RNA–Protein interactions for RNA: ENST00000318561.7

SFTPC-201, Transcript of surfactant protein C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFTPC, Length 997 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPC-201ENST00000318561 CFAP53Q96M91 514 aa22.77■■□□□ 1.24
SFTPC-201ENST00000318561 NMRK2Q9NPI5 230 aa22.77■■□□□ 1.24
SFTPC-201ENST00000318561 COL3A1P02461 1466 aaPredicted RBP22.77■■□□□ 1.24
SFTPC-201ENST00000318561 WDR90Q96KV7 1748 aa22.75■■□□□ 1.23
SFTPC-201ENST00000318561 ZCRB1Q8TBF4 217 aaKnown RBP22.74■■□□□ 1.23
SFTPC-201ENST00000318561 PKD1L3Q7Z443 1732 aa22.73■■□□□ 1.23
SFTPC-201ENST00000318561 LY75O60449 1722 aa22.72■■□□□ 1.23
SFTPC-201ENST00000318561 RBM46Q8TBY0 533 aaKnown RBP22.72■■□□□ 1.23
SFTPC-201ENST00000318561 SULT6B1Q6IMI4 303 aa22.7■■□□□ 1.22
SFTPC-201ENST00000318561 PLEKHG2Q9H7P9 1386 aa22.7■■□□□ 1.22
SFTPC-201ENST00000318561 KDRP35968 1356 aa22.69■■□□□ 1.22
SFTPC-201ENST00000318561 MYBBP1AQ9BQG0 1328 aaKnown RBP22.69■■□□□ 1.22
SFTPC-201ENST00000318561 AEBP1Q8IUX7 1158 aa22.69■■□□□ 1.22
SFTPC-201ENST00000318561 PCDH11XQ9BZA7 1347 aa22.68■■□□□ 1.22
SFTPC-201ENST00000318561 PCDH11YQ9BZA8 1340 aa22.68■■□□□ 1.22
SFTPC-201ENST00000318561 FLAD1Q8NFF5 587 aa22.68■■□□□ 1.22
SFTPC-201ENST00000318561 PRKRIP1Q9H875 184 aaPredicted RBP22.68■■□□□ 1.22
SFTPC-201ENST00000318561 SPG7Q9UQ90 795 aa22.68■■□□□ 1.22
SFTPC-201ENST00000318561 NUDCQ9Y266 331 aa22.68■■□□□ 1.22
SFTPC-201ENST00000318561 CICQ96RK0 1608 aaPredicted RBP22.68■■□□□ 1.22
SFTPC-201ENST00000318561 U2SURPO15042 1029 aaKnown RBP22.67■■□□□ 1.22
SFTPC-201ENST00000318561 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.67■■□□□ 1.22
SFTPC-201ENST00000318561 PCNTO95613 3336 aa22.66■■□□□ 1.22
SFTPC-201ENST00000318561 AMIGO3Q86WK7 504 aa22.66■■□□□ 1.22
SFTPC-201ENST00000318561 HMOX1P09601 288 aa22.65■■□□□ 1.22
SFTPC-201ENST00000318561 C16orf71Q8IYS4 520 aaPredicted RBP22.65■■□□□ 1.22
SFTPC-201ENST00000318561 DOT1LQ8TEK3 1739 aa22.65■■□□□ 1.22
SFTPC-201ENST00000318561 FSTL1Q12841 308 aa22.64■■□□□ 1.21
SFTPC-201ENST00000318561 PLEKHO1Q53GL0 409 aaPredicted RBP22.64■■□□□ 1.21
SFTPC-201ENST00000318561 SMIM5Q71RC9 77 aa22.64■■□□□ 1.21
SFTPC-201ENST00000318561 HSPA1AP0DMV8 641 aaKnown RBP22.63■■□□□ 1.21
SFTPC-201ENST00000318561 HSPA1BP0DMV9 641 aaKnown RBP22.63■■□□□ 1.21
SFTPC-201ENST00000318561 CYP27B1O15528 508 aa22.62■■□□□ 1.21
SFTPC-201ENST00000318561 AMOTQ4VCS5 1084 aa22.62■■□□□ 1.21
SFTPC-201ENST00000318561 PHF14O94880 888 aa22.6■■□□□ 1.21
SFTPC-201ENST00000318561 U2AF1L5P0DN76 240 aaPredicted RBP22.6■■□□□ 1.21
SFTPC-201ENST00000318561 U2AF1Q01081 240 aaKnown RBP eCLIP22.6■■□□□ 1.21
SFTPC-201ENST00000318561 ARHGAP27Q6ZUM4 889 aa22.59■■□□□ 1.21
SFTPC-201ENST00000318561 IFNL2Q8IZJ0 200 aa22.59■■□□□ 1.21
SFTPC-201ENST00000318561 BCS1LQ9Y276 419 aa22.59■■□□□ 1.21
SFTPC-201ENST00000318561 ANP32CO43423 234 aa22.58■■□□□ 1.21
SFTPC-201ENST00000318561 PHKG2P15735 406 aa22.58■■□□□ 1.21
SFTPC-201ENST00000318561 ZNF530Q6P9A1 599 aaPredicted RBP22.58■■□□□ 1.21
SFTPC-201ENST00000318561 AK7Q96M32 723 aa22.57■■□□□ 1.2
SFTPC-201ENST00000318561 C5P01031 1676 aa22.57■■□□□ 1.2
SFTPC-201ENST00000318561 PXDNLA1KZ92 1463 aa22.56■■□□□ 1.2
SFTPC-201ENST00000318561 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.56■■□□□ 1.2
SFTPC-201ENST00000318561 NKX1-1Q15270 411 aaPredicted RBP22.56■■□□□ 1.2
SFTPC-201ENST00000318561 ITGB4P16144 1822 aa22.55■■□□□ 1.2
SFTPC-201ENST00000318561 PALLDQ8WX93 1383 aa22.55■■□□□ 1.2
SFTPC-201ENST00000318561 TOGARAM1Q9Y4F4 1720 aa22.55■■□□□ 1.2
SFTPC-201ENST00000318561 C1orf141Q5JVX7 400 aa22.55■■□□□ 1.2
SFTPC-201ENST00000318561 RSPH6AQ9H0K4 717 aa22.55■■□□□ 1.2
SFTPC-201ENST00000318561 FCHSD2O94868 740 aa22.54■■□□□ 1.2
SFTPC-201ENST00000318561 HSP90AB1P08238 724 aaKnown RBP22.54■■□□□ 1.2
SFTPC-201ENST00000318561 PRKAR2BP31323 418 aa22.54■■□□□ 1.2
SFTPC-201ENST00000318561 C9orf131Q5VYM1 1079 aa22.54■■□□□ 1.2
SFTPC-201ENST00000318561 A0A0G2JLW4 131 aa22.52■■□□□ 1.2
SFTPC-201ENST00000318561 RRAGCQ9HB90 399 aa22.52■■□□□ 1.2
SFTPC-201ENST00000318561 VIRMAQ69YN4 1812 aaKnown RBP22.52■■□□□ 1.2
SFTPC-201ENST00000318561 KCPQ6ZWJ8 1503 aa22.52■■□□□ 1.19
SFTPC-201ENST00000318561 HMGB2P26583 209 aaKnown RBP22.51■■□□□ 1.19
SFTPC-201ENST00000318561 MTHFSDQ2M296 383 aaKnown RBP22.5■■□□□ 1.19
SFTPC-201ENST00000318561 AKAP4Q5JQC9 854 aa22.5■■□□□ 1.19
SFTPC-201ENST00000318561 DCAF5Q96JK2 942 aa22.5■■□□□ 1.19
SFTPC-201ENST00000318561 C4BP0C0L5 1744 aa22.5■■□□□ 1.19
SFTPC-201ENST00000318561 SCN11AQ9UI33 1791 aa22.5■■□□□ 1.19
SFTPC-201ENST00000318561 MMP10P09238 476 aa22.49■■□□□ 1.19
SFTPC-201ENST00000318561 TGFB2P61812 414 aa22.49■■□□□ 1.19
SFTPC-201ENST00000318561 SMC1BQ8NDV3 1235 aa22.49■■□□□ 1.19
SFTPC-201ENST00000318561 GAS2L2Q8NHY3 880 aa22.49■■□□□ 1.19
SFTPC-201ENST00000318561 SSFA2P28290 1259 aa22.48■■□□□ 1.19
SFTPC-201ENST00000318561 KDM2BQ8NHM5 1336 aa22.48■■□□□ 1.19
SFTPC-201ENST00000318561 KDM6AO15550 1401 aaPredicted RBP22.48■■□□□ 1.19
SFTPC-201ENST00000318561 NEFMP07197 916 aa22.47■■□□□ 1.19
SFTPC-201ENST00000318561 WDR43Q15061 677 aaKnown RBP eCLIP22.47■■□□□ 1.19
SFTPC-201ENST00000318561 MPRIPQ6WCQ1 1025 aa22.47■■□□□ 1.19
SFTPC-201ENST00000318561 PHACTR3Q96KR7 559 aa22.47■■□□□ 1.19
SFTPC-201ENST00000318561 PNNQ9H307 717 aaKnown RBP22.47■■□□□ 1.19
SFTPC-201ENST00000318561 DPEP1P16444 411 aa22.46■■□□□ 1.19
SFTPC-201ENST00000318561 C10orf71Q711Q0 1435 aa22.46■■□□□ 1.19
SFTPC-201ENST00000318561 ERVV-2B6SEH9 535 aa22.45■■□□□ 1.18
SFTPC-201ENST00000318561 TMOD3Q9NYL9 352 aa22.45■■□□□ 1.18
SFTPC-201ENST00000318561 KIAA1551Q9HCM1 1747 aa22.45■■□□□ 1.18
SFTPC-201ENST00000318561 TAF1LQ8IZX4 1826 aa22.45■■□□□ 1.18
SFTPC-201ENST00000318561 LINC00116Q8NCU8 138 aa22.43■■□□□ 1.18
SFTPC-201ENST00000318561 PIGBQ92521 554 aa22.43■■□□□ 1.18
SFTPC-201ENST00000318561 PLEKHF1Q96S99 279 aa22.43■■□□□ 1.18
SFTPC-201ENST00000318561 PCDH10Q9P2E7 1040 aa22.43■■□□□ 1.18
SFTPC-201ENST00000318561 ADAMTS7Q9UKP4 1686 aa22.42■■□□□ 1.18
SFTPC-201ENST00000318561 DLG5Q8TDM6 1919 aa22.42■■□□□ 1.18
SFTPC-201ENST00000318561 SMARCC1Q92922 1105 aaPredicted RBP22.42■■□□□ 1.18
SFTPC-201ENST00000318561 RNF181Q9P0P0 153 aa22.42■■□□□ 1.18
SFTPC-201ENST00000318561 UBR3Q6ZT12 1888 aa22.42■■□□□ 1.18
SFTPC-201ENST00000318561 N4BP2Q86UW6 1770 aaPredicted RBP22.41■■□□□ 1.18
SFTPC-201ENST00000318561 MAPK8IP3Q9UPT6 1336 aa22.41■■□□□ 1.18
SFTPC-201ENST00000318561 GNAT3A8MTJ3 354 aa22.41■■□□□ 1.18
SFTPC-201ENST00000318561 RNMTO43148 476 aaKnown RBP22.41■■□□□ 1.18
SFTPC-201ENST00000318561 CABP4P57796 275 aa22.41■■□□□ 1.18
SFTPC-201ENST00000318561 CCDC184Q52MB2 194 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms