RNA–Protein interactions for RNA: ENST00000318809.11

LTBP4-204, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 1,700 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-204ENST00000318809 TAF7Q15545 349 aaPredicted RBP22.83■■□□□ 1.25
LTBP4-204ENST00000318809 NFATC2IPQ8NCF5 419 aa22.83■■□□□ 1.25
LTBP4-204ENST00000318809 TSR2Q969E8 191 aaKnown RBP22.83■■□□□ 1.25
LTBP4-204ENST00000318809 SIPA1L3O60292 1781 aaPredicted RBP22.82■■□□□ 1.24
LTBP4-204ENST00000318809 ERVV-2B6SEH9 535 aa22.82■■□□□ 1.24
LTBP4-204ENST00000318809 CHL1O00533 1208 aa22.82■■□□□ 1.24
LTBP4-204ENST00000318809 CABP4P57796 275 aa22.82■■□□□ 1.24
LTBP4-204ENST00000318809 GNAI1P63096 354 aa22.82■■□□□ 1.24
LTBP4-204ENST00000318809 DUSP27Q5VZP5 1158 aa22.82■■□□□ 1.24
LTBP4-204ENST00000318809 KRT27Q7Z3Y8 459 aa22.82■■□□□ 1.24
LTBP4-204ENST00000318809 MBIPQ9NS73 344 aa22.81■■□□□ 1.24
LTBP4-204ENST00000318809 FANCIQ9NVI1 1328 aa22.8■■□□□ 1.24
LTBP4-204ENST00000318809 DOT1LQ8TEK3 1739 aa22.8■■□□□ 1.24
LTBP4-204ENST00000318809 ACSBG1Q96GR2 724 aa22.79■■□□□ 1.24
LTBP4-204ENST00000318809 PRIM1P49642 420 aaKnown RBP22.79■■□□□ 1.24
LTBP4-204ENST00000318809 MYH16Q9H6N6 1097 aa22.79■■□□□ 1.24
LTBP4-204ENST00000318809 BTBD11A6QL63 1104 aa22.78■■□□□ 1.24
LTBP4-204ENST00000318809 TSPYL4Q9UJ04 414 aa22.78■■□□□ 1.24
LTBP4-204ENST00000318809 ITGB4P16144 1822 aa22.78■■□□□ 1.24
LTBP4-204ENST00000318809 KCNQ3O43525 872 aa22.77■■□□□ 1.24
LTBP4-204ENST00000318809 PIGBQ92521 554 aa22.77■■□□□ 1.24
LTBP4-204ENST00000318809 KAT6BQ8WYB5 2073 aa22.77■■□□□ 1.24
LTBP4-204ENST00000318809 BCL9O00512 1426 aa22.77■■□□□ 1.24
LTBP4-204ENST00000318809 KCNQ2O43526 872 aa22.77■■□□□ 1.23
LTBP4-204ENST00000318809 BABAM1Q9NWV8 329 aa22.77■■□□□ 1.23
LTBP4-204ENST00000318809 TMOD3Q9NYL9 352 aa22.77■■□□□ 1.23
LTBP4-204ENST00000318809 SUPT16HQ9Y5B9 1047 aaKnown RBP22.77■■□□□ 1.23
LTBP4-204ENST00000318809 EP400Q96L91 3159 aa22.76■■□□□ 1.23
LTBP4-204ENST00000318809 SLC39A6Q13433 755 aa22.76■■□□□ 1.23
LTBP4-204ENST00000318809 SYTL4Q96C24 671 aaPredicted RBP22.76■■□□□ 1.23
LTBP4-204ENST00000318809 PTF1AQ7RTS3 328 aa22.74■■□□□ 1.23
LTBP4-204ENST00000318809 KDM3BQ7LBC6 1761 aa22.74■■□□□ 1.23
LTBP4-204ENST00000318809 EXOSC9Q06265 439 aaKnown RBP22.73■■□□□ 1.23
LTBP4-204ENST00000318809 KRT24Q2M2I5 525 aa22.73■■□□□ 1.23
LTBP4-204ENST00000318809 ZNF790Q6PG37 636 aa22.72■■□□□ 1.23
LTBP4-204ENST00000318809 FAM196AQ6ZSG2 479 aa22.71■■□□□ 1.23
LTBP4-204ENST00000318809 C8orf58Q8NAV2 365 aa22.71■■□□□ 1.23
LTBP4-204ENST00000318809 ASAP1Q9ULH1 1129 aa22.71■■□□□ 1.23
LTBP4-204ENST00000318809 SBF2Q86WG5 1849 aa22.71■■□□□ 1.23
LTBP4-204ENST00000318809 EIF4A1P60842 406 aaKnown RBP22.7■■□□□ 1.22
LTBP4-204ENST00000318809 ATG3Q9NT62 314 aa22.7■■□□□ 1.22
LTBP4-204ENST00000318809 PAPPAQ13219 1627 aa22.69■■□□□ 1.22
LTBP4-204ENST00000318809 TSPYL6Q8N831 410 aa22.69■■□□□ 1.22
LTBP4-204ENST00000318809 NHSQ6T4R5 1651 aa22.69■■□□□ 1.22
LTBP4-204ENST00000318809 ELL2O00472 640 aaPredicted RBP22.68■■□□□ 1.22
LTBP4-204ENST00000318809 FKBP8Q14318 412 aa22.68■■□□□ 1.22
LTBP4-204ENST00000318809 ZNF496Q96IT1 587 aaPredicted RBP22.67■■□□□ 1.22
LTBP4-204ENST00000318809 TTC5Q8N0Z6 440 aa22.66■■□□□ 1.22
LTBP4-204ENST00000318809 HEG1Q9ULI3 1381 aa22.66■■□□□ 1.22
LTBP4-204ENST00000318809 KCPQ6ZWJ8 1503 aa22.65■■□□□ 1.22
LTBP4-204ENST00000318809 UBR2Q8IWV8 1755 aa22.65■■□□□ 1.22
LTBP4-204ENST00000318809 PTCD1O75127 700 aaKnown RBP22.64■■□□□ 1.21
LTBP4-204ENST00000318809 TRIM37O94972 964 aa22.64■■□□□ 1.21
LTBP4-204ENST00000318809 BCL11BQ9C0K0 894 aaPredicted RBP22.64■■□□□ 1.21
LTBP4-204ENST00000318809 RCAN3Q9UKA8 241 aa22.64■■□□□ 1.21
LTBP4-204ENST00000318809 BTAF1O14981 1849 aa22.64■■□□□ 1.21
LTBP4-204ENST00000318809 VAMP4O75379 141 aa22.63■■□□□ 1.21
LTBP4-204ENST00000318809 TWISTNBQ3B726 338 aaPredicted RBP22.63■■□□□ 1.21
LTBP4-204ENST00000318809 PRAMEF22A3QJZ6 481 aa22.62■■□□□ 1.21
LTBP4-204ENST00000318809 FMNL2Q96PY5 1086 aa22.62■■□□□ 1.21
LTBP4-204ENST00000318809 GIGYF1O75420 1035 aaPredicted RBP22.62■■□□□ 1.21
LTBP4-204ENST00000318809 ERICH6BQ5W0A0 696 aa22.62■■□□□ 1.21
LTBP4-204ENST00000318809 RNF123Q5XPI4 1314 aa22.6■■□□□ 1.21
LTBP4-204ENST00000318809 SLC4A9Q96Q91 983 aa22.6■■□□□ 1.21
LTBP4-204ENST00000318809 PALLDQ8WX93 1383 aa22.6■■□□□ 1.21
LTBP4-204ENST00000318809 RBM42Q9BTD8 480 aaKnown RBP22.6■■□□□ 1.21
LTBP4-204ENST00000318809 CT47B1P0C2W7 299 aaPredicted RBP22.59■■□□□ 1.21
LTBP4-204ENST00000318809 SMARCC1Q92922 1105 aaPredicted RBP22.58■■□□□ 1.21
LTBP4-204ENST00000318809 C5P01031 1676 aa22.58■■□□□ 1.2
LTBP4-204ENST00000318809 SNRPA1P09661 255 aaKnown RBP22.57■■□□□ 1.2
LTBP4-204ENST00000318809 HOXB7P09629 217 aa22.57■■□□□ 1.2
LTBP4-204ENST00000318809 USP16Q9Y5T5 823 aa22.57■■□□□ 1.2
LTBP4-204ENST00000318809 TCERG1O14776 1098 aaKnown RBP22.56■■□□□ 1.2
LTBP4-204ENST00000318809 RARSP54136 660 aaKnown RBP22.56■■□□□ 1.2
LTBP4-204ENST00000318809 NECTIN2Q92692 538 aa22.56■■□□□ 1.2
LTBP4-204ENST00000318809 SOS1Q07889 1333 aaPredicted RBP22.55■■□□□ 1.2
LTBP4-204ENST00000318809 LOC102724428A0A0B4J2F2 783 aa22.55■■□□□ 1.2
LTBP4-204ENST00000318809 SIK1P57059 783 aa22.55■■□□□ 1.2
LTBP4-204ENST00000318809 EIF2S2P20042 333 aaKnown RBP22.54■■□□□ 1.2
LTBP4-204ENST00000318809 VSIG10Q8N0Z9 540 aa22.54■■□□□ 1.2
LTBP4-204ENST00000318809 SSH1Q8WYL5 1049 aa22.54■■□□□ 1.2
LTBP4-204ENST00000318809 BCL2L13Q9BXK5 485 aa22.54■■□□□ 1.2
LTBP4-204ENST00000318809 HDGFL1Q5TGJ6 251 aa22.54■■□□□ 1.2
LTBP4-204ENST00000318809 DNAJC10Q8IXB1 793 aa22.54■■□□□ 1.2
LTBP4-204ENST00000318809 BCAR3O75815 825 aa22.53■■□□□ 1.2
LTBP4-204ENST00000318809 KCNQ4P56696 695 aa22.52■■□□□ 1.2
LTBP4-204ENST00000318809 ZNF428Q96B54 188 aa22.52■■□□□ 1.2
LTBP4-204ENST00000318809 TNS1Q9HBL0 1735 aaKnown RBP22.52■■□□□ 1.2
LTBP4-204ENST00000318809 ATP6V1AP38606 617 aa22.51■■□□□ 1.19
LTBP4-204ENST00000318809 RRP1P56182 461 aaKnown RBP22.51■■□□□ 1.19
LTBP4-204ENST00000318809 ITPK1Q13572 414 aa22.51■■□□□ 1.19
LTBP4-204ENST00000318809 TJP1Q07157 1748 aa22.51■■□□□ 1.19
LTBP4-204ENST00000318809 APBA3O96018 575 aa22.51■■□□□ 1.19
LTBP4-204ENST00000318809 LY75O60449 1722 aa22.5■■□□□ 1.19
LTBP4-204ENST00000318809 ALDH1L2Q3SY69 923 aa22.5■■□□□ 1.19
LTBP4-204ENST00000318809 LAMB4A4D0S4 1761 aa22.5■■□□□ 1.19
LTBP4-204ENST00000318809 IRX6P78412 446 aaPredicted RBP22.49■■□□□ 1.19
LTBP4-204ENST00000318809 CCDC30Q5VVM6 783 aa22.49■■□□□ 1.19
LTBP4-204ENST00000318809 SMC4Q9NTJ3 1288 aa22.49■■□□□ 1.19
LTBP4-204ENST00000318809 MRPL50Q8N5N7 158 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms