RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 AK9Q5TCS8 1911 aa25.6■■□□□ 1.69
CPNE7-202ENST00000319518 NWD1Q149M9 1564 aa25.58■■□□□ 1.69
CPNE7-202ENST00000319518 APBB1O00213 710 aa25.58■■□□□ 1.69
CPNE7-202ENST00000319518 BAG4O95429 457 aaKnown RBP25.58■■□□□ 1.69
CPNE7-202ENST00000319518 PTPRCP08575 1304 aa25.57■■□□□ 1.68
CPNE7-202ENST00000319518 ERBB4Q15303 1308 aa25.57■■□□□ 1.68
CPNE7-202ENST00000319518 TSPYL4Q9UJ04 414 aa25.57■■□□□ 1.68
CPNE7-202ENST00000319518 USP54Q70EL1 1684 aa25.56■■□□□ 1.68
CPNE7-202ENST00000319518 LTN1O94822 1766 aa25.55■■□□□ 1.68
CPNE7-202ENST00000319518 SLC4A2P04920 1241 aa25.55■■□□□ 1.68
CPNE7-202ENST00000319518 PTMSP20962 102 aa25.55■■□□□ 1.68
CPNE7-202ENST00000319518 CYP2E1P05181 493 aaPredicted RBP25.54■■□□□ 1.68
CPNE7-202ENST00000319518 PRKCSHP14314 528 aaPredicted RBP25.54■■□□□ 1.68
CPNE7-202ENST00000319518 PKP1Q13835 747 aa25.54■■□□□ 1.68
CPNE7-202ENST00000319518 LMOD2Q6P5Q4 547 aa25.54■■□□□ 1.68
CPNE7-202ENST00000319518 G2E3Q7L622 706 aa25.54■■□□□ 1.68
CPNE7-202ENST00000319518 PROSER2Q86WR7 435 aaPredicted RBP25.54■■□□□ 1.68
CPNE7-202ENST00000319518 HAP1P54257 671 aaPredicted RBP25.54■■□□□ 1.68
CPNE7-202ENST00000319518 DNAJC5Q9H3Z4 198 aa25.54■■□□□ 1.68
CPNE7-202ENST00000319518 NFAT5O94916 1531 aa25.52■■□□□ 1.68
CPNE7-202ENST00000319518 F6X3S4 739 aa25.52■■□□□ 1.68
CPNE7-202ENST00000319518 KLHL40Q2TBA0 621 aa25.51■■□□□ 1.67
CPNE7-202ENST00000319518 IP6K1Q92551 441 aa25.51■■□□□ 1.67
CPNE7-202ENST00000319518 GNAT3A8MTJ3 354 aa25.51■■□□□ 1.67
CPNE7-202ENST00000319518 NBPF6Q5VWK0 638 aa25.51■■□□□ 1.67
CPNE7-202ENST00000319518 NBPF4Q96M43 638 aa25.51■■□□□ 1.67
CPNE7-202ENST00000319518 IL17REQ8NFR9 667 aa25.5■■□□□ 1.67
CPNE7-202ENST00000319518 ESPNB1AK53 854 aa25.49■■□□□ 1.67
CPNE7-202ENST00000319518 LRRC59Q96AG4 307 aaKnown RBP25.49■■□□□ 1.67
CPNE7-202ENST00000319518 ZGPATQ8N5A5 531 aaKnown RBP25.48■■□□□ 1.67
CPNE7-202ENST00000319518 DDX49Q9Y6V7 483 aaKnown RBP25.48■■□□□ 1.67
CPNE7-202ENST00000319518 GOLGA6L22H0YM25 854 aa25.48■■□□□ 1.67
CPNE7-202ENST00000319518 NECTIN2Q92692 538 aa25.47■■□□□ 1.67
CPNE7-202ENST00000319518 MCTP1Q6DN14 999 aa25.46■■□□□ 1.67
CPNE7-202ENST00000319518 SLC4A10Q6U841 1118 aa25.46■■□□□ 1.67
CPNE7-202ENST00000319518 MAP3K5Q99683 1374 aa25.46■■□□□ 1.67
CPNE7-202ENST00000319518 IBTKQ9P2D0 1353 aaPredicted RBP25.46■■□□□ 1.67
CPNE7-202ENST00000319518 OSBPL3Q9H4L5 887 aa25.46■■□□□ 1.67
CPNE7-202ENST00000319518 GCP02774 474 aa25.45■■□□□ 1.67
CPNE7-202ENST00000319518 PDE1AP54750 535 aa25.45■■□□□ 1.67
CPNE7-202ENST00000319518 NUCB2P80303 420 aa25.45■■□□□ 1.67
CPNE7-202ENST00000319518 LMBRD1Q9NUN5 540 aa25.45■■□□□ 1.67
CPNE7-202ENST00000319518 CASC1Q6TDU7 716 aa25.45■■□□□ 1.66
CPNE7-202ENST00000319518 ZDHHC9Q9Y397 364 aa25.45■■□□□ 1.66
CPNE7-202ENST00000319518 KCNH5Q8NCM2 988 aa25.44■■□□□ 1.66
CPNE7-202ENST00000319518 RGPD2P0DJD1 1756 aa25.44■■□□□ 1.66
CPNE7-202ENST00000319518 TSHZ3Q63HK5 1081 aa25.43■■□□□ 1.66
CPNE7-202ENST00000319518 DDX17Q92841 729 aaKnown RBP25.43■■□□□ 1.66
CPNE7-202ENST00000319518 SALL3Q9BXA9 1300 aa25.43■■□□□ 1.66
CPNE7-202ENST00000319518 ERC2O15083 957 aa25.43■■□□□ 1.66
CPNE7-202ENST00000319518 HTATSF1O43719 755 aaKnown RBP25.43■■□□□ 1.66
CPNE7-202ENST00000319518 REC8O95072 547 aa25.43■■□□□ 1.66
CPNE7-202ENST00000319518 KRT28Q7Z3Y7 464 aa25.43■■□□□ 1.66
CPNE7-202ENST00000319518 LRRC37A3O60309 1634 aa25.42■■□□□ 1.66
CPNE7-202ENST00000319518 ST18O60284 1047 aa25.42■■□□□ 1.66
CPNE7-202ENST00000319518 HMMRO75330 724 aa25.42■■□□□ 1.66
CPNE7-202ENST00000319518 EXOC6BQ9Y2D4 811 aa25.42■■□□□ 1.66
CPNE7-202ENST00000319518 CCT4P50991 539 aaKnown RBP25.41■■□□□ 1.66
CPNE7-202ENST00000319518 NAP1L5Q96NT1 182 aaPredicted RBP25.41■■□□□ 1.66
CPNE7-202ENST00000319518 CWC22Q9HCG8 908 aaKnown RBP25.41■■□□□ 1.66
CPNE7-202ENST00000319518 C1orf167Q5SNV9 1468 aa25.4■■□□□ 1.66
CPNE7-202ENST00000319518 NASPP49321 788 aaPredicted RBP25.4■■□□□ 1.66
CPNE7-202ENST00000319518 CHAMP1Q96JM3 812 aa25.4■■□□□ 1.66
CPNE7-202ENST00000319518 C19orf44Q9H6X5 657 aa25.4■■□□□ 1.66
CPNE7-202ENST00000319518 HSPA2P54652 639 aa25.39■■□□□ 1.66
CPNE7-202ENST00000319518 ARHGEF25Q86VW2 580 aa25.39■■□□□ 1.66
CPNE7-202ENST00000319518 TRIM44Q96DX7 344 aaPredicted RBP25.39■■□□□ 1.66
CPNE7-202ENST00000319518 LGR6Q9HBX8 967 aa25.39■■□□□ 1.66
CPNE7-202ENST00000319518 ZNF445P59923 1031 aa25.39■■□□□ 1.66
CPNE7-202ENST00000319518 PPP1R9BQ96SB3 815 aa25.39■■□□□ 1.66
CPNE7-202ENST00000319518 TUBGCP6Q96RT7 1819 aa25.39■■□□□ 1.65
CPNE7-202ENST00000319518 CAVIN1Q6NZI2 390 aaKnown RBP25.38■■□□□ 1.65
CPNE7-202ENST00000319518 AXIN2Q9Y2T1 843 aa25.38■■□□□ 1.65
CPNE7-202ENST00000319518 TAF7Q15545 349 aaPredicted RBP25.38■■□□□ 1.65
CPNE7-202ENST00000319518 GNAI2P04899 355 aa25.37■■□□□ 1.65
CPNE7-202ENST00000319518 ZSCAN23Q3MJ62 389 aa25.37■■□□□ 1.65
CPNE7-202ENST00000319518 PNMA6EA0A0J9YXQ4 647 aa25.37■■□□□ 1.65
CPNE7-202ENST00000319518 CCDC173Q0VFZ6 552 aa25.36■■□□□ 1.65
CPNE7-202ENST00000319518 GPT2Q8TD30 523 aa25.36■■□□□ 1.65
CPNE7-202ENST00000319518 TMEM94Q12767 1356 aa25.36■■□□□ 1.65
CPNE7-202ENST00000319518 TRPM3Q9HCF6 1732 aaPredicted RBP25.35■■□□□ 1.65
CPNE7-202ENST00000319518 ZC3H6P61129 1189 aaKnown RBP25.34■■□□□ 1.65
CPNE7-202ENST00000319518 FLIIQ13045 1269 aa25.34■■□□□ 1.65
CPNE7-202ENST00000319518 ANKRD24Q8TF21 1146 aa25.34■■□□□ 1.65
CPNE7-202ENST00000319518 STK31Q9BXU1 1019 aa25.34■■□□□ 1.65
CPNE7-202ENST00000319518 STRCP1A6NGW2 1772 aa25.34■■□□□ 1.65
CPNE7-202ENST00000319518 NCLP19338 710 aaKnown RBP25.34■■□□□ 1.65
CPNE7-202ENST00000319518 SLIT3O75094 1523 aa25.33■■□□□ 1.65
CPNE7-202ENST00000319518 PRPF40AO75400 957 aaKnown RBP25.33■■□□□ 1.65
CPNE7-202ENST00000319518 ESYT1Q9BSJ8 1104 aa25.33■■□□□ 1.65
CPNE7-202ENST00000319518 PALD1Q9ULE6 856 aa25.33■■□□□ 1.65
CPNE7-202ENST00000319518 TMX3Q96JJ7 454 aa25.33■■□□□ 1.64
CPNE7-202ENST00000319518 FAM208AQ9UK61 1670 aaKnown RBP25.33■■□□□ 1.64
CPNE7-202ENST00000319518 ATF3P18847 181 aa25.32■■□□□ 1.64
CPNE7-202ENST00000319518 NEK4P51957 841 aa25.32■■□□□ 1.64
CPNE7-202ENST00000319518 MPRIPQ6WCQ1 1025 aa25.32■■□□□ 1.64
CPNE7-202ENST00000319518 RBM27Q9P2N5 1060 aaKnown RBP25.32■■□□□ 1.64
CPNE7-202ENST00000319518 ZNF530Q6P9A1 599 aaPredicted RBP25.32■■□□□ 1.64
CPNE7-202ENST00000319518 LRRCC1Q9C099 1032 aa25.32■■□□□ 1.64
CPNE7-202ENST00000319518 KCNQ3O43525 872 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms