RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 SEPT12Q8IYM1 358 aa17.71■□□□□ 0.43
PRPF18-201ENST00000320054 MARCH10Q8NA82 808 aaPredicted RBP17.71■□□□□ 0.43
PRPF18-201ENST00000320054 PAPPAQ13219 1627 aa17.71■□□□□ 0.43
PRPF18-201ENST00000320054 A0A0G2JS52 829 aa17.7■□□□□ 0.42
PRPF18-201ENST00000320054 RXRBP28702 533 aa17.7■□□□□ 0.42
PRPF18-201ENST00000320054 MYT1Q01538 1121 aa17.7■□□□□ 0.42
PRPF18-201ENST00000320054 SLC52A2Q9HAB3 445 aa17.7■□□□□ 0.42
PRPF18-201ENST00000320054 BCL9O00512 1426 aa17.7■□□□□ 0.42
PRPF18-201ENST00000320054 UBR2Q8IWV8 1755 aa17.69■□□□□ 0.42
PRPF18-201ENST00000320054 FANCIQ9NVI1 1328 aa17.69■□□□□ 0.42
PRPF18-201ENST00000320054 NHSQ6T4R5 1651 aa17.68■□□□□ 0.42
PRPF18-201ENST00000320054 LAS1LQ9Y4W2 734 aaKnown RBP17.68■□□□□ 0.42
PRPF18-201ENST00000320054 CABP4P57796 275 aa17.67■□□□□ 0.42
PRPF18-201ENST00000320054 POTEAQ6S8J7 498 aa17.67■□□□□ 0.42
PRPF18-201ENST00000320054 MBIPQ9NS73 344 aa17.67■□□□□ 0.42
PRPF18-201ENST00000320054 NFATC2IPQ8NCF5 419 aa17.66■□□□□ 0.42
PRPF18-201ENST00000320054 TSR2Q969E8 191 aaKnown RBP17.66■□□□□ 0.42
PRPF18-201ENST00000320054 TSPYL4Q9UJ04 414 aa17.66■□□□□ 0.42
PRPF18-201ENST00000320054 BTBD11A6QL63 1104 aa17.65■□□□□ 0.42
PRPF18-201ENST00000320054 RGS12O14924 1447 aa17.64■□□□□ 0.42
PRPF18-201ENST00000320054 CACNA1FO60840 1977 aa17.64■□□□□ 0.41
PRPF18-201ENST00000320054 CT47B1P0C2W7 299 aaPredicted RBP17.63■□□□□ 0.41
PRPF18-201ENST00000320054 TMOD3Q9NYL9 352 aa17.63■□□□□ 0.41
PRPF18-201ENST00000320054 MIS18AQ9NYP9 233 aa17.63■□□□□ 0.41
PRPF18-201ENST00000320054 BTAF1O14981 1849 aa17.63■□□□□ 0.41
PRPF18-201ENST00000320054 EXOSC9Q06265 439 aaKnown RBP17.62■□□□□ 0.41
PRPF18-201ENST00000320054 KRT27Q7Z3Y8 459 aa17.62■□□□□ 0.41
PRPF18-201ENST00000320054 SOS1Q07889 1333 aaPredicted RBP17.61■□□□□ 0.41
PRPF18-201ENST00000320054 LAMB4A4D0S4 1761 aa17.61■□□□□ 0.41
PRPF18-201ENST00000320054 PRIM1P49642 420 aaKnown RBP17.6■□□□□ 0.41
PRPF18-201ENST00000320054 ZNF790Q6PG37 636 aa17.6■□□□□ 0.41
PRPF18-201ENST00000320054 PIGBQ92521 554 aa17.6■□□□□ 0.41
PRPF18-201ENST00000320054 HEG1Q9ULI3 1381 aa17.6■□□□□ 0.41
PRPF18-201ENST00000320054 C5P01031 1676 aa17.6■□□□□ 0.41
PRPF18-201ENST00000320054 ZNF831Q5JPB2 1677 aa17.59■□□□□ 0.41
PRPF18-201ENST00000320054 KCPQ6ZWJ8 1503 aa17.59■□□□□ 0.41
PRPF18-201ENST00000320054 EIF4A1P60842 406 aaKnown RBP17.59■□□□□ 0.41
PRPF18-201ENST00000320054 CICQ96RK0 1608 aaPredicted RBP17.58■□□□□ 0.41
PRPF18-201ENST00000320054 FAM196AQ6ZSG2 479 aa17.58■□□□□ 0.4
PRPF18-201ENST00000320054 C8orf58Q8NAV2 365 aa17.58■□□□□ 0.4
PRPF18-201ENST00000320054 ZNF428Q96B54 188 aa17.58■□□□□ 0.4
PRPF18-201ENST00000320054 KCNQ3O43525 872 aa17.57■□□□□ 0.4
PRPF18-201ENST00000320054 SLC39A6Q13433 755 aa17.57■□□□□ 0.4
PRPF18-201ENST00000320054 TWISTNBQ3B726 338 aaPredicted RBP17.57■□□□□ 0.4
PRPF18-201ENST00000320054 TTC5Q8N0Z6 440 aa17.57■□□□□ 0.4
PRPF18-201ENST00000320054 ACSBG1Q96GR2 724 aa17.57■□□□□ 0.4
PRPF18-201ENST00000320054 LY75O60449 1722 aa17.56■□□□□ 0.4
PRPF18-201ENST00000320054 VAMP4O75379 141 aa17.56■□□□□ 0.4
PRPF18-201ENST00000320054 HOXB7P09629 217 aa17.56■□□□□ 0.4
PRPF18-201ENST00000320054 FAM182BQ5T319 152 aa17.56■□□□□ 0.4
PRPF18-201ENST00000320054 SYTL4Q96C24 671 aaPredicted RBP17.56■□□□□ 0.4
PRPF18-201ENST00000320054 ATG3Q9NT62 314 aa17.56■□□□□ 0.4
PRPF18-201ENST00000320054 TSPYL6Q8N831 410 aa17.55■□□□□ 0.4
PRPF18-201ENST00000320054 FMNL2Q96PY5 1086 aa17.55■□□□□ 0.4
PRPF18-201ENST00000320054 RCAN3Q9UKA8 241 aa17.55■□□□□ 0.4
PRPF18-201ENST00000320054 KCNQ2O43526 872 aa17.54■□□□□ 0.4
PRPF18-201ENST00000320054 KRT24Q2M2I5 525 aa17.54■□□□□ 0.4
PRPF18-201ENST00000320054 ZNF496Q96IT1 587 aaPredicted RBP17.54■□□□□ 0.4
PRPF18-201ENST00000320054 CHMP4AQ9BY43 222 aa17.54■□□□□ 0.4
PRPF18-201ENST00000320054 ASAP1Q9ULH1 1129 aa17.54■□□□□ 0.4
PRPF18-201ENST00000320054 TJP1Q07157 1748 aa17.54■□□□□ 0.4
PRPF18-201ENST00000320054 GIGYF1O75420 1035 aaPredicted RBP17.53■□□□□ 0.4
PRPF18-201ENST00000320054 SMARCC1Q92922 1105 aaPredicted RBP17.53■□□□□ 0.4
PRPF18-201ENST00000320054 TNS1Q9HBL0 1735 aaKnown RBP17.52■□□□□ 0.4
PRPF18-201ENST00000320054 ELL2O00472 640 aaPredicted RBP17.52■□□□□ 0.4
PRPF18-201ENST00000320054 RARSP54136 660 aaKnown RBP17.52■□□□□ 0.4
PRPF18-201ENST00000320054 ALDH1L2Q3SY69 923 aa17.52■□□□□ 0.4
PRPF18-201ENST00000320054 VSIG10Q8N0Z9 540 aa17.52■□□□□ 0.4
PRPF18-201ENST00000320054 BCL11BQ9C0K0 894 aaPredicted RBP17.52■□□□□ 0.4
PRPF18-201ENST00000320054 SNRPA1P09661 255 aaKnown RBP17.51■□□□□ 0.39
PRPF18-201ENST00000320054 COL5A3P25940 1745 aaPredicted RBP17.5■□□□□ 0.39
PRPF18-201ENST00000320054 RGPD3A6NKT7 1758 aaPredicted RBP17.5■□□□□ 0.39
PRPF18-201ENST00000320054 RGPD4Q7Z3J3 1758 aa17.5■□□□□ 0.39
PRPF18-201ENST00000320054 TAF1LQ8IZX4 1826 aa17.49■□□□□ 0.39
PRPF18-201ENST00000320054 PALLDQ8WX93 1383 aa17.49■□□□□ 0.39
PRPF18-201ENST00000320054 PTCD1O75127 700 aaKnown RBP17.48■□□□□ 0.39
PRPF18-201ENST00000320054 BRPF1P55201 1214 aaPredicted RBP17.48■□□□□ 0.39
PRPF18-201ENST00000320054 CCDC30Q5VVM6 783 aa17.48■□□□□ 0.39
PRPF18-201ENST00000320054 PTF1AQ7RTS3 328 aa17.48■□□□□ 0.39
PRPF18-201ENST00000320054 SSH1Q8WYL5 1049 aa17.48■□□□□ 0.39
PRPF18-201ENST00000320054 TEX13AQ9BXU3 409 aaPredicted RBP17.48■□□□□ 0.39
PRPF18-201ENST00000320054 RNF123Q5XPI4 1314 aa17.47■□□□□ 0.39
PRPF18-201ENST00000320054 HDGFL1Q5TGJ6 251 aa17.47■□□□□ 0.39
PRPF18-201ENST00000320054 RREB1Q92766 1687 aa17.47■□□□□ 0.39
PRPF18-201ENST00000320054 TRIM37O94972 964 aa17.46■□□□□ 0.39
PRPF18-201ENST00000320054 RBM42Q9BTD8 480 aaKnown RBP17.46■□□□□ 0.39
PRPF18-201ENST00000320054 SMC4Q9NTJ3 1288 aa17.46■□□□□ 0.39
PRPF18-201ENST00000320054 EP400Q96L91 3159 aa17.45■□□□□ 0.38
PRPF18-201ENST00000320054 LOC102724428A0A0B4J2F2 783 aa17.45■□□□□ 0.38
PRPF18-201ENST00000320054 PRAMEF22A3QJZ6 481 aa17.45■□□□□ 0.38
PRPF18-201ENST00000320054 BCAR3O75815 825 aa17.45■□□□□ 0.38
PRPF18-201ENST00000320054 SIK1P57059 783 aa17.45■□□□□ 0.38
PRPF18-201ENST00000320054 MRPL50Q8N5N7 158 aaKnown RBP17.45■□□□□ 0.38
PRPF18-201ENST00000320054 SLC4A9Q96Q91 983 aa17.45■□□□□ 0.38
PRPF18-201ENST00000320054 STK31Q9BXU1 1019 aa17.45■□□□□ 0.38
PRPF18-201ENST00000320054 SUPT16HQ9Y5B9 1047 aaKnown RBP17.45■□□□□ 0.38
PRPF18-201ENST00000320054 ERBB4Q15303 1308 aa17.45■□□□□ 0.38
PRPF18-201ENST00000320054 EIF2S2P20042 333 aaKnown RBP17.44■□□□□ 0.38
PRPF18-201ENST00000320054 USP16Q9Y5T5 823 aa17.44■□□□□ 0.38
PRPF18-201ENST00000320054 MYH14Q7Z406 1995 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms