RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 KCNH5Q8NCM2 988 aa9.99□□□□□ -0.81
CSTF3-201ENST00000323959 LOC105371045A0A1W2PR82 267 aa9.98□□□□□ -0.81
CSTF3-201ENST00000323959 RASSF7Q02833 373 aa9.98□□□□□ -0.81
CSTF3-201ENST00000323959 INSRP06213 1382 aa9.98□□□□□ -0.81
CSTF3-201ENST00000323959 ADGRB1O14514 1584 aa9.98□□□□□ -0.81
CSTF3-201ENST00000323959 PRDM6Q9NQX0 595 aa9.97□□□□□ -0.81
CSTF3-201ENST00000323959 SAGE1Q9NXZ1 904 aa9.97□□□□□ -0.81
CSTF3-201ENST00000323959 TSKSQ9UJT2 592 aa9.97□□□□□ -0.81
CSTF3-201ENST00000323959 NFAT5O94916 1531 aa9.97□□□□□ -0.81
CSTF3-201ENST00000323959 PKN2Q16513 984 aaKnown RBP9.97□□□□□ -0.81
CSTF3-201ENST00000323959 L3MBTL3Q96JM7 780 aaPredicted RBP9.97□□□□□ -0.81
CSTF3-201ENST00000323959 TRPM7Q96QT4 1865 aa9.97□□□□□ -0.81
CSTF3-201ENST00000323959 GOLGB1Q14789 3259 aaKnown RBP9.97□□□□□ -0.81
CSTF3-201ENST00000323959 CTU1Q7Z7A3 348 aaKnown RBP9.97□□□□□ -0.81
CSTF3-201ENST00000323959 HHIPL1Q96JK4 782 aa9.96□□□□□ -0.81
CSTF3-201ENST00000323959 POTEIP0CG38 1075 aa9.96□□□□□ -0.82
CSTF3-201ENST00000323959 POTEJP0CG39 1038 aa9.96□□□□□ -0.82
CSTF3-201ENST00000323959 SMARCC1Q92922 1105 aaPredicted RBP9.96□□□□□ -0.82
CSTF3-201ENST00000323959 CCDC61Q9Y6R9 512 aa9.96□□□□□ -0.82
CSTF3-201ENST00000323959 PCNTO95613 3336 aa9.95□□□□□ -0.82
CSTF3-201ENST00000323959 SYTL4Q96C24 671 aaPredicted RBP9.95□□□□□ -0.82
CSTF3-201ENST00000323959 TAF1DQ9H5J8 278 aaPredicted RBP9.95□□□□□ -0.82
CSTF3-201ENST00000323959 PARP3Q9Y6F1 533 aa9.95□□□□□ -0.82
CSTF3-201ENST00000323959 PALLDQ8WX93 1383 aa9.95□□□□□ -0.82
CSTF3-201ENST00000323959 RBBP6Q7Z6E9 1792 aaKnown RBP9.95□□□□□ -0.82
CSTF3-201ENST00000323959 HPS5Q9UPZ3 1129 aa9.94□□□□□ -0.82
CSTF3-201ENST00000323959 PLA2G5P39877 138 aa9.94□□□□□ -0.82
CSTF3-201ENST00000323959 NLRP6P59044 892 aa9.94□□□□□ -0.82
CSTF3-201ENST00000323959 TLL2Q9Y6L7 1015 aa9.94□□□□□ -0.82
CSTF3-201ENST00000323959 SMG6Q86US8 1419 aaKnown RBP9.94□□□□□ -0.82
CSTF3-201ENST00000323959 PHF14O94880 888 aa9.93□□□□□ -0.82
CSTF3-201ENST00000323959 TMF1P82094 1093 aa9.93□□□□□ -0.82
CSTF3-201ENST00000323959 CYP4F22Q6NT55 531 aa9.92□□□□□ -0.82
CSTF3-201ENST00000323959 COL25A1Q9BXS0 654 aaPredicted RBP9.92□□□□□ -0.82
CSTF3-201ENST00000323959 COLQQ9Y215 455 aaPredicted RBP9.92□□□□□ -0.82
CSTF3-201ENST00000323959 PAXIP1Q6ZW49 1069 aaPredicted RBP9.92□□□□□ -0.82
CSTF3-201ENST00000323959 PNMA8AQ86V59 439 aaPredicted RBP9.92□□□□□ -0.82
CSTF3-201ENST00000323959 LTBP3Q9NS15 1303 aa9.92□□□□□ -0.82
CSTF3-201ENST00000323959 MAP2P11137 1827 aaKnown RBP9.92□□□□□ -0.82
CSTF3-201ENST00000323959 AMIGO3Q86WK7 504 aa9.91□□□□□ -0.82
CSTF3-201ENST00000323959 CNTROBQ8N137 903 aa9.91□□□□□ -0.82
CSTF3-201ENST00000323959 DDX21Q9NR30 783 aaKnown RBP eCLIP9.91□□□□□ -0.82
CSTF3-201ENST00000323959 NLRP2Q9NX02 1062 aa9.91□□□□□ -0.82
CSTF3-201ENST00000323959 ADRA2BP18089 450 aa9.91□□□□□ -0.82
CSTF3-201ENST00000323959 FAM50AQ14320 339 aaKnown RBP9.91□□□□□ -0.82
CSTF3-201ENST00000323959 DDX54Q8TDD1 881 aaKnown RBP9.91□□□□□ -0.82
CSTF3-201ENST00000323959 AOC2O75106 756 aa9.9□□□□□ -0.83
CSTF3-201ENST00000323959 HOXD11P31277 338 aaPredicted RBP9.89□□□□□ -0.83
CSTF3-201ENST00000323959 CFAP70Q5T0N1 1121 aa9.89□□□□□ -0.83
CSTF3-201ENST00000323959 ZNF831Q5JPB2 1677 aa9.89□□□□□ -0.83
CSTF3-201ENST00000323959 FER1L6Q2WGJ9 1857 aa9.89□□□□□ -0.83
CSTF3-201ENST00000323959 NFKBIEO00221 500 aa9.89□□□□□ -0.83
CSTF3-201ENST00000323959 AKAP4Q5JQC9 854 aa9.88□□□□□ -0.83
CSTF3-201ENST00000323959 SMIM5Q71RC9 77 aa9.88□□□□□ -0.83
CSTF3-201ENST00000323959 CUL9Q8IWT3 2517 aa9.88□□□□□ -0.83
CSTF3-201ENST00000323959 NBPF1Q3BBV0 1214 aa9.88□□□□□ -0.83
CSTF3-201ENST00000323959 FAM122AQ96E09 287 aa9.88□□□□□ -0.83
CSTF3-201ENST00000323959 HACL1Q9UJ83 578 aa9.88□□□□□ -0.83
CSTF3-201ENST00000323959 ERFEQ4G0M1 354 aa9.87□□□□□ -0.83
CSTF3-201ENST00000323959 CLEC11AQ9Y240 323 aa9.87□□□□□ -0.83
CSTF3-201ENST00000323959 CDK19Q9BWU1 502 aa9.87□□□□□ -0.83
CSTF3-201ENST00000323959 CABP2Q9NPB3 220 aa9.87□□□□□ -0.83
CSTF3-201ENST00000323959 COL9A1P20849 921 aa9.86□□□□□ -0.83
CSTF3-201ENST00000323959 NOGQ13253 232 aa9.86□□□□□ -0.83
CSTF3-201ENST00000323959 GNPATO15228 680 aa9.86□□□□□ -0.83
CSTF3-201ENST00000323959 DDNO94850 711 aaPredicted RBP9.86□□□□□ -0.83
CSTF3-201ENST00000323959 CIAPIN1Q6FI81 312 aa9.86□□□□□ -0.83
CSTF3-201ENST00000323959 EPHX2P34913 555 aa9.85□□□□□ -0.83
CSTF3-201ENST00000323959 EAPPQ56P03 285 aaPredicted RBP9.85□□□□□ -0.83
CSTF3-201ENST00000323959 OTUD5Q96G74 571 aa9.85□□□□□ -0.83
CSTF3-201ENST00000323959 SNX27Q96L92 541 aa9.85□□□□□ -0.83
CSTF3-201ENST00000323959 LTN1O94822 1766 aa9.84□□□□□ -0.83
CSTF3-201ENST00000323959 TRAPPC3LQ5T215 181 aa9.84□□□□□ -0.83
CSTF3-201ENST00000323959 ANKRD13DQ6ZTN6 518 aa9.84□□□□□ -0.83
CSTF3-201ENST00000323959 LINC00116Q8NCU8 138 aa9.84□□□□□ -0.83
CSTF3-201ENST00000323959 ZCRB1Q8TBF4 217 aaKnown RBP9.84□□□□□ -0.83
CSTF3-201ENST00000323959 TRAK1Q9UPV9 953 aa9.84□□□□□ -0.83
CSTF3-201ENST00000323959 CGNL1Q0VF96 1302 aa9.84□□□□□ -0.83
CSTF3-201ENST00000323959 CHRNA5P30532 468 aa9.84□□□□□ -0.83
CSTF3-201ENST00000323959 TTLL6Q8N841 843 aa9.84□□□□□ -0.83
CSTF3-201ENST00000323959 NRXN2Q9P2S2 1712 aa9.83□□□□□ -0.84
CSTF3-201ENST00000323959 TTC21AQ8NDW8 1320 aa9.83□□□□□ -0.84
CSTF3-201ENST00000323959 GYS1P13807 737 aa9.83□□□□□ -0.84
CSTF3-201ENST00000323959 GRM1Q13255 1194 aa9.83□□□□□ -0.84
CSTF3-201ENST00000323959 ITGB4P16144 1822 aa9.83□□□□□ -0.84
CSTF3-201ENST00000323959 INTS3Q68E01 1043 aaKnown RBP9.83□□□□□ -0.84
CSTF3-201ENST00000323959 ANKRD24Q8TF21 1146 aa9.83□□□□□ -0.84
CSTF3-201ENST00000323959 MAP1SQ66K74 1059 aaPredicted RBP9.82□□□□□ -0.84
CSTF3-201ENST00000323959 USP31Q70CQ4 1352 aa9.82□□□□□ -0.84
CSTF3-201ENST00000323959 RGL3Q3MIN7 710 aa9.82□□□□□ -0.84
CSTF3-201ENST00000323959 FBXO46Q6PJ61 603 aaPredicted RBP9.82□□□□□ -0.84
CSTF3-201ENST00000323959 PDZRN3Q9UPQ7 1066 aa9.82□□□□□ -0.84
CSTF3-201ENST00000323959 A0A1W2PPC1 479 aa9.81□□□□□ -0.84
CSTF3-201ENST00000323959 STXBP5LQ9Y2K9 1186 aa9.81□□□□□ -0.84
CSTF3-201ENST00000323959 RTCBQ9Y3I0 505 aaKnown RBP9.81□□□□□ -0.84
CSTF3-201ENST00000323959 SCN11AQ9UI33 1791 aa9.81□□□□□ -0.84
CSTF3-201ENST00000323959 AKAP11Q9UKA4 1901 aa9.81□□□□□ -0.84
CSTF3-201ENST00000323959 RC3H1Q5TC82 1133 aaKnown RBP9.81□□□□□ -0.84
CSTF3-201ENST00000323959 GPR153Q6NV75 609 aa9.81□□□□□ -0.84
CSTF3-201ENST00000323959 REM2Q8IYK8 340 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms