RNA–Protein interactions for RNA: ENST00000321407.2

GCC1-201, Transcript of GRIP and coiled-coil domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCC1, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCC1-201ENST00000321407 DHX16O60231 1041 aaKnown RBP17.75■□□□□ 0.43
GCC1-201ENST00000321407 TRDNQ13061 729 aa17.75■□□□□ 0.43
GCC1-201ENST00000321407 AAMPQ13685 434 aa17.75■□□□□ 0.43
GCC1-201ENST00000321407 RPAP2Q8IXW5 612 aaPredicted RBP17.75■□□□□ 0.43
GCC1-201ENST00000321407 CHAF1AQ13111 956 aaPredicted RBP17.75■□□□□ 0.43
GCC1-201ENST00000321407 RRP12Q5JTH9 1297 aaKnown RBP17.75■□□□□ 0.43
GCC1-201ENST00000321407 AK7Q96M32 723 aa17.75■□□□□ 0.43
GCC1-201ENST00000321407 PIK3C2GO75747 1445 aa17.75■□□□□ 0.43
GCC1-201ENST00000321407 CCDC158Q5M9N0 1113 aa17.75■□□□□ 0.43
GCC1-201ENST00000321407 NFKBIBQ15653 356 aa17.74■□□□□ 0.43
GCC1-201ENST00000321407 BOLA2Q9H3K6 86 aa17.74■□□□□ 0.43
GCC1-201ENST00000321407 FAM184AQ8NB25 1140 aa17.74■□□□□ 0.43
GCC1-201ENST00000321407 BACH2Q9BYV9 841 aa17.74■□□□□ 0.43
GCC1-201ENST00000321407 CWF19L2Q2TBE0 894 aaKnown RBP17.74■□□□□ 0.43
GCC1-201ENST00000321407 LRRIQ1Q96JM4 1722 aa17.74■□□□□ 0.43
GCC1-201ENST00000321407 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.74■□□□□ 0.43
GCC1-201ENST00000321407 VAMP4O75379 141 aa17.74■□□□□ 0.43
GCC1-201ENST00000321407 TRIM34Q9BYJ4 488 aa17.74■□□□□ 0.43
GCC1-201ENST00000321407 ANO8Q9HCE9 1232 aaPredicted RBP17.74■□□□□ 0.43
GCC1-201ENST00000321407 NLRP1Q9C000 1473 aa17.74■□□□□ 0.43
GCC1-201ENST00000321407 ABCA9Q8IUA7 1624 aa17.74■□□□□ 0.43
GCC1-201ENST00000321407 SBNO1A3KN83 1393 aa17.73■□□□□ 0.43
GCC1-201ENST00000321407 RNMTO43148 476 aaKnown RBP17.73■□□□□ 0.43
GCC1-201ENST00000321407 G2E3Q7L622 706 aa17.73■□□□□ 0.43
GCC1-201ENST00000321407 IDH1O75874 414 aaKnown RBP17.73■□□□□ 0.43
GCC1-201ENST00000321407 CWC27Q6UX04 472 aaKnown RBP17.73■□□□□ 0.43
GCC1-201ENST00000321407 PRIM1P49642 420 aaKnown RBP17.73■□□□□ 0.43
GCC1-201ENST00000321407 NFXL1Q6ZNB6 911 aa17.73■□□□□ 0.43
GCC1-201ENST00000321407 ERC1Q8IUD2 1116 aa17.73■□□□□ 0.43
GCC1-201ENST00000321407 GBP4Q96PP9 640 aa17.73■□□□□ 0.43
GCC1-201ENST00000321407 A2ML1A8K2U0 1454 aa17.72■□□□□ 0.43
GCC1-201ENST00000321407 VPS53Q5VIR6 699 aa17.72■□□□□ 0.43
GCC1-201ENST00000321407 SIRT1Q96EB6 747 aa17.72■□□□□ 0.43
GCC1-201ENST00000321407 ZNF652Q9Y2D9 606 aa17.72■□□□□ 0.43
GCC1-201ENST00000321407 RALYLQ86SE5 291 aaKnown RBP17.72■□□□□ 0.43
GCC1-201ENST00000321407 CPLX1O14810 134 aa17.72■□□□□ 0.43
GCC1-201ENST00000321407 H3BQV1 296 aa17.71■□□□□ 0.43
GCC1-201ENST00000321407 IFFO2Q5TF58 517 aa17.71■□□□□ 0.43
GCC1-201ENST00000321407 RNF20Q5VTR2 975 aa17.71■□□□□ 0.43
GCC1-201ENST00000321407 PPP1R42Q7Z4L9 355 aa17.71■□□□□ 0.43
GCC1-201ENST00000321407 TRIM35Q9UPQ4 493 aa17.71■□□□□ 0.43
GCC1-201ENST00000321407 MAP3K5Q99683 1374 aa17.71■□□□□ 0.43
GCC1-201ENST00000321407 IGHDP01880 384 aa17.71■□□□□ 0.43
GCC1-201ENST00000321407 IGHMBP2P38935 993 aaKnown RBP17.71■□□□□ 0.43
GCC1-201ENST00000321407 SNRKQ9NRH2 765 aa17.71■□□□□ 0.43
GCC1-201ENST00000321407 PCDHB15Q9Y5E8 787 aa17.71■□□□□ 0.43
GCC1-201ENST00000321407 NEK4P51957 841 aa17.71■□□□□ 0.43
GCC1-201ENST00000321407 IFIT5Q13325 482 aaKnown RBP17.71■□□□□ 0.43
GCC1-201ENST00000321407 NCBP3Q53F19 620 aaKnown RBP17.71■□□□□ 0.43
GCC1-201ENST00000321407 DCAF5Q96JK2 942 aa17.71■□□□□ 0.43
GCC1-201ENST00000321407 BRPF3Q9ULD4 1205 aa17.7■□□□□ 0.42
GCC1-201ENST00000321407 ARAP3Q8WWN8 1544 aa17.7■□□□□ 0.42
GCC1-201ENST00000321407 KCNQ3O43525 872 aa17.7■□□□□ 0.42
GCC1-201ENST00000321407 AMOTL1Q8IY63 956 aa17.7■□□□□ 0.42
GCC1-201ENST00000321407 KIAA0232Q92628 1395 aa17.7■□□□□ 0.42
GCC1-201ENST00000321407 VPS37CA5D8V6 355 aaPredicted RBP17.7■□□□□ 0.42
GCC1-201ENST00000321407 RFC4P35249 363 aa17.7■□□□□ 0.42
GCC1-201ENST00000321407 SYNE3Q6ZMZ3 975 aa17.7■□□□□ 0.42
GCC1-201ENST00000321407 RASSF8Q8NHQ8 419 aa17.69■□□□□ 0.42
GCC1-201ENST00000321407 IL16Q14005 1332 aa17.69■□□□□ 0.42
GCC1-201ENST00000321407 A1BGP04217 495 aa17.69■□□□□ 0.42
GCC1-201ENST00000321407 USP21Q9UK80 565 aa17.69■□□□□ 0.42
GCC1-201ENST00000321407 ZFYVE9O95405 1425 aa17.68■□□□□ 0.42
GCC1-201ENST00000321407 AKAP17AQ02040 695 aaKnown RBP17.68■□□□□ 0.42
GCC1-201ENST00000321407 SF3A1Q15459 793 aaKnown RBP17.68■□□□□ 0.42
GCC1-201ENST00000321407 LDHAL6AQ6ZMR3 332 aa17.68■□□□□ 0.42
GCC1-201ENST00000321407 PIK3R4Q99570 1358 aa17.68■□□□□ 0.42
GCC1-201ENST00000321407 ZNF790Q6PG37 636 aa17.67■□□□□ 0.42
GCC1-201ENST00000321407 CCDC24Q8N4L8 307 aa17.67■□□□□ 0.42
GCC1-201ENST00000321407 KIF1BPQ96EK5 621 aa17.67■□□□□ 0.42
GCC1-201ENST00000321407 CWC25Q9NXE8 425 aaPredicted RBP17.67■□□□□ 0.42
GCC1-201ENST00000321407 CLSTN1O94985 981 aa17.67■□□□□ 0.42
GCC1-201ENST00000321407 L1TD1Q5T7N2 865 aaKnown RBP17.67■□□□□ 0.42
GCC1-201ENST00000321407 MRPL50Q8N5N7 158 aaKnown RBP17.67■□□□□ 0.42
GCC1-201ENST00000321407 IQSEC3Q9UPP2 1182 aaPredicted RBP17.67■□□□□ 0.42
GCC1-201ENST00000321407 PLXNC1O60486 1568 aa17.67■□□□□ 0.42
GCC1-201ENST00000321407 RBM5P52756 815 aaKnown RBP eCLIP17.67■□□□□ 0.42
GCC1-201ENST00000321407 ZNF496Q96IT1 587 aaPredicted RBP17.67■□□□□ 0.42
GCC1-201ENST00000321407 RAI14Q9P0K7 980 aa17.67■□□□□ 0.42
GCC1-201ENST00000321407 PA2G4Q9UQ80 394 aaKnown RBP17.67■□□□□ 0.42
GCC1-201ENST00000321407 CLTCL1P53675 1640 aa17.67■□□□□ 0.42
GCC1-201ENST00000321407 ANKIB1Q9P2G1 1089 aa17.66■□□□□ 0.42
GCC1-201ENST00000321407 LRP2BPQ9P2M1 347 aa17.66■□□□□ 0.42
GCC1-201ENST00000321407 PTPRCP08575 1304 aa17.66■□□□□ 0.42
GCC1-201ENST00000321407 SBNO2Q9Y2G9 1366 aa17.66■□□□□ 0.42
GCC1-201ENST00000321407 SHROOM2Q13796 1616 aa17.66■□□□□ 0.42
GCC1-201ENST00000321407 ARHGAP31Q2M1Z3 1444 aa17.66■□□□□ 0.42
GCC1-201ENST00000321407 MX1P20591 662 aa17.65■□□□□ 0.42
GCC1-201ENST00000321407 LMBR1LQ6UX01 489 aa17.65■□□□□ 0.42
GCC1-201ENST00000321407 BRINP3Q76B58 766 aa17.65■□□□□ 0.42
GCC1-201ENST00000321407 NIP7Q9Y221 180 aaKnown RBP eCLIP17.65■□□□□ 0.42
GCC1-201ENST00000321407 SETD1BQ9UPS6 1966 aaKnown RBP17.65■□□□□ 0.42
GCC1-201ENST00000321407 NBPF5PQ86XG9 351 aaPredicted RBP17.65■□□□□ 0.42
GCC1-201ENST00000321407 TEX13AQ9BXU3 409 aaPredicted RBP17.65■□□□□ 0.42
GCC1-201ENST00000321407 GNL3LQ9NVN8 582 aaKnown RBP17.65■□□□□ 0.42
GCC1-201ENST00000321407 TET3O43151 1660 aa17.65■□□□□ 0.42
GCC1-201ENST00000321407 PCDH11XQ9BZA7 1347 aa17.64■□□□□ 0.41
GCC1-201ENST00000321407 PCDH11YQ9BZA8 1340 aa17.64■□□□□ 0.41
GCC1-201ENST00000321407 CPLX2Q6PUV4 134 aaKnown RBP17.64■□□□□ 0.41
GCC1-201ENST00000321407 DNAJC10Q8IXB1 793 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms