RNA–Protein interactions for RNA: ENST00000324172.10

SAMD3-201, Transcript of sterile alpha motif domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene SAMD3, Length 993 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD3-201ENST00000324172 USHBP1Q8N6Y0 703 aa12.88□□□□□ -0.35
SAMD3-201ENST00000324172 C10orf71Q711Q0 1435 aa12.88□□□□□ -0.35
SAMD3-201ENST00000324172 PHF14O94880 888 aa12.87□□□□□ -0.35
SAMD3-201ENST00000324172 PIGBQ92521 554 aa12.87□□□□□ -0.35
SAMD3-201ENST00000324172 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.87□□□□□ -0.35
SAMD3-201ENST00000324172 MYH14Q7Z406 1995 aaKnown RBP12.87□□□□□ -0.35
SAMD3-201ENST00000324172 TONSLQ96HA7 1378 aa12.85□□□□□ -0.35
SAMD3-201ENST00000324172 HSP90AB2PQ58FF8 381 aa12.85□□□□□ -0.35
SAMD3-201ENST00000324172 LINC00116Q8NCU8 138 aa12.85□□□□□ -0.35
SAMD3-201ENST00000324172 RBM46Q8TBY0 533 aaKnown RBP12.85□□□□□ -0.35
SAMD3-201ENST00000324172 SPG7Q9UQ90 795 aa12.85□□□□□ -0.35
SAMD3-201ENST00000324172 ST20-MTHFSA0A0A6YYL1 179 aa12.84□□□□□ -0.35
SAMD3-201ENST00000324172 GNPATO15228 680 aa12.84□□□□□ -0.35
SAMD3-201ENST00000324172 MMP10P09238 476 aa12.84□□□□□ -0.35
SAMD3-201ENST00000324172 NLGN1Q8N2Q7 840 aa12.84□□□□□ -0.35
SAMD3-201ENST00000324172 GGNBP2Q9H3C7 697 aa12.84□□□□□ -0.35
SAMD3-201ENST00000324172 TMOD3Q9NYL9 352 aa12.84□□□□□ -0.35
SAMD3-201ENST00000324172 FSTL1Q12841 308 aa12.83□□□□□ -0.36
SAMD3-201ENST00000324172 JMYQ8N9B5 988 aa12.83□□□□□ -0.36
SAMD3-201ENST00000324172 KDRP35968 1356 aa12.82□□□□□ -0.36
SAMD3-201ENST00000324172 ATP6V1AP38606 617 aa12.82□□□□□ -0.36
SAMD3-201ENST00000324172 ITPK1Q13572 414 aa12.82□□□□□ -0.36
SAMD3-201ENST00000324172 KLRG1Q96E93 195 aa12.82□□□□□ -0.36
SAMD3-201ENST00000324172 WWC3Q9ULE0 1092 aa12.82□□□□□ -0.36
SAMD3-201ENST00000324172 CCDC88AQ3V6T2 1871 aa12.81□□□□□ -0.36
SAMD3-201ENST00000324172 TMF1P82094 1093 aa12.81□□□□□ -0.36
SAMD3-201ENST00000324172 RC3H1Q5TC82 1133 aaKnown RBP12.81□□□□□ -0.36
SAMD3-201ENST00000324172 NMRK2Q9NPI5 230 aa12.81□□□□□ -0.36
SAMD3-201ENST00000324172 CCDC87Q9NVE4 849 aa12.81□□□□□ -0.36
SAMD3-201ENST00000324172 BCS1LQ9Y276 419 aa12.81□□□□□ -0.36
SAMD3-201ENST00000324172 RTCBQ9Y3I0 505 aaKnown RBP12.81□□□□□ -0.36
SAMD3-201ENST00000324172 DLEC1Q9Y238 1755 aa12.8□□□□□ -0.36
SAMD3-201ENST00000324172 CDCA8Q53HL2 280 aa12.8□□□□□ -0.36
SAMD3-201ENST00000324172 TRAPPC3LQ5T215 181 aa12.8□□□□□ -0.36
SAMD3-201ENST00000324172 C16orf71Q8IYS4 520 aaPredicted RBP12.8□□□□□ -0.36
SAMD3-201ENST00000324172 IFNL2Q8IZJ0 200 aa12.8□□□□□ -0.36
SAMD3-201ENST00000324172 ASAP1Q9ULH1 1129 aa12.8□□□□□ -0.36
SAMD3-201ENST00000324172 KDM2BQ8NHM5 1336 aa12.8□□□□□ -0.36
SAMD3-201ENST00000324172 A0A0G2JLW4 131 aa12.79□□□□□ -0.36
SAMD3-201ENST00000324172 ARHGAP27Q6ZUM4 889 aa12.79□□□□□ -0.36
SAMD3-201ENST00000324172 SMIM5Q71RC9 77 aa12.79□□□□□ -0.36
SAMD3-201ENST00000324172 WASHC2AQ641Q2 1341 aa12.79□□□□□ -0.36
SAMD3-201ENST00000324172 CNTNAP4Q9C0A0 1308 aa12.79□□□□□ -0.36
SAMD3-201ENST00000324172 FCHSD2O94868 740 aa12.78□□□□□ -0.36
SAMD3-201ENST00000324172 PHKG2P15735 406 aa12.78□□□□□ -0.36
SAMD3-201ENST00000324172 ATG3Q9NT62 314 aa12.78□□□□□ -0.36
SAMD3-201ENST00000324172 ZC3H4Q9UPT8 1303 aaKnown RBP12.78□□□□□ -0.36
SAMD3-201ENST00000324172 AFDNP55196 1824 aaKnown RBP12.77□□□□□ -0.37
SAMD3-201ENST00000324172 VIRMAQ69YN4 1812 aaKnown RBP12.77□□□□□ -0.37
SAMD3-201ENST00000324172 ERVV-2B6SEH9 535 aa12.77□□□□□ -0.37
SAMD3-201ENST00000324172 GYS1P13807 737 aa12.77□□□□□ -0.37
SAMD3-201ENST00000324172 DPEP1P16444 411 aa12.77□□□□□ -0.37
SAMD3-201ENST00000324172 C9orf131Q5VYM1 1079 aa12.77□□□□□ -0.37
SAMD3-201ENST00000324172 EMILIN1Q9Y6C2 1016 aa12.77□□□□□ -0.37
SAMD3-201ENST00000324172 PARP3Q9Y6F1 533 aa12.77□□□□□ -0.37
SAMD3-201ENST00000324172 DICER1Q9UPY3 1922 aaKnown RBP12.77□□□□□ -0.37
SAMD3-201ENST00000324172 KCPQ6ZWJ8 1503 aa12.77□□□□□ -0.37
SAMD3-201ENST00000324172 ADAMTS7Q9UKP4 1686 aa12.77□□□□□ -0.37
SAMD3-201ENST00000324172 KCNA3P22001 575 aa12.76□□□□□ -0.37
SAMD3-201ENST00000324172 RFC4P35249 363 aa12.76□□□□□ -0.37
SAMD3-201ENST00000324172 COL13A1Q5TAT6 717 aaPredicted RBP12.76□□□□□ -0.37
SAMD3-201ENST00000324172 CNKSR2Q8WXI2 1034 aa12.76□□□□□ -0.37
SAMD3-201ENST00000324172 DCAF5Q96JK2 942 aa12.76□□□□□ -0.37
SAMD3-201ENST00000324172 PIM2Q9P1W9 311 aa12.76□□□□□ -0.37
SAMD3-201ENST00000324172 TJP1Q07157 1748 aa12.76□□□□□ -0.37
SAMD3-201ENST00000324172 TIAM2Q8IVF5 1701 aa12.76□□□□□ -0.37
SAMD3-201ENST00000324172 SCN11AQ9UI33 1791 aa12.76□□□□□ -0.37
SAMD3-201ENST00000324172 RPS6KA4O75676 772 aa12.75□□□□□ -0.37
SAMD3-201ENST00000324172 HSP90AB1P08238 724 aaKnown RBP12.75□□□□□ -0.37
SAMD3-201ENST00000324172 ARHGEF1Q92888 912 aaKnown RBP12.75□□□□□ -0.37
SAMD3-201ENST00000324172 EYA1Q99502 592 aa12.75□□□□□ -0.37
SAMD3-201ENST00000324172 RNF216Q9NWF9 866 aaPredicted RBP12.75□□□□□ -0.37
SAMD3-201ENST00000324172 NRXN2Q9P2S2 1712 aa12.75□□□□□ -0.37
SAMD3-201ENST00000324172 KDM6AO15550 1401 aaPredicted RBP12.74□□□□□ -0.37
SAMD3-201ENST00000324172 PRELPP51888 382 aa12.74□□□□□ -0.37
SAMD3-201ENST00000324172 DALRD3Q5D0E6 543 aaKnown RBP12.74□□□□□ -0.37
SAMD3-201ENST00000324172 SMC1BQ8NDV3 1235 aa12.74□□□□□ -0.37
SAMD3-201ENST00000324172 C1QBPQ07021 282 aaKnown RBP12.73□□□□□ -0.37
SAMD3-201ENST00000324172 TNS4Q8IZW8 715 aa12.73□□□□□ -0.37
SAMD3-201ENST00000324172 SLC4A9Q96Q91 983 aa12.73□□□□□ -0.37
SAMD3-201ENST00000324172 CARD14Q9BXL6 1004 aa12.72□□□□□ -0.37
SAMD3-201ENST00000324172 RNF181Q9P0P0 153 aa12.72□□□□□ -0.37
SAMD3-201ENST00000324172 USP42Q9H9J4 1324 aaKnown RBP12.71□□□□□ -0.37
SAMD3-201ENST00000324172 PPM1GO15355 546 aaPredicted RBP12.71□□□□□ -0.37
SAMD3-201ENST00000324172 RBM42Q9BTD8 480 aaKnown RBP12.71□□□□□ -0.37
SAMD3-201ENST00000324172 HTRA3P83110 453 aa12.7□□□□□ -0.38
SAMD3-201ENST00000324172 RRAGCQ9HB90 399 aa12.7□□□□□ -0.38
SAMD3-201ENST00000324172 POLKQ9UBT6 870 aa12.7□□□□□ -0.38
SAMD3-201ENST00000324172 FER1L6Q2WGJ9 1857 aa12.7□□□□□ -0.38
SAMD3-201ENST00000324172 CRKLP46109 303 aaKnown RBP12.68□□□□□ -0.38
SAMD3-201ENST00000324172 EIF4A2Q14240 407 aaKnown RBP12.68□□□□□ -0.38
SAMD3-201ENST00000324172 AMOTQ4VCS5 1084 aa12.68□□□□□ -0.38
SAMD3-201ENST00000324172 PLEKHO1Q53GL0 409 aaPredicted RBP12.68□□□□□ -0.38
SAMD3-201ENST00000324172 VEGFAP15692 232 aaPredicted RBP12.67□□□□□ -0.38
SAMD3-201ENST00000324172 LMNB1P20700 586 aa12.67□□□□□ -0.38
SAMD3-201ENST00000324172 CABP4P57796 275 aa12.67□□□□□ -0.38
SAMD3-201ENST00000324172 DDR1Q08345 913 aa12.67□□□□□ -0.38
SAMD3-201ENST00000324172 GLTPD2A6NH11 291 aa12.66□□□□□ -0.38
SAMD3-201ENST00000324172 POLRMTO00411 1230 aaKnown RBP12.66□□□□□ -0.38
SAMD3-201ENST00000324172 TM4SF1P30408 202 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms