RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 SLC4A9Q96Q91 983 aa13.37□□□□□ -0.27
CCDC65-202ENST00000320516 U2SURPO15042 1029 aaKnown RBP13.36□□□□□ -0.27
CCDC65-202ENST00000320516 NFATC2IPQ8NCF5 419 aa13.36□□□□□ -0.27
CCDC65-202ENST00000320516 LINC00116Q8NCU8 138 aa13.36□□□□□ -0.27
CCDC65-202ENST00000320516 CFAP53Q96M91 514 aa13.36□□□□□ -0.27
CCDC65-202ENST00000320516 ADAMTS7Q9UKP4 1686 aa13.36□□□□□ -0.27
CCDC65-202ENST00000320516 AMIGO3Q86WK7 504 aa13.35□□□□□ -0.27
CCDC65-202ENST00000320516 LGR6Q9HBX8 967 aa13.35□□□□□ -0.27
CCDC65-202ENST00000320516 ZNF831Q5JPB2 1677 aa13.35□□□□□ -0.27
CCDC65-202ENST00000320516 ATP6V1AP38606 617 aa13.35□□□□□ -0.27
CCDC65-202ENST00000320516 MRC1P22897 1456 aa13.34□□□□□ -0.27
CCDC65-202ENST00000320516 RNMTO43148 476 aaKnown RBP13.34□□□□□ -0.27
CCDC65-202ENST00000320516 RSPH6AQ9H0K4 717 aa13.34□□□□□ -0.27
CCDC65-202ENST00000320516 UBR3Q6ZT12 1888 aa13.33□□□□□ -0.27
CCDC65-202ENST00000320516 ADRA2BP18089 450 aa13.33□□□□□ -0.28
CCDC65-202ENST00000320516 FLAD1Q8NFF5 587 aa13.33□□□□□ -0.28
CCDC65-202ENST00000320516 SLC52A2Q9HAB3 445 aa13.33□□□□□ -0.28
CCDC65-202ENST00000320516 AK7Q96M32 723 aa13.32□□□□□ -0.28
CCDC65-202ENST00000320516 ARXQ96QS3 562 aa13.32□□□□□ -0.28
CCDC65-202ENST00000320516 NUDCQ9Y266 331 aa13.32□□□□□ -0.28
CCDC65-202ENST00000320516 SMIM5Q71RC9 77 aa13.32□□□□□ -0.28
CCDC65-202ENST00000320516 PHACTR3Q96KR7 559 aa13.32□□□□□ -0.28
CCDC65-202ENST00000320516 SYT17Q9BSW7 474 aa13.32□□□□□ -0.28
CCDC65-202ENST00000320516 RBM42Q9BTD8 480 aaKnown RBP13.32□□□□□ -0.28
CCDC65-202ENST00000320516 FHDC1Q9C0D6 1143 aaPredicted RBP13.32□□□□□ -0.28
CCDC65-202ENST00000320516 MAP3K5Q99683 1374 aa13.31□□□□□ -0.28
CCDC65-202ENST00000320516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.31□□□□□ -0.28
CCDC65-202ENST00000320516 COL5A3P25940 1745 aaPredicted RBP13.31□□□□□ -0.28
CCDC65-202ENST00000320516 SSFA2P28290 1259 aa13.31□□□□□ -0.28
CCDC65-202ENST00000320516 PRKAR2BP31323 418 aa13.31□□□□□ -0.28
CCDC65-202ENST00000320516 DDX10Q13206 875 aaKnown RBP13.31□□□□□ -0.28
CCDC65-202ENST00000320516 GAS2L2Q8NHY3 880 aa13.31□□□□□ -0.28
CCDC65-202ENST00000320516 VIRMAQ69YN4 1812 aaKnown RBP13.31□□□□□ -0.28
CCDC65-202ENST00000320516 MSH5O43196 834 aa13.3□□□□□ -0.28
CCDC65-202ENST00000320516 CICQ96RK0 1608 aaPredicted RBP13.3□□□□□ -0.28
CCDC65-202ENST00000320516 GNPATO15228 680 aa13.3□□□□□ -0.28
CCDC65-202ENST00000320516 PTCD1O75127 700 aaKnown RBP13.3□□□□□ -0.28
CCDC65-202ENST00000320516 FCHSD2O94868 740 aa13.3□□□□□ -0.28
CCDC65-202ENST00000320516 U2AF1L5P0DN76 240 aaPredicted RBP13.3□□□□□ -0.28
CCDC65-202ENST00000320516 POLD1P28340 1107 aa13.3□□□□□ -0.28
CCDC65-202ENST00000320516 U2AF1Q01081 240 aaKnown RBP eCLIP13.3□□□□□ -0.28
CCDC65-202ENST00000320516 RC3H1Q5TC82 1133 aaKnown RBP13.3□□□□□ -0.28
CCDC65-202ENST00000320516 IL17REQ8NFR9 667 aa13.3□□□□□ -0.28
CCDC65-202ENST00000320516 CNTNAP4Q9C0A0 1308 aa13.29□□□□□ -0.28
CCDC65-202ENST00000320516 GNAT3A8MTJ3 354 aa13.29□□□□□ -0.28
CCDC65-202ENST00000320516 PHF14O94880 888 aa13.29□□□□□ -0.28
CCDC65-202ENST00000320516 RALBP1Q15311 655 aa13.28□□□□□ -0.28
CCDC65-202ENST00000320516 MSL1Q68DK7 614 aa13.28□□□□□ -0.28
CCDC65-202ENST00000320516 TJP1Q07157 1748 aa13.28□□□□□ -0.28
CCDC65-202ENST00000320516 KCPQ6ZWJ8 1503 aa13.28□□□□□ -0.28
CCDC65-202ENST00000320516 MYH14Q7Z406 1995 aaKnown RBP13.28□□□□□ -0.28
CCDC65-202ENST00000320516 CEMIPQ8WUJ3 1361 aa13.27□□□□□ -0.28
CCDC65-202ENST00000320516 SLC39A6Q13433 755 aa13.27□□□□□ -0.28
CCDC65-202ENST00000320516 ZEB1P37275 1124 aaPredicted RBP13.27□□□□□ -0.29
CCDC65-202ENST00000320516 RTCBQ9Y3I0 505 aaKnown RBP13.27□□□□□ -0.29
CCDC65-202ENST00000320516 RPS6KA4O75676 772 aa13.26□□□□□ -0.29
CCDC65-202ENST00000320516 SIPA1L3O60292 1781 aaPredicted RBP13.26□□□□□ -0.29
CCDC65-202ENST00000320516 UBR2Q8IWV8 1755 aa13.25□□□□□ -0.29
CCDC65-202ENST00000320516 UTRNP46939 3433 aa13.25□□□□□ -0.29
CCDC65-202ENST00000320516 CRKLP46109 303 aaKnown RBP13.25□□□□□ -0.29
CCDC65-202ENST00000320516 TRAPPC3LQ5T215 181 aa13.25□□□□□ -0.29
CCDC65-202ENST00000320516 DNAJC10Q8IXB1 793 aa13.25□□□□□ -0.29
CCDC65-202ENST00000320516 TEFQ10587 303 aa13.24□□□□□ -0.29
CCDC65-202ENST00000320516 INTS5Q6P9B9 1019 aaKnown RBP13.24□□□□□ -0.29
CCDC65-202ENST00000320516 ARHGEF1Q92888 912 aaKnown RBP13.24□□□□□ -0.29
CCDC65-202ENST00000320516 PLEKHF1Q96S99 279 aa13.24□□□□□ -0.29
CCDC65-202ENST00000320516 VSIG10Q8N0Z9 540 aa13.23□□□□□ -0.29
CCDC65-202ENST00000320516 CYP19A1P11511 503 aaPredicted RBP13.22□□□□□ -0.29
CCDC65-202ENST00000320516 ZNF790Q6PG37 636 aa13.22□□□□□ -0.29
CCDC65-202ENST00000320516 NLGN2Q8NFZ4 835 aa13.22□□□□□ -0.29
CCDC65-202ENST00000320516 HTATSF1O43719 755 aaKnown RBP13.22□□□□□ -0.29
CCDC65-202ENST00000320516 KLHL34Q8N239 644 aa13.22□□□□□ -0.29
CCDC65-202ENST00000320516 ZNF496Q96IT1 587 aaPredicted RBP13.22□□□□□ -0.29
CCDC65-202ENST00000320516 MYBBP1AQ9BQG0 1328 aaKnown RBP13.22□□□□□ -0.29
CCDC65-202ENST00000320516 C4AP0C0L4 1744 aa13.21□□□□□ -0.29
CCDC65-202ENST00000320516 DCAF8L1A6NGE4 600 aa13.21□□□□□ -0.29
CCDC65-202ENST00000320516 MCM10Q7L590 875 aa13.21□□□□□ -0.29
CCDC65-202ENST00000320516 TTC5Q8N0Z6 440 aa13.21□□□□□ -0.29
CCDC65-202ENST00000320516 CCDC87Q9NVE4 849 aa13.21□□□□□ -0.29
CCDC65-202ENST00000320516 CD2APQ9Y5K6 639 aa13.21□□□□□ -0.29
CCDC65-202ENST00000320516 GYS1P13807 737 aa13.2□□□□□ -0.3
CCDC65-202ENST00000320516 RFC4P35249 363 aa13.2□□□□□ -0.3
CCDC65-202ENST00000320516 DCTN1Q14203 1278 aa13.2□□□□□ -0.3
CCDC65-202ENST00000320516 GOLGB1Q14789 3259 aaKnown RBP13.2□□□□□ -0.3
CCDC65-202ENST00000320516 SOS1Q07889 1333 aaPredicted RBP13.2□□□□□ -0.3
CCDC65-202ENST00000320516 HEG1Q9ULI3 1381 aa13.2□□□□□ -0.3
CCDC65-202ENST00000320516 KCNQ3O43525 872 aa13.2□□□□□ -0.3
CCDC65-202ENST00000320516 NLGN1Q8N2Q7 840 aa13.2□□□□□ -0.3
CCDC65-202ENST00000320516 RTF1Q92541 710 aaKnown RBP13.2□□□□□ -0.3
CCDC65-202ENST00000320516 PRKRIP1Q9H875 184 aaPredicted RBP13.2□□□□□ -0.3
CCDC65-202ENST00000320516 BTBD11A6QL63 1104 aa13.19□□□□□ -0.3
CCDC65-202ENST00000320516 MMP10P09238 476 aa13.19□□□□□ -0.3
CCDC65-202ENST00000320516 USP42Q9H9J4 1324 aaKnown RBP13.19□□□□□ -0.3
CCDC65-202ENST00000320516 ZBTB1Q9Y2K1 713 aa13.19□□□□□ -0.3
CCDC65-202ENST00000320516 SRP68Q9UHB9 627 aaKnown RBP13.18□□□□□ -0.3
CCDC65-202ENST00000320516 DLG5Q8TDM6 1919 aa13.17□□□□□ -0.3
CCDC65-202ENST00000320516 NEFMP07197 916 aa13.17□□□□□ -0.3
CCDC65-202ENST00000320516 NFE2L2Q16236 605 aa13.17□□□□□ -0.3
CCDC65-202ENST00000320516 FMNL2Q96PY5 1086 aa13.17□□□□□ -0.3
CCDC65-202ENST00000320516 PNNQ9H307 717 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms