83
LIMS2-201ENST00000324938 SIPA1L3O60292 1781 aaPredicted RBP26.51■■□□□ 1.83
LIMS2-201ENST00000324938 PXDNQ92626 1479 aa26.5■■□□□ 1.83
LIMS2-201ENST00000324938 AMOTQ4VCS5 1084 aa26.5■■□□□ 1.83
LIMS2-201ENST00000324938 ZNF530Q6P9A1 599 aaPredicted RBP26.5■■□□□ 1.83
LIMS2-201ENST00000324938 PROSER2Q86WR7 435 aaPredicted RBP26.5■■□□□ 1.83
LIMS2-201ENST00000324938 OSBPL3Q9H4L5 887 aa26.5■■□□□ 1.83
LIMS2-201ENST00000324938 SDSP20132 328 aa26.49■■□□□ 1.83
LIMS2-201ENST00000324938 LMTK3Q96Q04 1460 aa26.48■■□□□ 1.83
LIMS2-201ENST00000324938 ATP8B2P98198 1209 aa26.48■■□□□ 1.83
LIMS2-201ENST00000324938 CHMP4AQ9BY43 222 aa26.48■■□□□ 1.83
LIMS2-201ENST00000324938 ADAMTS7Q9UKP4 1686 aa26.48■■□□□ 1.83
LIMS2-201ENST00000324938 DDIT3P35638 169 aa26.47■■□□□ 1.83
LIMS2-201ENST00000324938 KRT28Q7Z3Y7 464 aa26.47■■□□□ 1.83
LIMS2-201ENST00000324938 ANKRD24Q8TF21 1146 aa26.47■■□□□ 1.83
LIMS2-201ENST00000324938 TEFQ10587 303 aa26.46■■□□□ 1.83
LIMS2-201ENST00000324938 PHAXQ9H814 394 aaKnown RBP26.46■■□□□ 1.83
LIMS2-201ENST00000324938 CASC1Q6TDU7 716 aa26.45■■□□□ 1.82
LIMS2-201ENST00000324938 USP44Q9H0E7 712 aa26.45■■□□□ 1.82
LIMS2-201ENST00000324938 C19orf44Q9H6X5 657 aa26.45■■□□□ 1.82
LIMS2-201ENST00000324938 EXOC6BQ9Y2D4 811 aa26.45■■□□□ 1.82
LIMS2-201ENST00000324938 IBTKQ9P2D0 1353 aaPredicted RBP26.44■■□□□ 1.82
LIMS2-201ENST00000324938 SALL3Q9BXA9 1300 aa26.44■■□□□ 1.82
LIMS2-201ENST00000324938 PNMA6EA0A0J9YXQ4 647 aa26.44■■□□□ 1.82
LIMS2-201ENST00000324938 PDE1AP54750 535 aa26.44■■□□□ 1.82
LIMS2-201ENST00000324938 LMOD2Q6P5Q4 547 aa26.44■■□□□ 1.82
LIMS2-201ENST00000324938 LRRFIP2Q9Y608 721 aaKnown RBP26.44■■□□□ 1.82
LIMS2-201ENST00000324938 HSP90AB1P08238 724 aaKnown RBP26.43■■□□□ 1.82
LIMS2-201ENST00000324938 LRRCC1Q9C099 1032 aa26.43■■□□□ 1.82
LIMS2-201ENST00000324938 STRCP1A6NGW2 1772 aa26.43■■□□□ 1.82
LIMS2-201ENST00000324938 BTBD11A6QL63 1104 aa26.42■■□□□ 1.82
LIMS2-201ENST00000324938 RNMTO43148 476 aaKnown RBP26.42■■□□□ 1.82
LIMS2-201ENST00000324938 C1orf141Q5JVX7 400 aa26.42■■□□□ 1.82
LIMS2-201ENST00000324938 MPRIPQ6WCQ1 1025 aa26.42■■□□□ 1.82
LIMS2-201ENST00000324938 UBTFL1P0CB47 393 aaPredicted RBP26.42■■□□□ 1.82
LIMS2-201ENST00000324938 USP26Q9BXU7 913 aa26.42■■□□□ 1.82
LIMS2-201ENST00000324938 KCNQ3O43525 872 aa26.41■■□□□ 1.82
LIMS2-201ENST00000324938 CD2BP2O95400 341 aaKnown RBP26.41■■□□□ 1.82
LIMS2-201ENST00000324938 EIF2S2P20042 333 aaKnown RBP26.41■■□□□ 1.82
LIMS2-201ENST00000324938 CRYBG1Q9Y4K1 1723 aa26.41■■□□□ 1.82
LIMS2-201ENST00000324938 K7ELQ4 463 aaPredicted RBP26.41■■□□□ 1.82
LIMS2-201ENST00000324938 CHPF2Q9P2E5 772 aa26.41■■□□□ 1.82
LIMS2-201ENST00000324938 CIZ1Q9ULV3 898 aaPredicted RBP26.41■■□□□ 1.82
LIMS2-201ENST00000324938 MCM4P33991 863 aa26.4■■□□□ 1.82
LIMS2-201ENST00000324938 SRCIN1Q9C0H9 1055 aa26.4■■□□□ 1.82
LIMS2-201ENST00000324938 AXIN2Q9Y2T1 843 aa26.4■■□□□ 1.82
LIMS2-201ENST00000324938 DCCP43146 1447 aa26.4■■□□□ 1.82
LIMS2-201ENST00000324938 RBM42Q9BTD8 480 aaKnown RBP26.39■■□□□ 1.82
LIMS2-201ENST00000324938 RABEP1Q15276 862 aa26.39■■□□□ 1.81
LIMS2-201ENST00000324938 PLEKHG5O94827 1062 aa26.38■■□□□ 1.81
LIMS2-201ENST00000324938 SCN11AQ9UI33 1791 aa26.38■■□□□ 1.81
LIMS2-201ENST00000324938 SSH3Q8TE77 659 aa26.38■■□□□ 1.81
LIMS2-201ENST00000324938 ERBB3P21860 1342 aa26.37■■□□□ 1.81
LIMS2-201ENST00000324938 HEG1Q9ULI3 1381 aa26.37■■□□□ 1.81
LIMS2-201ENST00000324938 COL18A1P39060 1754 aa26.37■■□□□ 1.81
LIMS2-201ENST00000324938 REC8O95072 547 aa26.36■■□□□ 1.81
LIMS2-201ENST00000324938 DNAAF4Q8WXU2 420 aa26.36■■□□□ 1.81
LIMS2-201ENST00000324938 MX1P20591 662 aa26.35■■□□□ 1.81
LIMS2-201ENST00000324938 ABCC6O95255 1503 aa26.35■■□□□ 1.81
LIMS2-201ENST00000324938 BEND3Q5T5X7 828 aa26.35■■□□□ 1.81
LIMS2-201ENST00000324938 ADCY9O60503 1353 aa26.34■■□□□ 1.81
LIMS2-201ENST00000324938 ERC2O15083 957 aa26.34■■□□□ 1.81
LIMS2-201ENST00000324938 AK9Q5TCS8 1911 aa26.34■■□□□ 1.81
LIMS2-201ENST00000324938 POLA2Q14181 598 aa26.33■■□□□ 1.81
LIMS2-201ENST00000324938 DBF4Q9UBU7 674 aaPredicted RBP26.33■■□□□ 1.81
LIMS2-201ENST00000324938 STAP2Q9UGK3 403 aa26.33■■□□□ 1.81
LIMS2-201ENST00000324938 TMEM94Q12767 1356 aa26.33■■□□□ 1.81
LIMS2-201ENST00000324938 PI4KAP2A4QPH2 592 aa26.33■■□□□ 1.81
LIMS2-201ENST00000324938 PI4KAP1Q8N8J0 262 aa26.33■■□□□ 1.81
LIMS2-201ENST00000324938 ATF3P18847 181 aa26.32■■□□□ 1.8
LIMS2-201ENST00000324938 AOX1Q06278 1338 aa26.32■■□□□ 1.8
LIMS2-201ENST00000324938 GIGYF1O75420 1035 aaPredicted RBP26.32■■□□□ 1.8
LIMS2-201ENST00000324938 HSP90AA1P07900 732 aaKnown RBP26.31■■□□□ 1.8
LIMS2-201ENST00000324938 RAB11FIP3O75154 756 aa26.3■■□□□ 1.8
LIMS2-201ENST00000324938 PPP1R42Q7Z4L9 355 aa26.3■■□□□ 1.8
LIMS2-201ENST00000324938 ZC3H6P61129 1189 aaKnown RBP26.3■■□□□ 1.8
LIMS2-201ENST00000324938 RAB3GAP1Q15042 981 aa26.3■■□□□ 1.8
LIMS2-201ENST00000324938 TSHZ3Q63HK5 1081 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms