RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 FGD6Q6ZV73 1430 aa10.39□□□□□ -0.75
SSBP2-201ENST00000320672 RABEP1Q15276 862 aa10.39□□□□□ -0.75
SSBP2-201ENST00000320672 EIF5P55010 431 aaKnown RBP10.39□□□□□ -0.75
SSBP2-201ENST00000320672 SCLT1Q96NL6 688 aa10.39□□□□□ -0.75
SSBP2-201ENST00000320672 IGSF3O75054 1194 aa10.39□□□□□ -0.75
SSBP2-201ENST00000320672 IFIT1P09914 478 aaKnown RBP10.39□□□□□ -0.75
SSBP2-201ENST00000320672 MCM4P33991 863 aa10.39□□□□□ -0.75
SSBP2-201ENST00000320672 CCDC24Q8N4L8 307 aa10.39□□□□□ -0.75
SSBP2-201ENST00000320672 NUP62CLQ9H1M0 184 aa10.39□□□□□ -0.75
SSBP2-201ENST00000320672 TXLNAP40222 546 aa10.39□□□□□ -0.75
SSBP2-201ENST00000320672 CCDC96Q2M329 555 aa10.39□□□□□ -0.75
SSBP2-201ENST00000320672 GCC1Q96CN9 775 aa10.39□□□□□ -0.75
SSBP2-201ENST00000320672 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.38□□□□□ -0.758e-7■■■■■ 37.5
SSBP2-201ENST00000320672 TRIM22Q8IYM9 498 aa10.38□□□□□ -0.75
SSBP2-201ENST00000320672 SMARCE1Q969G3 411 aa10.38□□□□□ -0.75
SSBP2-201ENST00000320672 RTEL1-TNFRSF6BF6WH68 1400 aa10.38□□□□□ -0.75
SSBP2-201ENST00000320672 GOLIM4O00461 696 aa10.38□□□□□ -0.75
SSBP2-201ENST00000320672 ATP2C2O75185 946 aa10.38□□□□□ -0.75
SSBP2-201ENST00000320672 KRT85P78386 507 aa10.38□□□□□ -0.75
SSBP2-201ENST00000320672 CCDC173Q0VFZ6 552 aa10.38□□□□□ -0.75
SSBP2-201ENST00000320672 AKNAD1Q5T1N1 836 aa10.38□□□□□ -0.75
SSBP2-201ENST00000320672 MKNK2Q9HBH9 465 aa10.38□□□□□ -0.75
SSBP2-201ENST00000320672 GOPCQ9HD26 462 aa10.38□□□□□ -0.75
SSBP2-201ENST00000320672 TRMT112Q9UI30 125 aaKnown RBP10.38□□□□□ -0.75
SSBP2-201ENST00000320672 CCDC192P0DO97 292 aa10.38□□□□□ -0.75
SSBP2-201ENST00000320672 CRACR2BQ8N4Y2 399 aaPredicted RBP10.37□□□□□ -0.75
SSBP2-201ENST00000320672 CCDC112Q8NEF3 446 aa10.37□□□□□ -0.75
SSBP2-201ENST00000320672 SMARCA4P51532 1647 aa10.37□□□□□ -0.75
SSBP2-201ENST00000320672 URI1O94763 535 aaPredicted RBP10.37□□□□□ -0.75
SSBP2-201ENST00000320672 SLC3A2P08195 630 aaKnown RBP10.37□□□□□ -0.75
SSBP2-201ENST00000320672 KIAA1328Q86T90 577 aa10.37□□□□□ -0.75
SSBP2-201ENST00000320672 AEBP1Q8IUX7 1158 aa10.37□□□□□ -0.75
SSBP2-201ENST00000320672 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.37□□□□□ -0.75
SSBP2-201ENST00000320672 V9GYY5 206 aaPredicted RBP10.37□□□□□ -0.75
SSBP2-201ENST00000320672 CTNNBL1Q8WYA6 563 aaPredicted RBP10.37□□□□□ -0.75
SSBP2-201ENST00000320672 GNL3LQ9NVN8 582 aaKnown RBP10.37□□□□□ -0.75
SSBP2-201ENST00000320672 RBM26Q5T8P6 1007 aaKnown RBP10.37□□□□□ -0.75
SSBP2-201ENST00000320672 HELBQ8NG08 1087 aaPredicted RBP10.37□□□□□ -0.75
SSBP2-201ENST00000320672 PLIN2Q99541 437 aa10.37□□□□□ -0.75
SSBP2-201ENST00000320672 NACAP1Q9BZK3 213 aa10.37□□□□□ -0.75
SSBP2-201ENST00000320672 GNAT3A8MTJ3 354 aa10.36□□□□□ -0.75
SSBP2-201ENST00000320672 ARHGAP5Q13017 1502 aa10.36□□□□□ -0.75
SSBP2-201ENST00000320672 C6orf229H3BNL8 230 aa10.36□□□□□ -0.75
SSBP2-201ENST00000320672 RXRAP19793 462 aa10.36□□□□□ -0.75
SSBP2-201ENST00000320672 NCKAP5LQ9HCH0 1330 aa10.36□□□□□ -0.75
SSBP2-201ENST00000320672 SLFN5Q08AF3 891 aa10.36□□□□□ -0.75
SSBP2-201ENST00000320672 PA2G4Q9UQ80 394 aaKnown RBP10.36□□□□□ -0.75
SSBP2-201ENST00000320672 NSD3Q9BZ95 1437 aa10.36□□□□□ -0.75
SSBP2-201ENST00000320672 PRDM2Q13029 1718 aa10.36□□□□□ -0.75
SSBP2-201ENST00000320672 USP8P40818 1118 aa10.36□□□□□ -0.75
SSBP2-201ENST00000320672 CCT4P50991 539 aaKnown RBP10.36□□□□□ -0.75
SSBP2-201ENST00000320672 WWC2Q6AWC2 1192 aa10.36□□□□□ -0.75
SSBP2-201ENST00000320672 RGS22Q8NE09 1264 aa10.36□□□□□ -0.75
SSBP2-201ENST00000320672 FGD5Q6ZNL6 1462 aa10.35□□□□□ -0.75
SSBP2-201ENST00000320672 IGHMBP2P38935 993 aaKnown RBP10.35□□□□□ -0.75
SSBP2-201ENST00000320672 SEPT7Q16181 437 aaKnown RBP10.35□□□□□ -0.75
SSBP2-201ENST00000320672 ZNHIT6Q9NWK9 470 aaKnown RBP10.35□□□□□ -0.75
SSBP2-201ENST00000320672 ZHX1Q9UKY1 873 aaPredicted RBP10.35□□□□□ -0.75
SSBP2-201ENST00000320672 MAP3K2Q9Y2U5 619 aa10.35□□□□□ -0.75
SSBP2-201ENST00000320672 LRRC9Q6ZRR7 1453 aa10.35□□□□□ -0.75
SSBP2-201ENST00000320672 MX1P20591 662 aa10.35□□□□□ -0.75
SSBP2-201ENST00000320672 DDX46Q7L014 1031 aaKnown RBP10.35□□□□□ -0.75
SSBP2-201ENST00000320672 C16orf45Q96MC5 204 aaPredicted RBP10.35□□□□□ -0.75
SSBP2-201ENST00000320672 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.35□□□□□ -0.75
SSBP2-201ENST00000320672 ADGRF5Q8IZF2 1346 aa10.35□□□□□ -0.75
SSBP2-201ENST00000320672 BRD4O60885 1362 aaPredicted RBP10.35□□□□□ -0.75
SSBP2-201ENST00000320672 A0A087WZG4 1122 aa10.35□□□□□ -0.75
SSBP2-201ENST00000320672 GIMAP6Q6P9H5 292 aa10.35□□□□□ -0.75
SSBP2-201ENST00000320672 CEP57L1Q8IYX8 460 aa10.35□□□□□ -0.75
SSBP2-201ENST00000320672 LRRC59Q96AG4 307 aaKnown RBP10.34□□□□□ -0.75
SSBP2-201ENST00000320672 CCDC178Q5BJE1 867 aa10.34□□□□□ -0.75
SSBP2-201ENST00000320672 WDR33Q9C0J8 1336 aaKnown RBP10.34□□□□□ -0.75
SSBP2-201ENST00000320672 CA8P35219 290 aa10.34□□□□□ -0.75
SSBP2-201ENST00000320672 DRC1Q96MC2 740 aa10.34□□□□□ -0.75
SSBP2-201ENST00000320672 TMOD3Q9NYL9 352 aa10.34□□□□□ -0.75
SSBP2-201ENST00000320672 RAB11FIP3O75154 756 aa10.34□□□□□ -0.75
SSBP2-201ENST00000320672 SF3A3Q12874 501 aaKnown RBP eCLIP10.34□□□□□ -0.75
SSBP2-201ENST00000320672 NFE2L2Q16236 605 aa10.34□□□□□ -0.75
SSBP2-201ENST00000320672 ERC1Q8IUD2 1116 aa10.34□□□□□ -0.75
SSBP2-201ENST00000320672 PLS1Q14651 629 aa10.34□□□□□ -0.75
SSBP2-201ENST00000320672 NCOA2Q15596 1464 aa10.34□□□□□ -0.75
SSBP2-201ENST00000320672 MIA2Q96PC5 1412 aa10.34□□□□□ -0.75
SSBP2-201ENST00000320672 ERBINQ96RT1 1412 aa10.34□□□□□ -0.75
SSBP2-201ENST00000320672 MICU3Q86XE3 530 aa10.34□□□□□ -0.75
SSBP2-201ENST00000320672 NEBLO76041 1014 aa10.34□□□□□ -0.75
SSBP2-201ENST00000320672 TBC1D2Q9BYX2 928 aa10.34□□□□□ -0.75
SSBP2-201ENST00000320672 MYOM3Q5VTT5 1437 aa10.33□□□□□ -0.76
SSBP2-201ENST00000320672 IMMTQ16891 758 aaKnown RBP10.33□□□□□ -0.76
SSBP2-201ENST00000320672 IDEP14735 1019 aa10.33□□□□□ -0.76
SSBP2-201ENST00000320672 CPA1P15085 419 aa10.33□□□□□ -0.76
SSBP2-201ENST00000320672 PICALMQ13492 652 aa10.33□□□□□ -0.76
SSBP2-201ENST00000320672 UBE4AQ14139 1066 aa10.33□□□□□ -0.76
SSBP2-201ENST00000320672 FKBP15Q5T1M5 1219 aa10.33□□□□□ -0.76
SSBP2-201ENST00000320672 FAM107BQ9H098 131 aa10.33□□□□□ -0.76
SSBP2-201ENST00000320672 RRBP1Q9P2E9 1410 aaKnown RBP10.33□□□□□ -0.76
SSBP2-201ENST00000320672 ERCC3P19447 782 aa10.33□□□□□ -0.76
SSBP2-201ENST00000320672 GJB2P29033 226 aa10.33□□□□□ -0.76
SSBP2-201ENST00000320672 DZIP1Q86YF9 867 aaKnown RBP10.33□□□□□ -0.76
SSBP2-201ENST00000320672 IFIT3O14879 490 aaKnown RBP10.33□□□□□ -0.76
SSBP2-201ENST00000320672 RARSP54136 660 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms