RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 UVSSAQ2YD98 709 aa15.21■□□□□ 0.03
DNMT3A-202ENST00000321117 CCDC73Q6ZRK6 1079 aa15.21■□□□□ 0.03
DNMT3A-202ENST00000321117 LARP6Q9BRS8 491 aaKnown RBP15.21■□□□□ 0.03
DNMT3A-202ENST00000321117 RAB11FIP3O75154 756 aa15.21■□□□□ 0.03
DNMT3A-202ENST00000321117 NUP62CLQ9H1M0 184 aa15.21■□□□□ 0.03
DNMT3A-202ENST00000321117 HIP1O00291 1037 aa15.2■□□□□ 0.02
DNMT3A-202ENST00000321117 TPD52L1Q16890 204 aaPredicted RBP15.2■□□□□ 0.02
DNMT3A-202ENST00000321117 STX6O43752 255 aa15.2■□□□□ 0.02
DNMT3A-202ENST00000321117 USP48Q86UV5 1035 aa15.2■□□□□ 0.02
DNMT3A-202ENST00000321117 NPATQ14207 1427 aa15.2■□□□□ 0.02
DNMT3A-202ENST00000321117 FERMT3Q86UX7 667 aa15.2■□□□□ 0.02
DNMT3A-202ENST00000321117 ERC1Q8IUD2 1116 aa15.2■□□□□ 0.02
DNMT3A-202ENST00000321117 YTHDC2Q9H6S0 1430 aaKnown RBP15.2■□□□□ 0.02
DNMT3A-202ENST00000321117 GNAT3A8MTJ3 354 aa15.2■□□□□ 0.02
DNMT3A-202ENST00000321117 IL13P35225 146 aa15.2■□□□□ 0.02
DNMT3A-202ENST00000321117 FOSBP53539 338 aa15.2■□□□□ 0.02
DNMT3A-202ENST00000321117 GLRX3O76003 335 aaKnown RBP15.19■□□□□ 0.02
DNMT3A-202ENST00000321117 GORABQ5T7V8 394 aa15.19■□□□□ 0.02
DNMT3A-202ENST00000321117 UBE2HP62256 183 aa15.19■□□□□ 0.02
DNMT3A-202ENST00000321117 PKP1Q13835 747 aa15.19■□□□□ 0.02
DNMT3A-202ENST00000321117 MAP3K11Q16584 847 aa15.19■□□□□ 0.02
DNMT3A-202ENST00000321117 BCL11BQ9C0K0 894 aaPredicted RBP15.19■□□□□ 0.02
DNMT3A-202ENST00000321117 MAP3K4Q9Y6R4 1608 aa15.19■□□□□ 0.02
DNMT3A-202ENST00000321117 MSH6P52701 1360 aa15.19■□□□□ 0.02
DNMT3A-202ENST00000321117 SHROOM2Q13796 1616 aa15.19■□□□□ 0.02
DNMT3A-202ENST00000321117 INTS4Q96HW7 963 aaKnown RBP15.19■□□□□ 0.02
DNMT3A-202ENST00000321117 ZNF830Q96NB3 372 aaPredicted RBP15.19■□□□□ 0.02
DNMT3A-202ENST00000321117 AIMP1Q12904 312 aaKnown RBP15.18■□□□□ 0.02
DNMT3A-202ENST00000321117 HSP90AB2PQ58FF8 381 aa15.18■□□□□ 0.02
DNMT3A-202ENST00000321117 BLOC1S2Q6QNY1 142 aa15.18■□□□□ 0.02
DNMT3A-202ENST00000321117 KIF1BO60333 1816 aa15.18■□□□□ 0.02
DNMT3A-202ENST00000321117 TET3O43151 1660 aa15.18■□□□□ 0.02
DNMT3A-202ENST00000321117 RIMS2Q9UQ26 1411 aa15.18■□□□□ 0.02
DNMT3A-202ENST00000321117 EIF4A2Q14240 407 aaKnown RBP15.18■□□□□ 0.02
DNMT3A-202ENST00000321117 CHMP4CQ96CF2 233 aa15.18■□□□□ 0.02
DNMT3A-202ENST00000321117 BRPF1P55201 1214 aaPredicted RBP15.18■□□□□ 0.02
DNMT3A-202ENST00000321117 ANKRD1Q15327 319 aa15.18■□□□□ 0.02
DNMT3A-202ENST00000321117 PRPF40BQ6NWY9 871 aaKnown RBP15.18■□□□□ 0.02
DNMT3A-202ENST00000321117 PRDM10Q9NQV6 1147 aa15.18■□□□□ 0.02
DNMT3A-202ENST00000321117 STK3Q13188 491 aa15.17■□□□□ 0.02
DNMT3A-202ENST00000321117 FBXW7Q969H0 707 aa15.17■□□□□ 0.02
DNMT3A-202ENST00000321117 PRIMPOLQ96LW4 560 aa15.17■□□□□ 0.02
DNMT3A-202ENST00000321117 TMEM63CQ9P1W3 806 aa15.17■□□□□ 0.02
DNMT3A-202ENST00000321117 PPP6R1Q9UPN7 881 aa15.17■□□□□ 0.02
DNMT3A-202ENST00000321117 SPG7Q9UQ90 795 aa15.17■□□□□ 0.02
DNMT3A-202ENST00000321117 PDCL2Q8N4E4 241 aa15.17■□□□□ 0.02
DNMT3A-202ENST00000321117 DDX54Q8TDD1 881 aaKnown RBP15.17■□□□□ 0.02
DNMT3A-202ENST00000321117 SPATA32Q96LK8 384 aa15.17■□□□□ 0.02
DNMT3A-202ENST00000321117 ZSCAN22P10073 491 aaPredicted RBP15.17■□□□□ 0.02
DNMT3A-202ENST00000321117 ABTB2Q8N961 1025 aa15.17■□□□□ 0.02
DNMT3A-202ENST00000321117 SH2B1Q9NRF2 756 aaPredicted RBP15.17■□□□□ 0.02
DNMT3A-202ENST00000321117 CNPY2Q9Y2B0 182 aa15.17■□□□□ 0.02
DNMT3A-202ENST00000321117 TERF1P54274 439 aa15.17■□□□□ 0.02
DNMT3A-202ENST00000321117 TTC21BQ7Z4L5 1316 aa15.16■□□□□ 0.02
DNMT3A-202ENST00000321117 SPHKAPQ2M3C7 1700 aa15.16■□□□□ 0.02
DNMT3A-202ENST00000321117 NOLC1Q14978 699 aaKnown RBP eCLIP15.16■□□□□ 0.02
DNMT3A-202ENST00000321117 AACSQ86V21 672 aa15.16■□□□□ 0.02
DNMT3A-202ENST00000321117 ERBB4Q15303 1308 aa15.16■□□□□ 0.02
DNMT3A-202ENST00000321117 CHMLP26374 656 aa15.16■□□□□ 0.02
DNMT3A-202ENST00000321117 CAMK4Q16566 473 aa15.16■□□□□ 0.02
DNMT3A-202ENST00000321117 PDIA4P13667 645 aaKnown RBP15.16■□□□□ 0.02
DNMT3A-202ENST00000321117 ATP8B2P98198 1209 aa15.16■□□□□ 0.02
DNMT3A-202ENST00000321117 TTC12Q9H892 705 aaPredicted RBP15.16■□□□□ 0.02
DNMT3A-202ENST00000321117 GIMAP6Q6P9H5 292 aa15.15■□□□□ 0.02
DNMT3A-202ENST00000321117 RIC3Q7Z5B4 369 aa15.15■□□□□ 0.02
DNMT3A-202ENST00000321117 SIRT2Q8IXJ6 389 aa15.15■□□□□ 0.02
DNMT3A-202ENST00000321117 CCDC112Q8NEF3 446 aa15.15■□□□□ 0.02
DNMT3A-202ENST00000321117 CSB-PGBD3P0DP91 1061 aa15.15■□□□□ 0.02
DNMT3A-202ENST00000321117 CEBPZQ03701 1054 aaKnown RBP15.15■□□□□ 0.02
DNMT3A-202ENST00000321117 TAF7Q15545 349 aaPredicted RBP15.15■□□□□ 0.02
DNMT3A-202ENST00000321117 PPP1R42Q7Z4L9 355 aa15.15■□□□□ 0.02
DNMT3A-202ENST00000321117 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.15■□□□□ 0.02
DNMT3A-202ENST00000321117 ZFYVE16Q7Z3T8 1539 aa15.15■□□□□ 0.02
DNMT3A-202ENST00000321117 KINO60870 393 aaKnown RBP15.15■□□□□ 0.02
DNMT3A-202ENST00000321117 SDF4Q9BRK5 362 aa15.15■□□□□ 0.02
DNMT3A-202ENST00000321117 IBTKQ9P2D0 1353 aaPredicted RBP15.15■□□□□ 0.02
DNMT3A-202ENST00000321117 GJB2P29033 226 aa15.14■□□□□ 0.02
DNMT3A-202ENST00000321117 CBX1P83916 185 aa15.14■□□□□ 0.01
DNMT3A-202ENST00000321117 KIF24Q5T7B8 1368 aa15.14■□□□□ 0.01
DNMT3A-202ENST00000321117 HOMER1Q86YM7 354 aa15.14■□□□□ 0.01
DNMT3A-202ENST00000321117 CHL1O00533 1208 aa15.13■□□□□ 0.01
DNMT3A-202ENST00000321117 RHPN1Q8TCX5 695 aa15.13■□□□□ 0.01
DNMT3A-202ENST00000321117 SLC26A8Q96RN1 970 aa15.13■□□□□ 0.01
DNMT3A-202ENST00000321117 G2E3Q7L622 706 aa15.13■□□□□ 0.01
DNMT3A-202ENST00000321117 SIL1Q9H173 461 aa15.13■□□□□ 0.01
DNMT3A-202ENST00000321117 GPT2Q8TD30 523 aa15.13■□□□□ 0.01
DNMT3A-202ENST00000321117 SCAND2PQ9GZW5 306 aaPredicted RBP15.13■□□□□ 0.01
DNMT3A-202ENST00000321117 IQGAP1P46940 1657 aa15.13■□□□□ 0.01
DNMT3A-202ENST00000321117 NAT10Q9H0A0 1025 aaKnown RBP15.12■□□□□ 0.01
DNMT3A-202ENST00000321117 ACEP12821 1306 aa15.12■□□□□ 0.01
DNMT3A-202ENST00000321117 ZNF500O60304 480 aaPredicted RBP15.12■□□□□ 0.01
DNMT3A-202ENST00000321117 CKAP2LQ8IYA6 745 aa15.12■□□□□ 0.01
DNMT3A-202ENST00000321117 CHAMP1Q96JM3 812 aa15.12■□□□□ 0.01
DNMT3A-202ENST00000321117 BRD1O95696 1058 aa15.12■□□□□ 0.01
DNMT3A-202ENST00000321117 ZNF330Q9Y3S2 320 aaPredicted RBP15.11■□□□□ 0.01
DNMT3A-202ENST00000321117 NCKAP5LQ9HCH0 1330 aa15.11■□□□□ 0.01
DNMT3A-202ENST00000321117 ABCA6Q8N139 1617 aa15.11■□□□□ 0.01
DNMT3A-202ENST00000321117 CPLX1O14810 134 aa15.11■□□□□ 0.01
DNMT3A-202ENST00000321117 F13A1P00488 732 aa15.11■□□□□ 0.01
DNMT3A-202ENST00000321117 ZNF530Q6P9A1 599 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms