RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 MSH5O43196 834 aa38.95■■■■□ 3.83
SYNGR1-202ENST00000318801 AK7Q96M32 723 aa38.95■■■■□ 3.83
SYNGR1-202ENST00000318801 QSER1Q2KHR3 1735 aa38.95■■■■□ 3.83
SYNGR1-202ENST00000318801 PNPLA7Q6ZV29 1317 aa38.95■■■■□ 3.83
SYNGR1-202ENST00000318801 RBM42Q9BTD8 480 aaKnown RBP38.95■■■■□ 3.83
SYNGR1-202ENST00000318801 FCHSD2O94868 740 aa38.93■■■■□ 3.82
SYNGR1-202ENST00000318801 TAF1LQ8IZX4 1826 aa38.92■■■■□ 3.82
SYNGR1-202ENST00000318801 SCN11AQ9UI33 1791 aa38.92■■■■□ 3.82
SYNGR1-202ENST00000318801 PRKAR2BP31323 418 aa38.92■■■■□ 3.82
SYNGR1-202ENST00000318801 RNMTO43148 476 aaKnown RBP38.91■■■■□ 3.82
SYNGR1-202ENST00000318801 NEFMP07197 916 aa38.9■■■■□ 3.82
SYNGR1-202ENST00000318801 SLC52A2Q9HAB3 445 aa38.9■■■■□ 3.82
SYNGR1-202ENST00000318801 LGR6Q9HBX8 967 aa38.9■■■■□ 3.82
SYNGR1-202ENST00000318801 GNAT3A8MTJ3 354 aa38.89■■■■□ 3.82
SYNGR1-202ENST00000318801 RSPH6AQ9H0K4 717 aa38.89■■■■□ 3.82
SYNGR1-202ENST00000318801 PTGER2P43116 358 aa38.87■■■■□ 3.81
SYNGR1-202ENST00000318801 POLD1P28340 1107 aa38.86■■■■□ 3.81
SYNGR1-202ENST00000318801 C4BP0C0L5 1744 aa38.85■■■■□ 3.81
SYNGR1-202ENST00000318801 PTCD1O75127 700 aaKnown RBP38.84■■■■□ 3.81
SYNGR1-202ENST00000318801 COL23A1Q86Y22 540 aaPredicted RBP38.84■■■■□ 3.81
SYNGR1-202ENST00000318801 MAP3K5Q99683 1374 aa38.84■■■■□ 3.81
SYNGR1-202ENST00000318801 LINC00116Q8NCU8 138 aa38.83■■■■□ 3.81
SYNGR1-202ENST00000318801 TUBGCP6Q96RT7 1819 aa38.83■■■■□ 3.81
SYNGR1-202ENST00000318801 ITPK1Q13572 414 aa38.82■■■■□ 3.81
SYNGR1-202ENST00000318801 PNNQ9H307 717 aaKnown RBP38.82■■■■□ 3.81
SYNGR1-202ENST00000318801 TEFQ10587 303 aa38.82■■■■□ 3.8
SYNGR1-202ENST00000318801 PHACTR3Q96KR7 559 aa38.82■■■■□ 3.8
SYNGR1-202ENST00000318801 ARXQ96QS3 562 aa38.8■■■■□ 3.8
SYNGR1-202ENST00000318801 VIRMAQ69YN4 1812 aaKnown RBP38.79■■■■□ 3.8
SYNGR1-202ENST00000318801 DCAF8L1A6NGE4 600 aa38.79■■■■□ 3.8
SYNGR1-202ENST00000318801 SSFA2P28290 1259 aa38.79■■■■□ 3.8
SYNGR1-202ENST00000318801 GNPATO15228 680 aa38.78■■■■□ 3.8
SYNGR1-202ENST00000318801 ZNF831Q5JPB2 1677 aa38.78■■■■□ 3.8
SYNGR1-202ENST00000318801 RTF1Q92541 710 aaKnown RBP38.78■■■■□ 3.8
SYNGR1-202ENST00000318801 SGIP1Q9BQI5 828 aa38.78■■■■□ 3.8
SYNGR1-202ENST00000318801 PHF14O94880 888 aa38.77■■■■□ 3.8
SYNGR1-202ENST00000318801 MYBBP1AQ9BQG0 1328 aaKnown RBP38.76■■■■□ 3.8
SYNGR1-202ENST00000318801 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP38.76■■■■□ 3.8
SYNGR1-202ENST00000318801 RC3H1Q5TC82 1133 aaKnown RBP38.76■■■■□ 3.8
SYNGR1-202ENST00000318801 RTCBQ9Y3I0 505 aaKnown RBP38.75■■■■□ 3.79
SYNGR1-202ENST00000318801 SLC4A9Q96Q91 983 aa38.74■■■■□ 3.79
SYNGR1-202ENST00000318801 MRC1P22897 1456 aa38.74■■■■□ 3.79
SYNGR1-202ENST00000318801 TTC5Q8N0Z6 440 aa38.73■■■■□ 3.79
SYNGR1-202ENST00000318801 IL17REQ8NFR9 667 aa38.73■■■■□ 3.79
SYNGR1-202ENST00000318801 ADAMTS7Q9UKP4 1686 aa38.72■■■■□ 3.79
SYNGR1-202ENST00000318801 UBR3Q6ZT12 1888 aa38.71■■■■□ 3.79
SYNGR1-202ENST00000318801 TRAPPC3LQ5T215 181 aa38.7■■■■□ 3.79
SYNGR1-202ENST00000318801 CNTNAP4Q9C0A0 1308 aa38.7■■■■□ 3.79
SYNGR1-202ENST00000318801 SLC39A6Q13433 755 aa38.7■■■■□ 3.78
SYNGR1-202ENST00000318801 FHDC1Q9C0D6 1143 aaPredicted RBP38.69■■■■□ 3.78
SYNGR1-202ENST00000318801 HTATSF1O43719 755 aaKnown RBP38.68■■■■□ 3.78
SYNGR1-202ENST00000318801 ADRA2BP18089 450 aa38.67■■■■□ 3.78
SYNGR1-202ENST00000318801 MAPK8IP3Q9UPT6 1336 aa38.66■■■■□ 3.78
SYNGR1-202ENST00000318801 RPS6KA4O75676 772 aa38.65■■■■□ 3.78
SYNGR1-202ENST00000318801 MSL1Q68DK7 614 aa38.65■■■■□ 3.78
SYNGR1-202ENST00000318801 SYT17Q9BSW7 474 aa38.65■■■■□ 3.78
SYNGR1-202ENST00000318801 ZNF316A6NFI3 1004 aaPredicted RBP38.64■■■■□ 3.78
SYNGR1-202ENST00000318801 VSIG10Q8N0Z9 540 aa38.64■■■■□ 3.78
SYNGR1-202ENST00000318801 CRKLP46109 303 aaKnown RBP38.63■■■■□ 3.77
SYNGR1-202ENST00000318801 CEMIPQ8WUJ3 1361 aa38.62■■■■□ 3.77
SYNGR1-202ENST00000318801 COL5A3P25940 1745 aaPredicted RBP38.62■■■■□ 3.77
SYNGR1-202ENST00000318801 AMIGO3Q86WK7 504 aa38.62■■■■□ 3.77
SYNGR1-202ENST00000318801 KLHL34Q8N239 644 aa38.62■■■■□ 3.77
SYNGR1-202ENST00000318801 PRKRIP1Q9H875 184 aaPredicted RBP38.62■■■■□ 3.77
SYNGR1-202ENST00000318801 COL24A1Q17RW2 1714 aa38.61■■■■□ 3.77
SYNGR1-202ENST00000318801 RFC4P35249 363 aa38.61■■■■□ 3.77
SYNGR1-202ENST00000318801 ZNF790Q6PG37 636 aa38.61■■■■□ 3.77
SYNGR1-202ENST00000318801 BTBD11A6QL63 1104 aa38.6■■■■□ 3.77
SYNGR1-202ENST00000318801 SMIM5Q71RC9 77 aa38.6■■■■□ 3.77
SYNGR1-202ENST00000318801 DNAJC10Q8IXB1 793 aa38.59■■■■□ 3.77
SYNGR1-202ENST00000318801 MCM10Q7L590 875 aa38.58■■■■□ 3.77
SYNGR1-202ENST00000318801 PLEKHF1Q96S99 279 aa38.58■■■■□ 3.77
SYNGR1-202ENST00000318801 WDR43Q15061 677 aaKnown RBP eCLIP38.57■■■■□ 3.77
SYNGR1-202ENST00000318801 TEX13AQ9BXU3 409 aaPredicted RBP38.57■■■■□ 3.77
SYNGR1-202ENST00000318801 STARD3NLO95772 234 aa38.57■■■■□ 3.76
SYNGR1-202ENST00000318801 ARHGEF1Q92888 912 aaKnown RBP38.57■■■■□ 3.76
SYNGR1-202ENST00000318801 CCDC87Q9NVE4 849 aa38.57■■■■□ 3.76
SYNGR1-202ENST00000318801 NFE2L2Q16236 605 aa38.55■■■■□ 3.76
SYNGR1-202ENST00000318801 NLGN1Q8N2Q7 840 aa38.55■■■■□ 3.76
SYNGR1-202ENST00000318801 FMNL2Q96PY5 1086 aa38.55■■■■□ 3.76
SYNGR1-202ENST00000318801 MYH14Q7Z406 1995 aaKnown RBP38.54■■■■□ 3.76
SYNGR1-202ENST00000318801 CICQ96RK0 1608 aaPredicted RBP38.54■■■■□ 3.76
SYNGR1-202ENST00000318801 KCPQ6ZWJ8 1503 aa38.53■■■■□ 3.76
SYNGR1-202ENST00000318801 CYP19A1P11511 503 aaPredicted RBP38.53■■■■□ 3.76
SYNGR1-202ENST00000318801 TJP1Q07157 1748 aa38.53■■■■□ 3.76
SYNGR1-202ENST00000318801 ZNF496Q96IT1 587 aaPredicted RBP38.52■■■■□ 3.76
SYNGR1-202ENST00000318801 SIPA1L3O60292 1781 aaPredicted RBP38.52■■■■□ 3.76
SYNGR1-202ENST00000318801 INTS5Q6P9B9 1019 aaKnown RBP38.51■■■■□ 3.76
SYNGR1-202ENST00000318801 DCTN1Q14203 1278 aa38.5■■■■□ 3.75
SYNGR1-202ENST00000318801 TAF7Q15545 349 aaPredicted RBP38.5■■■■□ 3.75
SYNGR1-202ENST00000318801 UBR2Q8IWV8 1755 aa38.49■■■■□ 3.75
SYNGR1-202ENST00000318801 HEG1Q9ULI3 1381 aa38.48■■■■□ 3.75
SYNGR1-202ENST00000318801 PNISRQ8TF01 805 aaKnown RBP38.45■■■■□ 3.75
SYNGR1-202ENST00000318801 CD2APQ9Y5K6 639 aa38.45■■■■□ 3.75
SYNGR1-202ENST00000318801 ZPR1O75312 459 aa38.44■■■■□ 3.74
SYNGR1-202ENST00000318801 DLG5Q8TDM6 1919 aa38.44■■■■□ 3.74
SYNGR1-202ENST00000318801 NPM2Q86SE8 214 aaKnown RBP38.44■■■■□ 3.74
SYNGR1-202ENST00000318801 LMOD3Q0VAK6 560 aa38.43■■■■□ 3.74
SYNGR1-202ENST00000318801 MMP10P09238 476 aa38.42■■■■□ 3.74
SYNGR1-202ENST00000318801 GYS1P13807 737 aa38.42■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms