RNA–Protein interactions for RNA: ENST00000321892.8

BPTF-202, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BPTF, Length 11,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-202ENST00000321892 HLTFQ14527 1009 aaKnown RBP eCLIP17.63■□□□□ 0.411e-6■■□□□ 13.8
BPTF-202ENST00000321892 SETSIPP0DME0 302 aa17.63■□□□□ 0.41
BPTF-202ENST00000321892 HECW1Q76N89 1606 aa17.62■□□□□ 0.41
BPTF-202ENST00000321892 TCP11L2Q8N4U5 519 aa17.62■□□□□ 0.41
BPTF-202ENST00000321892 CDCA7LQ96GN5 454 aa17.62■□□□□ 0.41
BPTF-202ENST00000321892 NKTRP30414 1462 aaKnown RBP17.62■□□□□ 0.41
BPTF-202ENST00000321892 TNPO1Q92973 898 aaKnown RBP17.62■□□□□ 0.41
BPTF-202ENST00000321892 NUTM2FA1L443 756 aa17.62■□□□□ 0.41
BPTF-202ENST00000321892 EVA1CP58658 441 aa17.62■□□□□ 0.41
BPTF-202ENST00000321892 FSD2A1L4K1 749 aa17.62■□□□□ 0.41
BPTF-202ENST00000321892 TDO2P48775 406 aa17.62■□□□□ 0.41
BPTF-202ENST00000321892 TRMT1Q9NXH9 659 aaKnown RBP17.62■□□□□ 0.41
BPTF-202ENST00000321892 CCDC121Q6ZUS5 278 aa17.61■□□□□ 0.41
BPTF-202ENST00000321892 RSPH14Q9UHP6 348 aa17.61■□□□□ 0.41
BPTF-202ENST00000321892 TSG101Q99816 390 aa17.61■□□□□ 0.41
BPTF-202ENST00000321892 MSH5O43196 834 aa17.61■□□□□ 0.41
BPTF-202ENST00000321892 TRIM21P19474 475 aaKnown RBP17.61■□□□□ 0.41
BPTF-202ENST00000321892 CKAP4Q07065 602 aaKnown RBP17.61■□□□□ 0.41
BPTF-202ENST00000321892 USP25Q9UHP3 1055 aa17.61■□□□□ 0.41
BPTF-202ENST00000321892 LRRC9Q6ZRR7 1453 aa17.61■□□□□ 0.41
BPTF-202ENST00000321892 DDX12PQ92771 950 aa17.6■□□□□ 0.41
BPTF-202ENST00000321892 RSRC1Q96IZ7 334 aaKnown RBP17.6■□□□□ 0.41
BPTF-202ENST00000321892 AIMP1Q12904 312 aaKnown RBP17.6■□□□□ 0.41
BPTF-202ENST00000321892 CLCN1P35523 988 aa17.6■□□□□ 0.41
BPTF-202ENST00000321892 SPECC1Q5M775 1068 aa17.6■□□□□ 0.41
BPTF-202ENST00000321892 WDR63Q8IWG1 891 aa17.6■□□□□ 0.41
BPTF-202ENST00000321892 HYPKQ9NX55 129 aa17.6■□□□□ 0.41
BPTF-202ENST00000321892 SSBP05455 408 aaKnown RBP eCLIP17.6■□□□□ 0.41
BPTF-202ENST00000321892 UVSSAQ2YD98 709 aa17.6■□□□□ 0.41
BPTF-202ENST00000321892 FAM114A1Q8IWE2 563 aa17.6■□□□□ 0.41
BPTF-202ENST00000321892 UBAC1Q9BSL1 405 aa17.59■□□□□ 0.41
BPTF-202ENST00000321892 TMC6Q7Z403 805 aa17.59■□□□□ 0.41
BPTF-202ENST00000321892 STMN4Q9H169 189 aaPredicted RBP17.59■□□□□ 0.41
BPTF-202ENST00000321892 NAP1L3Q99457 506 aaPredicted RBP17.59■□□□□ 0.41
BPTF-202ENST00000321892 DDX19AQ9NUU7 478 aaKnown RBP17.59■□□□□ 0.41
BPTF-202ENST00000321892 CCDC158Q5M9N0 1113 aa17.59■□□□□ 0.41
BPTF-202ENST00000321892 ATF7IPQ6VMQ6 1270 aa17.59■□□□□ 0.41
BPTF-202ENST00000321892 STAC3Q96MF2 364 aa17.59■□□□□ 0.41
BPTF-202ENST00000321892 PPP2R1AP30153 589 aa17.59■□□□□ 0.41
BPTF-202ENST00000321892 KIF6Q6ZMV9 814 aa17.59■□□□□ 0.41
BPTF-202ENST00000321892 LIG1P18858 919 aa17.58■□□□□ 0.41
BPTF-202ENST00000321892 CCDC6Q16204 474 aa17.58■□□□□ 0.41
BPTF-202ENST00000321892 GBP6Q6ZN66 633 aa17.58■□□□□ 0.41
BPTF-202ENST00000321892 AACSQ86V21 672 aa17.58■□□□□ 0.41
BPTF-202ENST00000321892 SWAP70Q9UH65 585 aa17.58■□□□□ 0.4
BPTF-202ENST00000321892 TUBB4BP68371 445 aa17.58■□□□□ 0.4
BPTF-202ENST00000321892 SOGA3Q5TF21 947 aa17.58■□□□□ 0.4
BPTF-202ENST00000321892 KLHL10Q6JEL2 608 aa17.58■□□□□ 0.4
BPTF-202ENST00000321892 U3KPZ7 1027 aaPredicted RBP17.58■□□□□ 0.4
BPTF-202ENST00000321892 NUP133Q8WUM0 1156 aa17.58■□□□□ 0.4
BPTF-202ENST00000321892 NEBLO76041 1014 aa17.57■□□□□ 0.4
BPTF-202ENST00000321892 ZSCAN25Q6NSZ9 544 aa17.57■□□□□ 0.4
BPTF-202ENST00000321892 CTNNBL1Q8WYA6 563 aaPredicted RBP17.57■□□□□ 0.4
BPTF-202ENST00000321892 GAS2L2Q8NHY3 880 aa17.57■□□□□ 0.4
BPTF-202ENST00000321892 SREK1Q8WXA9 508 aaKnown RBP17.57■□□□□ 0.4
BPTF-202ENST00000321892 FBF1Q8TES7 1133 aa17.57■□□□□ 0.4
BPTF-202ENST00000321892 CEP83Q9Y592 693 aa17.57■□□□□ 0.4
BPTF-202ENST00000321892 EHBP1L1Q8N3D4 1523 aa17.57■□□□□ 0.4
BPTF-202ENST00000321892 CEP57Q86XR8 500 aa17.57■□□□□ 0.4
BPTF-202ENST00000321892 TWISTNBQ3B726 338 aaPredicted RBP17.57■□□□□ 0.4
BPTF-202ENST00000321892 SRRTQ9BXP5 876 aaKnown RBP17.57■□□□□ 0.4
BPTF-202ENST00000321892 DNAI2Q9GZS0 605 aa17.57■□□□□ 0.4
BPTF-202ENST00000321892 CACNA2D4Q7Z3S7 1137 aa17.57■□□□□ 0.4
BPTF-202ENST00000321892 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.56■□□□□ 0.4
BPTF-202ENST00000321892 EBAG9O00559 213 aa17.56■□□□□ 0.4
BPTF-202ENST00000321892 OPA1O60313 960 aa17.56■□□□□ 0.4
BPTF-202ENST00000321892 SCLT1Q96NL6 688 aa17.56■□□□□ 0.4
BPTF-202ENST00000321892 PDS5BQ9NTI5 1447 aa17.56■□□□□ 0.4
BPTF-202ENST00000321892 CWC27Q6UX04 472 aaKnown RBP17.55■□□□□ 0.4
BPTF-202ENST00000321892 IKBKGQ9Y6K9 419 aa17.55■□□□□ 0.4
BPTF-202ENST00000321892 CCDC160A6NGH7 325 aa17.55■□□□□ 0.4
BPTF-202ENST00000321892 HS1BP3Q53T59 392 aa17.55■□□□□ 0.4
BPTF-202ENST00000321892 RASSF4Q9H2L5 321 aa17.55■□□□□ 0.4
BPTF-202ENST00000321892 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.55■□□□□ 0.4
BPTF-202ENST00000321892 V9GYY5 206 aaPredicted RBP17.55■□□□□ 0.4
BPTF-202ENST00000321892 CCDC155Q8N6L0 562 aa17.55■□□□□ 0.4
BPTF-202ENST00000321892 DDX23Q9BUQ8 820 aaKnown RBP17.55■□□□□ 0.4
BPTF-202ENST00000321892 SMAP1Q8IYB5 467 aaPredicted RBP17.55■□□□□ 0.4
BPTF-202ENST00000321892 DHX29Q7Z478 1369 aaKnown RBP17.54■□□□□ 0.4
BPTF-202ENST00000321892 KIF4AO95239 1232 aa17.54■□□□□ 0.4
BPTF-202ENST00000321892 TUBB4AP04350 444 aa17.54■□□□□ 0.4
BPTF-202ENST00000321892 RASAL2Q9UJF2 1139 aa17.54■□□□□ 0.4
BPTF-202ENST00000321892 CCDC12Q8WUD4 166 aaPredicted RBP17.54■□□□□ 0.4
BPTF-202ENST00000321892 MATR3P43243 847 aaKnown RBP eCLIP17.54■□□□□ 0.4
BPTF-202ENST00000321892 ZSCAN23Q3MJ62 389 aa17.54■□□□□ 0.4
BPTF-202ENST00000321892 SSFA2P28290 1259 aa17.54■□□□□ 0.4
BPTF-202ENST00000321892 LARP1Q6PKG0 1096 aaKnown RBP17.54■□□□□ 0.4
BPTF-202ENST00000321892 TTC14Q96N46 770 aa17.54■□□□□ 0.4
BPTF-202ENST00000321892 DDX46Q7L014 1031 aaKnown RBP17.54■□□□□ 0.4
BPTF-202ENST00000321892 SYTL4Q96C24 671 aaPredicted RBP17.54■□□□□ 0.4
BPTF-202ENST00000321892 MAP4K4O95819 1239 aaPredicted RBP17.54■□□□□ 0.4
BPTF-202ENST00000321892 CAPN2P17655 700 aa17.54■□□□□ 0.4
BPTF-202ENST00000321892 UBE2HP62256 183 aa17.54■□□□□ 0.4
BPTF-202ENST00000321892 CKAP2LQ8IYA6 745 aa17.54■□□□□ 0.4
BPTF-202ENST00000321892 BCAR3O75815 825 aa17.53■□□□□ 0.4
BPTF-202ENST00000321892 GOLGA1Q92805 767 aa17.53■□□□□ 0.4
BPTF-202ENST00000321892 CTAGE9A4FU28 777 aa17.53■□□□□ 0.4
BPTF-202ENST00000321892 JADE2Q9NQC1 790 aa17.53■□□□□ 0.4
BPTF-202ENST00000321892 NOL3O60936 208 aaKnown RBP17.53■□□□□ 0.4
BPTF-202ENST00000321892 SARNPP82979 210 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms